RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 C17orf112F2Z3M2 114 aa8.99□□□□□ -0.97
SPTLC1-202ENST00000337841 OR5G3P0C626 314 aa8.99□□□□□ -0.97
SPTLC1-202ENST00000337841 LINC00869P0C866 280 aa8.99□□□□□ -0.97
SPTLC1-202ENST00000337841 GP9P14770 177 aa8.99□□□□□ -0.97
SPTLC1-202ENST00000337841 RPL29P47914 159 aaKnown RBP8.99□□□□□ -0.97
SPTLC1-202ENST00000337841 PLP1P60201 277 aa8.99□□□□□ -0.97
SPTLC1-202ENST00000337841 RPL11P62913 178 aaKnown RBP8.99□□□□□ -0.97
SPTLC1-202ENST00000337841 PAFAH1B2P68402 229 aa8.99□□□□□ -0.97
SPTLC1-202ENST00000337841 TCF24Q7RTU0 167 aa8.99□□□□□ -0.97
SPTLC1-202ENST00000337841 ST8SIA2Q92186 375 aa8.99□□□□□ -0.97
SPTLC1-202ENST00000337841 RNF2Q99496 336 aa8.99□□□□□ -0.97
SPTLC1-202ENST00000337841 WDR61Q9GZS3 305 aaKnown RBP8.99□□□□□ -0.97
SPTLC1-202ENST00000337841 MFFQ9GZY8 342 aa8.99□□□□□ -0.97
SPTLC1-202ENST00000337841 ARL6Q9H0F7 186 aa8.99□□□□□ -0.97
SPTLC1-202ENST00000337841 KCNIP2Q9NS61 270 aa8.99□□□□□ -0.97
SPTLC1-202ENST00000337841 TRRAPQ9Y4A5 3859 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 ELOA3CA0A087WX78 387 aaPredicted RBP8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 IZUMO1RA6ND01 250 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 HELTA6NFD8 242 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 ZNF785A8K8V0 405 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 SMLR1H3BR10 107 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 TSPAN4O14817 238 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 ARPC5O15511 151 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 BUB3O43684 328 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 ZNF266Q14584 549 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 OPCMLQ14982 345 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 C1orf194Q5T5A4 169 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 C16orf54Q6UWD8 224 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 AKAP14Q86UN6 197 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 TMEM61Q8N0U2 210 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 OR1L4Q8NGR5 311 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 ST6GAL2Q96JF0 529 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 GGTLC1Q9BX51 225 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 DNAJC4Q9NNZ3 241 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 DOK5Q9P104 306 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 FBXL17Q9UF56 701 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 HIGD1AQ9Y241 93 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 SELENOKQ9Y6D0 94 aa8.98□□□□□ -0.97
SPTLC1-202ENST00000337841 BORCS7-ASMTA0A0B4J1R7 106 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 HMSDA8MTL9 139 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 G3V3Q6 166 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 DNASE2O00115 360 aaPredicted RBP8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 TAAR5O14804 337 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 COX7A2P2O60397 106 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 CMC4P56277 68 aaPredicted RBP8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 B2MP61769 119 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 MIC13Q5XKP0 118 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 FAM90A2PQ658T7 463 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 GTSCR1Q86UQ5 136 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 TCTE3Q8IZS6 198 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 OR8I2Q8N0Y5 310 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 STPG3Q8N7X2 389 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 SPAG8Q99932 426 aaPredicted RBP8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 NPCDR1Q9BY65 106 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 PARD6GQ9BYG4 376 aaPredicted RBP8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 WFDC1Q9HC57 220 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 SLC39A9Q9NUM3 307 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 PXMP4Q9Y6I8 212 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 PKD1L1Q8TDX9 2849 aa8.97□□□□□ -0.97
SPTLC1-202ENST00000337841 A0A0D9SG52 128 aa8.96□□□□□ -0.98
SPTLC1-202ENST00000337841 RNF222A6NCQ9 220 aa8.96□□□□□ -0.98
SPTLC1-202ENST00000337841 OR4C46A6NHA9 309 aa8.96□□□□□ -0.98
SPTLC1-202ENST00000337841 ZNF98A6NK75 572 aa8.96□□□□□ -0.98
SPTLC1-202ENST00000337841 DEFA6Q01524 100 aa8.96□□□□□ -0.98
SPTLC1-202ENST00000337841 C10orf113Q5VZT2 155 aa8.96□□□□□ -0.98
SPTLC1-202ENST00000337841 GPR82Q96P67 336 aa8.96□□□□□ -0.98
SPTLC1-202ENST00000337841 PRR25Q96S07 402 aa8.96□□□□□ -0.98
SPTLC1-202ENST00000337841 PFDN5Q99471 154 aa8.96□□□□□ -0.98
SPTLC1-202ENST00000337841 SLC25A39Q9BZJ4 359 aaPredicted RBP8.96□□□□□ -0.98
SPTLC1-202ENST00000337841 ARV1Q9H2C2 271 aa8.96□□□□□ -0.98
SPTLC1-202ENST00000337841 IGKV3-7A0A075B6H7 116 aa8.95□□□□□ -0.98
SPTLC1-202ENST00000337841 A0A1B0GVG6 124 aa8.95□□□□□ -0.98
SPTLC1-202ENST00000337841 PRB2P02812 416 aaPredicted RBP8.95□□□□□ -0.98
SPTLC1-202ENST00000337841 DEFB121Q5J5C9 76 aa8.95□□□□□ -0.98
SPTLC1-202ENST00000337841 PATE2Q6UY27 113 aa8.95□□□□□ -0.98
SPTLC1-202ENST00000337841 SIGLEC15Q6ZMC9 328 aa8.95□□□□□ -0.98
SPTLC1-202ENST00000337841 WFDC3Q8IUB2 231 aa8.95□□□□□ -0.98
SPTLC1-202ENST00000337841 GBGT1Q8N5D6 347 aa8.95□□□□□ -0.98
SPTLC1-202ENST00000337841 GATAD1Q8WUU5 269 aa8.95□□□□□ -0.98
SPTLC1-202ENST00000337841 GLMPQ8WWB7 406 aa8.95□□□□□ -0.98
SPTLC1-202ENST00000337841 SHANK2-AS3Q9BTD1 123 aa8.95□□□□□ -0.98
SPTLC1-202ENST00000337841 SLC25A22Q9H936 323 aa8.95□□□□□ -0.98
SPTLC1-202ENST00000337841 AURKAIP1Q9NWT8 199 aaPredicted RBP8.95□□□□□ -0.98
SPTLC1-202ENST00000337841 TRAV2A0A0B4J234 112 aa8.94□□□□□ -0.98
SPTLC1-202ENST00000337841 JTBO76095 146 aa8.94□□□□□ -0.98
SPTLC1-202ENST00000337841 GALR1P47211 349 aa8.94□□□□□ -0.98
SPTLC1-202ENST00000337841 TFPI2P48307 235 aa8.94□□□□□ -0.98
SPTLC1-202ENST00000337841 ZNF345Q14585 488 aa8.94□□□□□ -0.98
SPTLC1-202ENST00000337841 LINC00305Q7Z4B0 112 aa8.94□□□□□ -0.98
SPTLC1-202ENST00000337841 KCNRGQ8N5I3 272 aa8.94□□□□□ -0.98
SPTLC1-202ENST00000337841 STXBP6Q8NFX7 210 aa8.94□□□□□ -0.98
SPTLC1-202ENST00000337841 OR11H4Q8NGC9 324 aa8.94□□□□□ -0.98
SPTLC1-202ENST00000337841 TMEM37Q8WXS4 190 aa8.94□□□□□ -0.98
SPTLC1-202ENST00000337841 MS4A6AQ9H2W1 248 aa8.94□□□□□ -0.98
SPTLC1-202ENST00000337841 TIMM9Q9Y5J7 89 aa8.94□□□□□ -0.98
SPTLC1-202ENST00000337841 H3BRN7 92 aa8.93□□□□□ -0.98
SPTLC1-202ENST00000337841 C1QBP02746 253 aa8.93□□□□□ -0.98
SPTLC1-202ENST00000337841 RPL7P18124 248 aaKnown RBP8.93□□□□□ -0.98
SPTLC1-202ENST00000337841 CD81P60033 236 aa8.93□□□□□ -0.98
SPTLC1-202ENST00000337841 FFAR4Q5NUL3 377 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms