RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 TCRAP04437 139 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 COL8A1P27658 744 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 CACNG7P62955 275 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 MZT1Q08AG7 82 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 ETDBQ3ZM63 59 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 OR8A1Q8NGG7 326 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 RLN3Q8WXF3 142 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 MCRIP2Q9BUT9 160 aaKnown RBP6.74□□□□□ -1.33
SKA2-201ENST00000330137 CDIP1Q9H305 208 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 HCFC1P51610 2035 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 TET2Q6N021 2002 aaPredicted RBP6.74□□□□□ -1.33
SKA2-201ENST00000330137 MED12LQ86YW9 2145 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 A0A096LPE4 126 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 A0A1W2PPZ6 126 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 APOMO95445 188 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 MT-CO3P00414 261 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 CELA3AP09093 270 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 COX6A1P12074 109 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 ZNF138P52744 262 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 LINC00322Q6ZN03 302 aaPredicted RBP6.74□□□□□ -1.33
SKA2-201ENST00000330137 YRDCQ86U90 279 aaKnown RBP6.74□□□□□ -1.33
SKA2-201ENST00000330137 CXXC4Q9H2H0 198 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 GNG12Q9UBI6 72 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 USF3Q68DE3 2245 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 PGPA6NDG6 321 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 ZNF503-AS2A6NEH8 195 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 MPV17P39210 176 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 NBL1P41271 181 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 NMUP48645 174 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 ZNF137PP52743 207 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 LOXL3P58215 753 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 ERHP84090 104 aaKnown RBP6.74□□□□□ -1.33
SKA2-201ENST00000330137 RRN3P1Q2M238 152 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 PCP2Q8IVA1 136 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 ORMDL3Q8N138 153 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 OTORQ9NRC9 128 aa6.74□□□□□ -1.33
SKA2-201ENST00000330137 TRAV5A0A0B4J249 113 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 CCL11P51671 97 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 LINC00205P59089 165 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 LYRM7Q5U5X0 104 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 ZNF562Q6V9R5 426 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 Q6ZUT4 128 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 VKORC1L1Q8N0U8 176 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 ZCCHC24Q8N2G6 241 aaKnown RBP6.73□□□□□ -1.33
SKA2-201ENST00000330137 DEFB119Q8N690 84 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 ARPC1AQ92747 370 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 TRBV25-1A0A075B6N4 114 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 IGHV1OR15-9A0A0B4J2B8 117 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 NPIPB5A8MRT5 1133 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 M0QXV9 152 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 ATP5LO75964 103 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 CSN3P07498 182 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 PYYP10082 97 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 C12orf74Q32Q52 190 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 KLF17Q5JT82 389 aaPredicted RBP6.73□□□□□ -1.33
SKA2-201ENST00000330137 PATE2Q6UY27 113 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 ASCL5Q7RTU5 278 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 Q86TA4 180 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 C11orf53Q8IXP5 236 aa6.73□□□□□ -1.33
SKA2-201ENST00000330137 KLF13Q9Y2Y9 288 aaPredicted RBP6.73□□□□□ -1.33
SKA2-201ENST00000330137 ZNF407Q9C0G0 2248 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 ABCA7Q8IZY2 2146 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 IGHV3-43A0A0B4J1X8 118 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 TNFRSF13BO14836 293 aaPredicted RBP6.72□□□□□ -1.33
SKA2-201ENST00000330137 IGHV3-43DP0DP04 118 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 IFI27P40305 119 aaPredicted RBP6.72□□□□□ -1.33
SKA2-201ENST00000330137 MORN5Q5VZ52 161 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 LINC00696Q6ZRV3 163 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 NHP2Q9NX24 153 aaKnown RBP6.72□□□□□ -1.33
SKA2-201ENST00000330137 TMEM14CQ9P0S9 112 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 HHLA3Q9XRX5 114 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 ZFHX2Q9C0A1 2572 aaPredicted RBP6.72□□□□□ -1.33
SKA2-201ENST00000330137 CACNA1HO95180 2353 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 NDUFS7O75251 213 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 ACP1P24666 158 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 CFAP126Q5VTH2 177 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 FAM104BQ5XKR9 115 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 FAM53AQ6NSI3 398 aaPredicted RBP6.72□□□□□ -1.33
SKA2-201ENST00000330137 LINC00305Q7Z4B0 112 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 SH2D6Q7Z4S9 175 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 TMEM75Q8N9X5 138 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 TMEM158Q8WZ71 300 aa6.72□□□□□ -1.33
SKA2-201ENST00000330137 DEFB108AA8MXU0 73 aa6.71□□□□□ -1.33
SKA2-201ENST00000330137 CD24P25063 80 aa6.71□□□□□ -1.33
SKA2-201ENST00000330137 IL11RAQ14626 422 aa6.71□□□□□ -1.33
SKA2-201ENST00000330137 RPL39P5Q59GN2 51 aa6.71□□□□□ -1.33
SKA2-201ENST00000330137 SYT8Q8NBV8 401 aa6.71□□□□□ -1.33
SKA2-201ENST00000330137 PPDPFLQ8WWR9 84 aa6.71□□□□□ -1.33
SKA2-201ENST00000330137 PRELID3AQ96N28 172 aa6.71□□□□□ -1.33
SKA2-201ENST00000330137 ANAPC13Q9BS18 74 aa6.71□□□□□ -1.33
SKA2-201ENST00000330137 NDUFA4L2Q9NRX3 87 aa6.71□□□□□ -1.33
SKA2-201ENST00000330137 FRYLO94915 3013 aa6.71□□□□□ -1.33
SKA2-201ENST00000330137 SDK1Q7Z5N4 2213 aa6.71□□□□□ -1.34
SKA2-201ENST00000330137 ZNF785A8K8V0 405 aa6.71□□□□□ -1.34
SKA2-201ENST00000330137 IGKCP01834 107 aa6.71□□□□□ -1.34
SKA2-201ENST00000330137 GRPP07492 148 aa6.71□□□□□ -1.34
SKA2-201ENST00000330137 CGB3P0DN86 165 aa6.71□□□□□ -1.34
SKA2-201ENST00000330137 CGB7P0DN87 165 aa6.71□□□□□ -1.34
SKA2-201ENST00000330137 CFHR2P36980 270 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms