RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 HLA-DRB4X5D2U9 266 aa9.87□□□□□ -0.83
TNFRSF1A-202ENST00000366159 PMS2P5A8MQ11 134 aa9.86□□□□□ -0.83
TNFRSF1A-202ENST00000366159 LYZP61626 148 aa9.86□□□□□ -0.83
TNFRSF1A-202ENST00000366159 OR2F1Q13607 317 aa9.86□□□□□ -0.83
TNFRSF1A-202ENST00000366159 SAV1Q9H4B6 383 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF1A-202ENST00000366159 SLC45A2Q9UMX9 530 aa9.86□□□□□ -0.83
TNFRSF1A-202ENST00000366159 C11orf94C9JXX5 98 aa9.85□□□□□ -0.83
TNFRSF1A-202ENST00000366159 CFDP00746 253 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF1A-202ENST00000366159 OR4E1P0C645 316 aa9.85□□□□□ -0.83
TNFRSF1A-202ENST00000366159 PSMB3P49720 205 aa9.85□□□□□ -0.83
TNFRSF1A-202ENST00000366159 TCTAP57738 103 aa9.85□□□□□ -0.83
TNFRSF1A-202ENST00000366159 DEFB1P60022 68 aa9.85□□□□□ -0.83
TNFRSF1A-202ENST00000366159 NUTF2P61970 127 aaKnown RBP9.85□□□□□ -0.83
TNFRSF1A-202ENST00000366159 SPANXN5Q5MJ07 72 aa9.85□□□□□ -0.83
TNFRSF1A-202ENST00000366159 ZNF705AQ6ZN79 300 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF1A-202ENST00000366159 RPP25LQ8N5L8 163 aaKnown RBP9.85□□□□□ -0.83
TNFRSF1A-202ENST00000366159 C2CD4CQ8TF44 421 aa9.85□□□□□ -0.83
TNFRSF1A-202ENST00000366159 C1QTNF4Q9BXJ3 329 aa9.85□□□□□ -0.83
TNFRSF1A-202ENST00000366159 APLNQ9ULZ1 77 aa9.85□□□□□ -0.83
TNFRSF1A-202ENST00000366159 PAX9P55771 341 aa9.84□□□□□ -0.83
TNFRSF1A-202ENST00000366159 POLR2GP62487 172 aaKnown RBP eCLIP9.84□□□□□ -0.83
TNFRSF1A-202ENST00000366159 GSG1LQ6UXU4 331 aa9.84□□□□□ -0.83
TNFRSF1A-202ENST00000366159 FOXI2Q6ZQN5 318 aa9.84□□□□□ -0.83
TNFRSF1A-202ENST00000366159 TMEM144Q7Z5S9 345 aa9.84□□□□□ -0.83
TNFRSF1A-202ENST00000366159 ZNF709Q8N972 641 aa9.84□□□□□ -0.83
TNFRSF1A-202ENST00000366159 NEU1Q99519 415 aa9.84□□□□□ -0.83
TNFRSF1A-202ENST00000366159 C7orf50Q9BRJ6 194 aaKnown RBP9.84□□□□□ -0.83
TNFRSF1A-202ENST00000366159 XCL2Q9UBD3 114 aa9.84□□□□□ -0.83
TNFRSF1A-202ENST00000366159 PAIP2BQ9ULR5 123 aaKnown RBP9.84□□□□□ -0.83
TNFRSF1A-202ENST00000366159 STRAPQ9Y3F4 350 aaKnown RBP9.84□□□□□ -0.83
TNFRSF1A-202ENST00000366159 HECTD4Q9Y4D8 3996 aa9.84□□□□□ -0.83
TNFRSF1A-202ENST00000366159 ZNF98A6NK75 572 aa9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 ZNF705FA8MVS1 300 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 H3BP45 60 aa9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 ISLRO14498 428 aa9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 ZNF705DP0CH99 300 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 ZNF705BP0CI00 300 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 IL7P13232 177 aa9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 GATA2P23769 480 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 HLA-DMBP28068 263 aa9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 TRIQKQ629K1 86 aa9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 Q6ZTC4 211 aa9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 ACOT7LQ6ZUV0 252 aa9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 OR8I2Q8N0Y5 310 aa9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 SMIM8Q96KF7 97 aa9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 SLC25A32Q9H2D1 315 aa9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 CELA1Q9UNI1 258 aa9.83□□□□□ -0.84
TNFRSF1A-202ENST00000366159 A8MTW9 85 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 PLA2G10O15496 165 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 DEDDO75618 318 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 ANXA7P20073 488 aaKnown RBP9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 ID1P41134 155 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 PRR20EP86478 221 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 PRR20CP86479 221 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 PRR20DP86480 221 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 PRR20BP86481 221 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 PRR20AP86496 221 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 C12orf74Q32Q52 190 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 SPATA31B1PQ5VZV4 182 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 TMEM14EPQ6UXP3 125 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 COQ8AQ8NI60 647 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 C20orf173Q96LM9 149 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 LINC00052Q96N35 136 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 A0A0J9YX75 114 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 LINC00854A0A1B0GVQ3 168 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 IFNA21P01568 189 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 INPP1P49441 399 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 MEOX2P50222 304 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 PLP1P60201 277 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 SAMD13Q5VXD3 122 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 BPIFCQ8NFQ6 507 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 MITD1Q8WV92 249 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 PSENENQ9NZ42 101 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 DNAH2Q9P225 4427 aa9.82□□□□□ -0.84
TNFRSF1A-202ENST00000366159 TRAV10A0A0B4J240 114 aa9.81□□□□□ -0.84
TNFRSF1A-202ENST00000366159 SMIM9A6NGZ8 99 aa9.81□□□□□ -0.84
TNFRSF1A-202ENST00000366159 CENPXA8MT69 81 aa9.81□□□□□ -0.84
TNFRSF1A-202ENST00000366159 IGLL5B9A064 214 aa9.81□□□□□ -0.84
TNFRSF1A-202ENST00000366159 FNDC10F2Z333 226 aa9.81□□□□□ -0.84
TNFRSF1A-202ENST00000366159 F6UB75 175 aa9.81□□□□□ -0.84
TNFRSF1A-202ENST00000366159 CCNKO75909 580 aa9.81□□□□□ -0.84
TNFRSF1A-202ENST00000366159 ORM2P19652 201 aa9.81□□□□□ -0.84
TNFRSF1A-202ENST00000366159 CNPY1Q3B7I2 92 aa9.81□□□□□ -0.84
TNFRSF1A-202ENST00000366159 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.81□□□□□ -0.84
TNFRSF1A-202ENST00000366159 CYP2G1PQ6ZSU1 146 aa9.81□□□□□ -0.84
TNFRSF1A-202ENST00000366159 OR1B1Q8NGR6 318 aa9.81□□□□□ -0.84
TNFRSF1A-202ENST00000366159 PPP1R14BQ96C90 147 aa9.81□□□□□ -0.84
TNFRSF1A-202ENST00000366159 TRAV8-2A0A0B4J237 113 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 H3BRN7 92 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 K7EPK0 472 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 SSSCA1O60232 199 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 IGKV3-20P01619 116 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 GALR1P47211 349 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 TAS2R30P59541 319 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 DLK1P80370 383 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 AKR1C1Q04828 323 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 C4orf46Q504U0 113 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 FAM78BQ5VT40 261 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 AMTNQ6UX39 209 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 C1orf158Q8N1D5 194 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms