RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 FER1L6-AS1Q8NA97 138 aa11.11□□□□□ -0.63
SYNE3-201ENST00000334258 EPDR1Q9UM22 224 aa11.11□□□□□ -0.63
SYNE3-201ENST00000334258 K7EM74 188 aa11.11□□□□□ -0.63
SYNE3-201ENST00000334258 IGKV3-15P01624 115 aa11.11□□□□□ -0.63
SYNE3-201ENST00000334258 LIPFP07098 398 aa11.11□□□□□ -0.63
SYNE3-201ENST00000334258 UQCRFS1P47985 274 aa11.11□□□□□ -0.63
SYNE3-201ENST00000334258 DUX4L9Q6RFH8 374 aaPredicted RBP11.11□□□□□ -0.63
SYNE3-201ENST00000334258 CHCHD1Q96BP2 118 aaKnown RBP11.11□□□□□ -0.63
SYNE3-201ENST00000334258 GPR82Q96P67 336 aa11.11□□□□□ -0.63
SYNE3-201ENST00000334258 ZNF835Q9Y2P0 537 aa11.11□□□□□ -0.63
SYNE3-201ENST00000334258 PLCE1Q9P212 2302 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 PPIAL4DF5H284 164 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 DLL1O00548 723 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 KLK10O43240 276 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 GPR183P32249 361 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 SPRNQ5BIV9 151 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 FAM120AOSQ5T036 256 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 ASCL5Q7RTU5 278 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.1□□□□□ -0.63
SYNE3-201ENST00000334258 OR1B1Q8NGR6 318 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 OR1L8Q8NGR8 309 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 HARBI1Q96MB7 349 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 ATP6V0BQ99437 205 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 TRAV8-6A0A0B4J262 113 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 MOSP00540 346 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 HLA-DRB1P01911 266 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 REG1BP48304 166 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 TCTAP57738 103 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 CACNG8Q8WXS5 425 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 PEF1Q9UBV8 284 aaKnown RBP11.1□□□□□ -0.63
SYNE3-201ENST00000334258 PTPRBP23467 1997 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 A0A1B0GXF2 115 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 GAGE10A6NGK3 116 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 CT45A6P0DMU7 189 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 CT45A5P0DMU8 189 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 CT45A7P0DMV0 189 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 HTR1DP28221 377 aa11.1□□□□□ -0.63
SYNE3-201ENST00000334258 COL25A1Q9BXS0 654 aaPredicted RBP11.1□□□□□ -0.63
SYNE3-201ENST00000334258 NAV3Q8IVL0 2385 aa11.09□□□□□ -0.63
SYNE3-201ENST00000334258 C7orf71A4D174 169 aa11.09□□□□□ -0.63
SYNE3-201ENST00000334258 G3V4G9 280 aa11.09□□□□□ -0.63
SYNE3-201ENST00000334258 CD5LO43866 347 aa11.09□□□□□ -0.63
SYNE3-201ENST00000334258 BPIFA4PQ86YQ2 179 aa11.09□□□□□ -0.63
SYNE3-201ENST00000334258 THYN1Q9P016 225 aa11.09□□□□□ -0.63
SYNE3-201ENST00000334258 HSPB8Q9UJY1 196 aa11.09□□□□□ -0.63
SYNE3-201ENST00000334258 ABCA4P78363 2273 aa11.09□□□□□ -0.63
SYNE3-201ENST00000334258 CRXO43186 299 aaPredicted RBP11.09□□□□□ -0.63
SYNE3-201ENST00000334258 OR5AL1P0C617 328 aa11.09□□□□□ -0.63
SYNE3-201ENST00000334258 HIST1H1AQ02539 215 aaPredicted RBP11.09□□□□□ -0.63
SYNE3-201ENST00000334258 PATE2Q6UY27 113 aa11.09□□□□□ -0.63
SYNE3-201ENST00000334258 LINC00322Q6ZN03 302 aaPredicted RBP11.09□□□□□ -0.63
SYNE3-201ENST00000334258 SSUH2Q9Y2M2 353 aa11.09□□□□□ -0.63
SYNE3-201ENST00000334258 POU2AF1Q16633 256 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 C10orf55Q5SWW7 151 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 C5orf17Q8NAS9 161 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 GTSF1Q8WW33 167 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 ITLN1Q8WWA0 313 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 FXYD5Q96DB9 178 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 ZNF714Q96N38 554 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 TMUB1Q9BVT8 246 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 PPIAL4EA0A075B759 164 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 PPIAL4CA0A0B4J2A2 164 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 PPIAL4FP0DN26 164 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 COL8A1P27658 744 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 ATP5IP56385 69 aaPredicted RBP11.08□□□□□ -0.64
SYNE3-201ENST00000334258 CR1LQ2VPA4 569 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 MDS2Q8NDY4 140 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 FNDC4Q9H6D8 234 aaPredicted RBP11.08□□□□□ -0.64
SYNE3-201ENST00000334258 SCRT2Q9NQ03 307 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 PLXNB1O43157 2135 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.08□□□□□ -0.64
SYNE3-201ENST00000334258 FOXC1Q12948 553 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 PET117Q6UWS5 81 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 RBPMS2Q6ZRY4 209 aaKnown RBP11.08□□□□□ -0.64
SYNE3-201ENST00000334258 CCL13Q99616 98 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 TPPP3Q9BW30 176 aa11.08□□□□□ -0.64
SYNE3-201ENST00000334258 PRR33A8MZF0 331 aa11.07□□□□□ -0.64
SYNE3-201ENST00000334258 NAA38Q9BRA0 125 aaKnown RBP11.07□□□□□ -0.64
SYNE3-201ENST00000334258 PSMB11A5LHX3 300 aa11.07□□□□□ -0.64
SYNE3-201ENST00000334258 RPS20P60866 119 aaKnown RBP11.07□□□□□ -0.64
SYNE3-201ENST00000334258 CKS1BP61024 79 aa11.07□□□□□ -0.64
SYNE3-201ENST00000334258 FLYWCH2Q96CP2 140 aaKnown RBP11.07□□□□□ -0.64
SYNE3-201ENST00000334258 IGHV1-18A0A0C4DH31 117 aa11.06□□□□□ -0.64
SYNE3-201ENST00000334258 TCRBV4S1A1TA0A5B7 111 aa11.06□□□□□ -0.64
SYNE3-201ENST00000334258 E7EUB6 86 aa11.06□□□□□ -0.64
SYNE3-201ENST00000334258 SMPXQ9UHP9 88 aa11.06□□□□□ -0.64
SYNE3-201ENST00000334258 IGHV3-21A0A0B4J1V1 117 aa11.06□□□□□ -0.64
SYNE3-201ENST00000334258 CGB3P0DN86 165 aa11.06□□□□□ -0.64
SYNE3-201ENST00000334258 CGB7P0DN87 165 aa11.06□□□□□ -0.64
SYNE3-201ENST00000334258 SUB1P53999 127 aaKnown RBP eCLIP11.06□□□□□ -0.64
SYNE3-201ENST00000334258 FAM71F2Q6NXP2 309 aa11.06□□□□□ -0.64
SYNE3-201ENST00000334258 FAM216BQ8N7L0 139 aa11.06□□□□□ -0.64
SYNE3-201ENST00000334258 TMEM178AQ8NBL3 297 aa11.06□□□□□ -0.64
SYNE3-201ENST00000334258 H1FXQ92522 213 aaKnown RBP11.06□□□□□ -0.64
SYNE3-201ENST00000334258 MRPL20Q9BYC9 149 aaKnown RBP11.06□□□□□ -0.64
SYNE3-201ENST00000334258 ZNF71Q9NQZ8 489 aaPredicted RBP11.06□□□□□ -0.64
SYNE3-201ENST00000334258 DYSFO75923 2080 aa11.06□□□□□ -0.64
SYNE3-201ENST00000334258 VSTM5A8MXK1 200 aa11.06□□□□□ -0.64
SYNE3-201ENST00000334258 MBNL2Q5VZF2 373 aaKnown RBP11.06□□□□□ -0.64
SYNE3-201ENST00000334258 PRSS3P2Q8NHM4 247 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 659.1 ms