RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 KIR3DL3Q8N743 410 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 CTSZQ9UBR2 303 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 HIVEP2P31629 2446 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 NPFFO15130 113 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 GUSBP1Q15486 140 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 OR10J6PQ8NGY7 276 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 PARD6GQ9BYG4 376 aaPredicted RBP11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 TRAV5A0A0B4J249 113 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 TMEM189A5PLL7 270 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 PEX7O00628 323 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 LHBP01229 141 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 ADORA2A-AS1P86434 159 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 IL15RAQ13261 267 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 C1QL4Q86Z23 238 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 OR5AN1Q8NGI8 311 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 AGMATQ9BSE5 352 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 KAAG1Q9UBP8 84 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 FREM2Q5SZK8 3169 aa11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 SERF1AO75920 110 aa11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 APCSP02743 223 aa11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 RNASE2P10153 161 aaKnown RBP11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 PSG9Q00887 426 aa11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 SPATA31B1PQ5VZV4 182 aa11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 GSX1Q9H4S2 264 aaPredicted RBP11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 H3BUX3 64 aa11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 GZMBP10144 247 aa11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 FAM71F2Q6NXP2 309 aa11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 SETD2Q9BYW2 2564 aaPredicted RBP11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 STAG3L2P0CL84 134 aa11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 STAG3L3P0CL85 134 aa11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 FOXA3P55318 350 aaPredicted RBP11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 DIAPH2-AS1Q14236 149 aa11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.5□□□□□ -0.57
SHROOM1-203ENST00000378679 FRYQ5TBA9 3013 aa11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 SH2D7A6NKC9 451 aaPredicted RBP11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 BEND2Q8NDZ0 799 aa11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 OR4B1Q8NGF8 309 aa11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 TRAV1-1A0A0B4J248 108 aa11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 IGHV2-5P01817 119 aa11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 NUTF2P61970 127 aaKnown RBP11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 SPANXN1Q5VSR9 72 aa11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 C22orf34Q6ZV56 151 aa11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 A0A1W2PPI3 338 aa11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 OR5AL1P0C617 328 aa11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 PSG1P11464 419 aa11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 CD99P14209 185 aa11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 RBPMS2Q6ZRY4 209 aaKnown RBP11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 DERL1Q9BUN8 251 aa11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 TMEM14BQ9NUH8 114 aa11.49□□□□□ -0.57
SHROOM1-203ENST00000378679 FASNP49327 2511 aaKnown RBP11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 A0A087WWC5 75 aa11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 HLA-DRB1P01911 266 aa11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 PVRIGQ6DKI7 326 aa11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 GTF2H5Q6ZYL4 71 aa11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 MAPK1IP1LQ8NDC0 245 aa11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 PGLYRP4Q96LB8 373 aa11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 F11RQ9Y624 299 aaKnown RBP11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 C22orf46C9J442 243 aa11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 CNTFRP26992 372 aa11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 YAE1D1Q9NRH1 226 aa11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 MT-ND6P03923 174 aa11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 PRB1P04280 392 aa11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 EBLN2Q6P2I7 272 aa11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 Q9H3A6 140 aa11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 TBL2Q9Y4P3 447 aaKnown RBP11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 KLF2Q9Y5W3 355 aaPredicted RBP11.48□□□□□ -0.57
SHROOM1-203ENST00000378679 A0A1W2PRE2 83 aa11.47□□□□□ -0.57
SHROOM1-203ENST00000378679 C15orf32Q32M92 178 aa11.47□□□□□ -0.57
SHROOM1-203ENST00000378679 ZNF833PQ6ZTB9 187 aa11.47□□□□□ -0.57
SHROOM1-203ENST00000378679 RAB37Q96AX2 223 aa11.47□□□□□ -0.57
SHROOM1-203ENST00000378679 NPFFR1Q9GZQ6 430 aa11.47□□□□□ -0.57
SHROOM1-203ENST00000378679 MOB4Q9Y3A3 225 aa11.47□□□□□ -0.57
SHROOM1-203ENST00000378679 GNG5P63218 68 aa11.47□□□□□ -0.57
SHROOM1-203ENST00000378679 PMCHL2Q9BQD1 86 aa11.47□□□□□ -0.57
SHROOM1-203ENST00000378679 SRRM4A7MD48 611 aaKnown RBP11.46□□□□□ -0.57
SHROOM1-203ENST00000378679 LINC00311Q8N616 119 aa11.46□□□□□ -0.57
SHROOM1-203ENST00000378679 UQCR10Q9UDW1 63 aa11.46□□□□□ -0.57
SHROOM1-203ENST00000378679 A0A1B0GWJ7 208 aa11.46□□□□□ -0.57
SHROOM1-203ENST00000378679 ADMP35318 185 aa11.46□□□□□ -0.57
SHROOM1-203ENST00000378679 TEX38Q6PEX7 206 aa11.46□□□□□ -0.57
SHROOM1-203ENST00000378679 DUX5Q96PT3 197 aa11.46□□□□□ -0.57
SHROOM1-203ENST00000378679 SPSB3Q6PJ21 355 aa11.46□□□□□ -0.58
SHROOM1-203ENST00000378679 CRIP3Q6Q6R5 217 aa11.46□□□□□ -0.58
SHROOM1-203ENST00000378679 TRAV41A0A0B4J266 112 aa11.45□□□□□ -0.58
SHROOM1-203ENST00000378679 HLA-DQA1P01909 254 aa11.45□□□□□ -0.58
SHROOM1-203ENST00000378679 VDAC2P45880 294 aaPredicted RBP11.45□□□□□ -0.58
SHROOM1-203ENST00000378679 SNHG12Q9BXW3 62 aa11.45□□□□□ -0.58
SHROOM1-203ENST00000378679 PLA2G2EQ9NZK7 142 aa11.45□□□□□ -0.58
SHROOM1-203ENST00000378679 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.45□□□□□ -0.58
SHROOM1-203ENST00000378679 IGKV3-20P01619 116 aa11.45□□□□□ -0.58
SHROOM1-203ENST00000378679 GPR82Q96P67 336 aa11.45□□□□□ -0.58
SHROOM1-203ENST00000378679 PRSS22Q9GZN4 317 aa11.45□□□□□ -0.58
SHROOM1-203ENST00000378679 UBE2E1P51965 193 aa11.45□□□□□ -0.58
SHROOM1-203ENST00000378679 SAPCD1Q5SSQ6 148 aa11.45□□□□□ -0.58
SHROOM1-203ENST00000378679 OR8A1Q8NGG7 326 aa11.45□□□□□ -0.58
SHROOM1-203ENST00000378679 PRDM13Q9H4Q3 707 aa11.45□□□□□ -0.58
SHROOM1-203ENST00000378679 NDUFS8O00217 210 aa11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 MSMBP08118 114 aa11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 NPSP0C0P6 89 aa11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 HIST1H1AQ02539 215 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms