RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 PRO1933Q9H354 126 aa8.7□□□□□ -1.02
SYNPO2-201ENST00000307142 DIRC3C9JPN6 131 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 Q6ZR03 302 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 C18orf15Q96N68 181 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 TMEM160Q9NX00 188 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 DOCK11Q5JSL3 2073 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 LINC00473A8K010 186 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 H3BRM9 83 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 ST20Q9HBF5 79 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 ZNF581Q9P0T4 197 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 EPDR1Q9UM22 224 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 TRAV5A0A0B4J249 113 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 APOC4P55056 127 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 RNF144BQ7Z419 303 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 SCGB3A1Q96QR1 104 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 A0A087WX48 190 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 DEFB112Q30KQ8 113 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 DNLZQ5SXM8 178 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 NR2C2APQ86WQ0 139 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 ADARB2-AS1A8MUL3 147 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 IGKV1-16P04430 117 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 DEFB130BP0DP73 79 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 DEFB130AP0DP74 79 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 C11orf68Q9H3H3 251 aaKnown RBP8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 PSG8Q9UQ74 426 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 PAM16Q9Y3D7 125 aa8.69□□□□□ -1.02
SYNPO2-201ENST00000307142 SLC17A3O00476 420 aa8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 DEFB131AP59861 70 aa8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 Q5BKY6 102 aa8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 GTF2H5Q6ZYL4 71 aa8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 SRRM4A7MD48 611 aaKnown RBP8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 TSSC4Q9Y5U2 329 aaPredicted RBP8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 OTX1P32242 354 aaPredicted RBP8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 SRSF4Q08170 494 aaKnown RBP8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 TMEM249Q2WGJ8 235 aa8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 FAM120AOSQ5T036 256 aa8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 A0A1W2PNU3 283 aaPredicted RBP8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 CXorf65A6NEN9 183 aa8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 G3V318 75 aa8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 EXOC3-AS1Q8N2X6 119 aa8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 ARFGEF3Q5TH69 2177 aa8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 NPIPB5A8MRT5 1133 aa8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 BIVMQ86UB2 503 aa8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 MRPS16Q9Y3D3 137 aaKnown RBP8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 TGIF2-C20orf24A0A0A6YYL0 155 aa8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 HOXB4P17483 251 aaPredicted RBP8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 CACNG7P62955 275 aa8.68□□□□□ -1.02
SYNPO2-201ENST00000307142 TMEM238LA0A1B0GVL6 79 aa8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 A6NJY4 79 aa8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 VENTXO95231 258 aa8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 MPZP25189 248 aa8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 SMIM12Q96EX1 92 aa8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 HIST1H4GQ99525 98 aa8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 TRGV9Q99603 122 aa8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 M0R143 59 aa8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 TMEM50AO95807 157 aa8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 CA1P00915 261 aaPredicted RBP8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 HSPB9Q9BQS6 159 aa8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 NAPSAO96009 420 aa8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 IGHV4-59P01825 116 aa8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 ALPK3Q96L96 1907 aa8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 EFNB1P98172 346 aa8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 TMEM136Q6ZRR5 245 aa8.67□□□□□ -1.02
SYNPO2-201ENST00000307142 TOMM40O96008 361 aa8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 ZNF562Q6V9R5 426 aa8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 VPREB3Q9UKI3 123 aa8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 FOXA3P55318 350 aaPredicted RBP8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 TEX36Q5VZQ5 186 aa8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 IGHV4-61A0A0C4DH41 118 aa8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 HIGD1CA8MV81 97 aa8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 IGFL4Q6B9Z1 124 aa8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 SPTAN1Q13813 2472 aaKnown RBP8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 IGLV3-9A0A075B6K5 115 aa8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 TRGC2P03986 189 aa8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 NTF4P34130 210 aa8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 SOX21Q9Y651 276 aaPredicted RBP8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 TRBV9A0A0B4J1U6 114 aa8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 F5H768 121 aa8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 COX6CP09669 75 aa8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 DAD1P61803 113 aa8.66□□□□□ -1.02
SYNPO2-201ENST00000307142 TMEM250H0YL14 139 aa8.65□□□□□ -1.02
SYNPO2-201ENST00000307142 CFHR3Q02985 330 aa8.65□□□□□ -1.02
SYNPO2-201ENST00000307142 RNASE7Q9H1E1 156 aaKnown RBP8.65□□□□□ -1.02
SYNPO2-201ENST00000307142 EVI2AP22794 236 aa8.65□□□□□ -1.02
SYNPO2-201ENST00000307142 LOXP28300 417 aaPredicted RBP8.65□□□□□ -1.02
SYNPO2-201ENST00000307142 TCTEX1D4Q5JR98 221 aa8.65□□□□□ -1.02
SYNPO2-201ENST00000307142 Q6AWC8 147 aa8.65□□□□□ -1.02
SYNPO2-201ENST00000307142 XCL2Q9UBD3 114 aa8.65□□□□□ -1.02
SYNPO2-201ENST00000307142 PTPRSQ13332 1948 aa8.65□□□□□ -1.02
SYNPO2-201ENST00000307142 A6NDN8 102 aa8.65□□□□□ -1.02
SYNPO2-201ENST00000307142 COTL1Q14019 142 aa8.65□□□□□ -1.02
SYNPO2-201ENST00000307142 SRSF8Q9BRL6 282 aaKnown RBP8.65□□□□□ -1.02
SYNPO2-201ENST00000307142 TRBV6-6A0A0A6YYG2 114 aa8.65□□□□□ -1.02
SYNPO2-201ENST00000307142 ZNF843Q8N446 348 aa8.65□□□□□ -1.02
SYNPO2-201ENST00000307142 ZNF98A6NK75 572 aa8.65□□□□□ -1.03
SYNPO2-201ENST00000307142 IFI27P40305 119 aaPredicted RBP8.65□□□□□ -1.03
SYNPO2-201ENST00000307142 VCX2Q9H322 139 aa8.65□□□□□ -1.03
SYNPO2-201ENST00000307142 APOHP02749 345 aaPredicted RBP8.65□□□□□ -1.03
SYNPO2-201ENST00000307142 CBLN1P23435 193 aa8.65□□□□□ -1.03
SYNPO2-201ENST00000307142 C9orf139Q6ZV77 190 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms