RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 OR2D3Q8NGH3 330 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 C8orf46Q8TAG6 207 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 VN1R17PQ8TDU5 208 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 GNB1LQ9BYB4 327 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 TRAV9-1A0A075B6T8 112 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 FSTL3O95633 263 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 AMY1AP04745 511 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 IL4P05112 153 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 WDR73Q6P4I2 378 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 GOLT1AQ6ZVE7 132 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 FAM19A2Q8N3H0 131 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 SIGLECL1Q8N7X8 197 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 RCHY1Q96PM5 261 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 NEU1Q99519 415 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 SLC25A39Q9BZJ4 359 aaPredicted RBP9.17□□□□□ -0.94
PTPN2-201ENST00000309660 APCSP02743 223 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 LINC00310P59036 64 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 PRNTQ86SH4 94 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 DAZAP1Q96EP5 407 aaKnown RBP9.17□□□□□ -0.94
PTPN2-201ENST00000309660 C17orf77Q96MU5 243 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 PIEZO1Q92508 2521 aa9.17□□□□□ -0.94
PTPN2-201ENST00000309660 GNG7O60262 68 aa9.16□□□□□ -0.94
PTPN2-201ENST00000309660 SLAQ13239 276 aa9.16□□□□□ -0.94
PTPN2-201ENST00000309660 Q6ZWC4 215 aa9.16□□□□□ -0.94
PTPN2-201ENST00000309660 NUP35Q8NFH5 326 aa9.16□□□□□ -0.94
PTPN2-201ENST00000309660 A0A1W2PPR1 153 aa9.16□□□□□ -0.94
PTPN2-201ENST00000309660 FCGR2BP31994 310 aaPredicted RBP9.16□□□□□ -0.94
PTPN2-201ENST00000309660 VMO1Q7Z5L0 202 aa9.16□□□□□ -0.94
PTPN2-201ENST00000309660 PAM16Q9Y3D7 125 aa9.16□□□□□ -0.94
PTPN2-201ENST00000309660 IZUMO1RA6ND01 250 aa9.15□□□□□ -0.94
PTPN2-201ENST00000309660 A6NNC1 897 aa9.15□□□□□ -0.94
PTPN2-201ENST00000309660 I3L2K1 104 aa9.15□□□□□ -0.94
PTPN2-201ENST00000309660 BMPR1BO00238 502 aa9.15□□□□□ -0.94
PTPN2-201ENST00000309660 IGKV1-17P01599 117 aa9.15□□□□□ -0.94
PTPN2-201ENST00000309660 HIST1H1EP10412 219 aaKnown RBP9.15□□□□□ -0.94
PTPN2-201ENST00000309660 GP9P14770 177 aa9.15□□□□□ -0.94
PTPN2-201ENST00000309660 Q56UQ5 140 aa9.15□□□□□ -0.94
PTPN2-201ENST00000309660 Q71RC1 249 aaPredicted RBP9.15□□□□□ -0.94
PTPN2-201ENST00000309660 C5orf17Q8NAS9 161 aa9.15□□□□□ -0.94
PTPN2-201ENST00000309660 GPR82Q96P67 336 aa9.15□□□□□ -0.94
PTPN2-201ENST00000309660 ATG101Q9BSB4 218 aa9.15□□□□□ -0.94
PTPN2-201ENST00000309660 SMIM27A0A1W2PRY6 76 aa9.15□□□□□ -0.94
PTPN2-201ENST00000309660 LY6LH3BQJ8 138 aa9.15□□□□□ -0.94
PTPN2-201ENST00000309660 MT-ND6P03923 174 aa9.15□□□□□ -0.94
PTPN2-201ENST00000309660 DYNAPQ8N1N2 210 aa9.15□□□□□ -0.94
PTPN2-201ENST00000309660 CIARTQ8N365 385 aaPredicted RBP9.15□□□□□ -0.94
PTPN2-201ENST00000309660 TPPP3Q9BW30 176 aa9.15□□□□□ -0.94
PTPN2-201ENST00000309660 P01737 135 aa9.15□□□□□ -0.95
PTPN2-201ENST00000309660 HLA-DQA1P01909 254 aa9.15□□□□□ -0.95
PTPN2-201ENST00000309660 TCRAP04437 139 aa9.15□□□□□ -0.95
PTPN2-201ENST00000309660 BRS3P32247 399 aa9.15□□□□□ -0.95
PTPN2-201ENST00000309660 TMEM183BQ1AE95 376 aa9.15□□□□□ -0.95
PTPN2-201ENST00000309660 TDRG1Q3Y452 100 aa9.15□□□□□ -0.95
PTPN2-201ENST00000309660 LINC00322Q6ZN03 302 aaPredicted RBP9.15□□□□□ -0.95
PTPN2-201ENST00000309660 PGLYRP4Q96LB8 373 aa9.15□□□□□ -0.95
PTPN2-201ENST00000309660 ZNF586Q9NXT0 402 aa9.15□□□□□ -0.95
PTPN2-201ENST00000309660 TRBV9A0A0B4J1U6 114 aa9.14□□□□□ -0.95
PTPN2-201ENST00000309660 K7EIM0 57 aa9.14□□□□□ -0.95
PTPN2-201ENST00000309660 REC114Q7Z4M0 266 aa9.14□□□□□ -0.95
PTPN2-201ENST00000309660 BCL6BQ8N143 479 aaPredicted RBP9.14□□□□□ -0.95
PTPN2-201ENST00000309660 TBL2Q9Y4P3 447 aaKnown RBP9.14□□□□□ -0.95
PTPN2-201ENST00000309660 A0A1B0GV90 55 aa9.14□□□□□ -0.95
PTPN2-201ENST00000309660 A8MWP6 167 aa9.14□□□□□ -0.95
PTPN2-201ENST00000309660 OR2J3O76001 311 aa9.14□□□□□ -0.95
PTPN2-201ENST00000309660 ZFP36P26651 326 aaKnown RBP9.14□□□□□ -0.95
PTPN2-201ENST00000309660 COL8A1P27658 744 aa9.14□□□□□ -0.95
PTPN2-201ENST00000309660 UQCRFS1P47985 274 aa9.14□□□□□ -0.95
PTPN2-201ENST00000309660 LY6G5BQ8NDX9 201 aa9.14□□□□□ -0.95
PTPN2-201ENST00000309660 POLR3KQ9Y2Y1 108 aaPredicted RBP9.14□□□□□ -0.95
PTPN2-201ENST00000309660 PRTN3P24158 256 aa9.14□□□□□ -0.95
PTPN2-201ENST00000309660 FOXA3P55318 350 aaPredicted RBP9.14□□□□□ -0.95
PTPN2-201ENST00000309660 C5orf64Q2M2E5 130 aa9.14□□□□□ -0.95
PTPN2-201ENST00000309660 GRAMD2BQ96HH9 432 aa9.14□□□□□ -0.95
PTPN2-201ENST00000309660 TIMM8BQ9Y5J9 83 aaPredicted RBP9.14□□□□□ -0.95
PTPN2-201ENST00000309660 CACNA1AO00555 2505 aa9.13□□□□□ -0.95
PTPN2-201ENST00000309660 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.13□□□□□ -0.951e-10■■■■■ 48.4
PTPN2-201ENST00000309660 M0R3E3 92 aa9.13□□□□□ -0.95
PTPN2-201ENST00000309660 PAFAH1B2P68402 229 aa9.13□□□□□ -0.95
PTPN2-201ENST00000309660 NDPQ00604 133 aa9.13□□□□□ -0.95
PTPN2-201ENST00000309660 ZNF705AQ6ZN79 300 aaPredicted RBP9.13□□□□□ -0.95
PTPN2-201ENST00000309660 OR4F17Q8NGA8 305 aa9.13□□□□□ -0.95
PTPN2-201ENST00000309660 NEU4Q8WWR8 484 aaPredicted RBP9.13□□□□□ -0.95
PTPN2-201ENST00000309660 PKD1L2Q7Z442 2459 aa9.13□□□□□ -0.95
PTPN2-201ENST00000309660 SH2D7A6NKC9 451 aaPredicted RBP9.13□□□□□ -0.95
PTPN2-201ENST00000309660 OR11H6Q8NGC7 330 aa9.13□□□□□ -0.95
PTPN2-201ENST00000309660 CFHR4Q92496 578 aa9.13□□□□□ -0.95
PTPN2-201ENST00000309660 RNF125Q96EQ8 232 aa9.13□□□□□ -0.95
PTPN2-201ENST00000309660 TMEM11P17152 192 aa9.12□□□□□ -0.95
PTPN2-201ENST00000309660 MYCNOSP40205 109 aa9.12□□□□□ -0.95
PTPN2-201ENST00000309660 DNLZQ5SXM8 178 aa9.12□□□□□ -0.95
PTPN2-201ENST00000309660 BPIFA4PQ86YQ2 179 aa9.12□□□□□ -0.95
PTPN2-201ENST00000309660 ARPC1AQ92747 370 aa9.12□□□□□ -0.95
PTPN2-201ENST00000309660 TMUB1Q9BVT8 246 aa9.12□□□□□ -0.95
PTPN2-201ENST00000309660 RNF114Q9Y508 228 aa9.12□□□□□ -0.95
PTPN2-201ENST00000309660 IGHV3OR16-10A0A075B7F0 116 aa9.12□□□□□ -0.95
PTPN2-201ENST00000309660 OR2T8A6NH00 312 aa9.12□□□□□ -0.95
PTPN2-201ENST00000309660 ECSCRQ19T08 205 aa9.12□□□□□ -0.95
PTPN2-201ENST00000309660 GDF5OSQ5U4N7 250 aa9.12□□□□□ -0.95
PTPN2-201ENST00000309660 RNASEKQ6P5S7 137 aaKnown RBP9.12□□□□□ -0.95
PTPN2-201ENST00000309660 TSKUQ8WUA8 353 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms