RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 LHFPL4Q7Z7J7 247 aa17.63■□□□□ 0.41
NKX2-1-201ENST00000354822 ABCA4P78363 2273 aa17.63■□□□□ 0.41
NKX2-1-201ENST00000354822 C5orf64Q2M2E5 130 aa17.63■□□□□ 0.41
NKX2-1-201ENST00000354822 LEMD1Q68G75 181 aa17.63■□□□□ 0.41
NKX2-1-201ENST00000354822 ATP5L2Q7Z4Y8 100 aa17.63■□□□□ 0.41
NKX2-1-201ENST00000354822 BMPR1BO00238 502 aa17.62■□□□□ 0.41
NKX2-1-201ENST00000354822 HES1Q14469 280 aa17.62■□□□□ 0.41
NKX2-1-201ENST00000354822 CT83Q5H943 113 aa17.62■□□□□ 0.41
NKX2-1-201ENST00000354822 S100A7AQ86SG5 101 aa17.62■□□□□ 0.41
NKX2-1-201ENST00000354822 ZNF492Q9P255 531 aa17.62■□□□□ 0.41
NKX2-1-201ENST00000354822 TRAV30A0A087WSZ9 112 aa17.62■□□□□ 0.41
NKX2-1-201ENST00000354822 ZNF253O75346 499 aa17.62■□□□□ 0.41
NKX2-1-201ENST00000354822 KLRD1Q13241 179 aa17.62■□□□□ 0.41
NKX2-1-201ENST00000354822 SIGLECL1Q8N7X8 197 aa17.62■□□□□ 0.41
NKX2-1-201ENST00000354822 RPH3ALQ9UNE2 315 aa17.62■□□□□ 0.41
NKX2-1-201ENST00000354822 TPRP12270 2363 aaKnown RBP17.61■□□□□ 0.41
NKX2-1-201ENST00000354822 KIAA1644Q3SXP7 199 aa17.61■□□□□ 0.41
NKX2-1-201ENST00000354822 MINOS1Q5TGZ0 78 aa17.61■□□□□ 0.41
NKX2-1-201ENST00000354822 ZNF562Q6V9R5 426 aa17.61■□□□□ 0.41
NKX2-1-201ENST00000354822 Q6ZWC4 215 aa17.61■□□□□ 0.41
NKX2-1-201ENST00000354822 HSPB9Q9BQS6 159 aa17.61■□□□□ 0.41
NKX2-1-201ENST00000354822 ZNF586Q9NXT0 402 aa17.61■□□□□ 0.41
NKX2-1-201ENST00000354822 MINOS1-NBL1R4GNA1 71 aa17.61■□□□□ 0.41
NKX2-1-201ENST00000354822 GPX1P07203 203 aa17.6■□□□□ 0.41
NKX2-1-201ENST00000354822 SRIP30626 198 aa17.6■□□□□ 0.41
NKX2-1-201ENST00000354822 C1orf194Q5T5A4 169 aa17.6■□□□□ 0.41
NKX2-1-201ENST00000354822 BPIFA4PQ86YQ2 179 aa17.6■□□□□ 0.41
NKX2-1-201ENST00000354822 SHANK2-AS3Q9BTD1 123 aa17.6■□□□□ 0.41
NKX2-1-201ENST00000354822 NDUFAF3Q9BU61 184 aa17.6■□□□□ 0.41
NKX2-1-201ENST00000354822 PRSS22Q9GZN4 317 aa17.6■□□□□ 0.41
NKX2-1-201ENST00000354822 NPIPB5A8MRT5 1133 aa17.6■□□□□ 0.41
NKX2-1-201ENST00000354822 HIGD1CA8MV81 97 aa17.6■□□□□ 0.41
NKX2-1-201ENST00000354822 A8MWL6 223 aa17.6■□□□□ 0.41
NKX2-1-201ENST00000354822 F2Z2F3 143 aa17.6■□□□□ 0.41
NKX2-1-201ENST00000354822 NEU1Q99519 415 aa17.6■□□□□ 0.41
NKX2-1-201ENST00000354822 ZNF705FA8MVS1 300 aaPredicted RBP17.59■□□□□ 0.41
NKX2-1-201ENST00000354822 ZNF705DP0CH99 300 aaPredicted RBP17.59■□□□□ 0.41
NKX2-1-201ENST00000354822 ZNF705BP0CI00 300 aaPredicted RBP17.59■□□□□ 0.41
NKX2-1-201ENST00000354822 LBHQ53QV2 105 aaPredicted RBP17.59■□□□□ 0.41
NKX2-1-201ENST00000354822 RPP21Q9H633 154 aaKnown RBP17.59■□□□□ 0.41
NKX2-1-201ENST00000354822 VMO1Q7Z5L0 202 aa17.59■□□□□ 0.41
NKX2-1-201ENST00000354822 LYPD1Q8N2G4 141 aa17.59■□□□□ 0.41
NKX2-1-201ENST00000354822 DAZAP1Q96EP5 407 aaKnown RBP17.59■□□□□ 0.41
NKX2-1-201ENST00000354822 KCNS1Q96KK3 526 aa17.59■□□□□ 0.41
NKX2-1-201ENST00000354822 SGK494Q96LW2 274 aa17.59■□□□□ 0.41
NKX2-1-201ENST00000354822 ZNF48Q96MX3 618 aaPredicted RBP17.59■□□□□ 0.41
NKX2-1-201ENST00000354822 TRBV6-1A0A0K0K1D8 114 aa17.58■□□□□ 0.4
NKX2-1-201ENST00000354822 H3BRN7 92 aa17.58■□□□□ 0.4
NKX2-1-201ENST00000354822 P01737 135 aa17.58■□□□□ 0.4
NKX2-1-201ENST00000354822 ZNF491Q8N8L2 437 aa17.58■□□□□ 0.4
NKX2-1-201ENST00000354822 OR4F17Q8NGA8 305 aa17.58■□□□□ 0.4
NKX2-1-201ENST00000354822 TBX15Q96SF7 602 aa17.58■□□□□ 0.4
NKX2-1-201ENST00000354822 POLR3KQ9Y2Y1 108 aaPredicted RBP17.58■□□□□ 0.4
NKX2-1-201ENST00000354822 SOX21Q9Y651 276 aaPredicted RBP17.58■□□□□ 0.4
NKX2-1-201ENST00000354822 C19orf71A6NCJ1 209 aa17.57■□□□□ 0.4
NKX2-1-201ENST00000354822 H3BTX0 84 aa17.57■□□□□ 0.4
NKX2-1-201ENST00000354822 EBI3Q14213 229 aa17.57■□□□□ 0.4
NKX2-1-201ENST00000354822 RNF125Q96EQ8 232 aa17.57■□□□□ 0.4
NKX2-1-201ENST00000354822 FAM103A1Q9BTL3 118 aaKnown RBP17.57■□□□□ 0.4
NKX2-1-201ENST00000354822 GFRA4Q9GZZ7 299 aa17.57■□□□□ 0.4
NKX2-1-201ENST00000354822 ATRXP46100 2492 aa17.57■□□□□ 0.4
NKX2-1-201ENST00000354822 CD24P25063 80 aa17.57■□□□□ 0.4
NKX2-1-201ENST00000354822 MFAP4P55083 255 aa17.57■□□□□ 0.4
NKX2-1-201ENST00000354822 SLAQ13239 276 aa17.57■□□□□ 0.4
NKX2-1-201ENST00000354822 TTC9CQ8N5M4 171 aa17.57■□□□□ 0.4
NKX2-1-201ENST00000354822 ARPC1AQ92747 370 aa17.57■□□□□ 0.4
NKX2-1-201ENST00000354822 ZMAT5Q9UDW3 170 aaKnown RBP17.57■□□□□ 0.4
NKX2-1-201ENST00000354822 IGLV11-55A0A075B6I3 123 aa17.56■□□□□ 0.4
NKX2-1-201ENST00000354822 WI2-2373I1.2A0A1W2PRP0 233 aa17.56■□□□□ 0.4
NKX2-1-201ENST00000354822 A0A1W2PS18 150 aa17.56■□□□□ 0.4
NKX2-1-201ENST00000354822 ASPHD1Q5U4P2 390 aa17.56■□□□□ 0.4
NKX2-1-201ENST00000354822 THYN1Q9P016 225 aa17.56■□□□□ 0.4
NKX2-1-201ENST00000354822 TRBV19A0A075B6N1 114 aa17.56■□□□□ 0.4
NKX2-1-201ENST00000354822 FAM231BA6NCW3 169 aa17.56■□□□□ 0.4
NKX2-1-201ENST00000354822 GNG7O60262 68 aa17.56■□□□□ 0.4
NKX2-1-201ENST00000354822 Q8N6K4 173 aa17.56■□□□□ 0.4
NKX2-1-201ENST00000354822 KIR2DL5BA0A0G2JN68 375 aa17.55■□□□□ 0.4
NKX2-1-201ENST00000354822 KIR2DL5BA0A0G2JPC4 375 aa17.55■□□□□ 0.4
NKX2-1-201ENST00000354822 A0A1W2PRD5 423 aa17.55■□□□□ 0.4
NKX2-1-201ENST00000354822 A0A1W2PRF3 423 aa17.55■□□□□ 0.4
NKX2-1-201ENST00000354822 A0A1W2PRM7 423 aa17.55■□□□□ 0.4
NKX2-1-201ENST00000354822 OR2J3O76001 311 aa17.55■□□□□ 0.4
NKX2-1-201ENST00000354822 HOXB4P17483 251 aaPredicted RBP17.55■□□□□ 0.4
NKX2-1-201ENST00000354822 KIR2DL5AQ8N109 375 aa17.55■□□□□ 0.4
NKX2-1-201ENST00000354822 A0A1B0GXF2 115 aa17.55■□□□□ 0.4
NKX2-1-201ENST00000354822 NCBP2LA6PVI3 153 aaKnown RBP17.55■□□□□ 0.4
NKX2-1-201ENST00000354822 IL4P05112 153 aa17.55■□□□□ 0.4
NKX2-1-201ENST00000354822 TOMM20LQ6UXN7 152 aa17.55■□□□□ 0.4
NKX2-1-201ENST00000354822 Q86TA4 180 aa17.55■□□□□ 0.4
NKX2-1-201ENST00000354822 FANCD2OSQ96PS1 177 aa17.55■□□□□ 0.4
NKX2-1-201ENST00000354822 IGLC2P0DOY2 106 aa17.54■□□□□ 0.4
NKX2-1-201ENST00000354822 AMTP48728 403 aa17.54■□□□□ 0.4
NKX2-1-201ENST00000354822 LINC00322Q6ZN03 302 aaPredicted RBP17.54■□□□□ 0.4
NKX2-1-201ENST00000354822 TEX43Q6ZNM6 134 aa17.54■□□□□ 0.4
NKX2-1-201ENST00000354822 EXOC3-AS1Q8N2X6 119 aa17.54■□□□□ 0.4
NKX2-1-201ENST00000354822 TBL2Q9Y4P3 447 aaKnown RBP17.54■□□□□ 0.4
NKX2-1-201ENST00000354822 ARHGAP32A7KAX9 2087 aa17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 A6NNC1 897 aa17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 K7EQM0 130 aa17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 ZNF324O75467 553 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 221.2 ms