RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 CSN3P07498 182 aa20.61■□□□□ 0.89
HDAC3-201ENST00000305264 OR5G3P0C626 314 aa20.61■□□□□ 0.89
HDAC3-201ENST00000305264 TMEM37Q8WXS4 190 aa20.61■□□□□ 0.89
HDAC3-201ENST00000305264 UHRF2Q96PU4 802 aa20.61■□□□□ 0.89
HDAC3-201ENST00000305264 MRPL27Q9P0M9 148 aaKnown RBP20.61■□□□□ 0.89
HDAC3-201ENST00000305264 NOTCH3Q9UM47 2321 aa20.61■□□□□ 0.89
HDAC3-201ENST00000305264 HYPMO75409 117 aa20.61■□□□□ 0.89
HDAC3-201ENST00000305264 CRYBB3P26998 211 aa20.61■□□□□ 0.89
HDAC3-201ENST00000305264 COX7A2P2O60397 106 aa20.6■□□□□ 0.89
HDAC3-201ENST00000305264 TPT1P13693 172 aaKnown RBP20.6■□□□□ 0.89
HDAC3-201ENST00000305264 FOLR2P14207 255 aa20.6■□□□□ 0.89
HDAC3-201ENST00000305264 CD33P20138 364 aa20.6■□□□□ 0.89
HDAC3-201ENST00000305264 NPPCP23582 126 aa20.6■□□□□ 0.89
HDAC3-201ENST00000305264 SLC51BQ86UW2 128 aa20.6■□□□□ 0.89
HDAC3-201ENST00000305264 IGHV3-66A0A0C4DH42 116 aa20.59■□□□□ 0.89
HDAC3-201ENST00000305264 IGHV7-4-1A0A0J9YVY3 117 aa20.59■□□□□ 0.89
HDAC3-201ENST00000305264 CBLN1P23435 193 aa20.59■□□□□ 0.89
HDAC3-201ENST00000305264 PXDC1Q5TGL8 231 aa20.59■□□□□ 0.89
HDAC3-201ENST00000305264 BAP18Q8IXM2 172 aa20.59■□□□□ 0.89
HDAC3-201ENST00000305264 OR2G3Q8NGZ4 309 aa20.59■□□□□ 0.89
HDAC3-201ENST00000305264 PPP1R14BQ96C90 147 aa20.59■□□□□ 0.89
HDAC3-201ENST00000305264 HIGD1AQ9Y241 93 aa20.59■□□□□ 0.89
HDAC3-201ENST00000305264 SELENOKQ9Y6D0 94 aa20.59■□□□□ 0.89
HDAC3-201ENST00000305264 SPP1P10451 314 aa20.59■□□□□ 0.89
HDAC3-201ENST00000305264 C4BPBP20851 252 aa20.59■□□□□ 0.89
HDAC3-201ENST00000305264 WFDC9Q8NEX5 89 aa20.59■□□□□ 0.89
HDAC3-201ENST00000305264 VSIRQ9H7M9 311 aa20.59■□□□□ 0.89
HDAC3-201ENST00000305264 ST8SIA2Q92186 375 aa20.58■□□□□ 0.89
HDAC3-201ENST00000305264 ELOVL1Q9BW60 279 aa20.58■□□□□ 0.89
HDAC3-201ENST00000305264 SMPXQ9UHP9 88 aa20.58■□□□□ 0.89
HDAC3-201ENST00000305264 U3KQE9 123 aa20.58■□□□□ 0.89
HDAC3-201ENST00000305264 C8orf88P0DMB2 117 aa20.57■□□□□ 0.88
HDAC3-201ENST00000305264 EIF5AP63241 154 aaKnown RBP20.57■□□□□ 0.88
HDAC3-201ENST00000305264 SEC14L6B5MCN3 397 aa20.57■□□□□ 0.88
HDAC3-201ENST00000305264 C10orf113Q5VZT2 155 aa20.57■□□□□ 0.88
HDAC3-201ENST00000305264 RHPN1-AS1Q9BWJ2 59 aa20.57■□□□□ 0.88
HDAC3-201ENST00000305264 SLC25A39Q9BZJ4 359 aaPredicted RBP20.57■□□□□ 0.88
HDAC3-201ENST00000305264 DNAJC4Q9NNZ3 241 aa20.57■□□□□ 0.88
HDAC3-201ENST00000305264 SAP30O75446 220 aa20.56■□□□□ 0.88
HDAC3-201ENST00000305264 RAB2AP61019 212 aa20.56■□□□□ 0.88
HDAC3-201ENST00000305264 OR1L4Q8NGR5 311 aa20.56■□□□□ 0.88
HDAC3-201ENST00000305264 MARC2Q969Z3 335 aa20.56■□□□□ 0.88
HDAC3-201ENST00000305264 PFDN5Q99471 154 aa20.56■□□□□ 0.88
HDAC3-201ENST00000305264 SCRT1Q9BWW7 348 aa20.56■□□□□ 0.88
HDAC3-201ENST00000305264 ELOA3CA0A087WX78 387 aaPredicted RBP20.55■□□□□ 0.88
HDAC3-201ENST00000305264 CHEK1O14757 476 aa20.55■□□□□ 0.88
HDAC3-201ENST00000305264 SERF2P84101 59 aa20.55■□□□□ 0.88
HDAC3-201ENST00000305264 MORN5Q5VZ52 161 aa20.55■□□□□ 0.88
HDAC3-201ENST00000305264 LEMD1Q68G75 181 aa20.55■□□□□ 0.88
HDAC3-201ENST00000305264 LINC00305Q7Z4B0 112 aa20.55■□□□□ 0.88
HDAC3-201ENST00000305264 MLXQ9UH92 298 aa20.55■□□□□ 0.88
HDAC3-201ENST00000305264 H3BRN7 92 aa20.55■□□□□ 0.88
HDAC3-201ENST00000305264 TMED6Q8WW62 240 aa20.55■□□□□ 0.88
HDAC3-201ENST00000305264 BUB3O43684 328 aa20.54■□□□□ 0.88
HDAC3-201ENST00000305264 GATAD1Q8WUU5 269 aa20.54■□□□□ 0.88
HDAC3-201ENST00000305264 SHANK2-AS3Q9BTD1 123 aa20.54■□□□□ 0.88
HDAC3-201ENST00000305264 SEC11BP0C7V7 166 aa20.54■□□□□ 0.88
HDAC3-201ENST00000305264 M6PRP20645 277 aa20.54■□□□□ 0.88
HDAC3-201ENST00000305264 ACOT6Q3I5F7 207 aaPredicted RBP20.54■□□□□ 0.88
HDAC3-201ENST00000305264 PRR31Q5SQ13 230 aa20.54■□□□□ 0.88
HDAC3-201ENST00000305264 NARS2Q96I59 477 aaKnown RBP20.54■□□□□ 0.88
HDAC3-201ENST00000305264 SEPSECSQ9HD40 501 aaKnown RBP20.54■□□□□ 0.88
HDAC3-201ENST00000305264 SIGLEC8Q9NYZ4 499 aa20.54■□□□□ 0.88
HDAC3-201ENST00000305264 PLA2G2EQ9NZK7 142 aa20.54■□□□□ 0.88
HDAC3-201ENST00000305264 ZNF98A6NK75 572 aa20.53■□□□□ 0.88
HDAC3-201ENST00000305264 IGLL1P15814 213 aa20.53■□□□□ 0.88
HDAC3-201ENST00000305264 SPATA31B1PQ5VZV4 182 aa20.53■□□□□ 0.88
HDAC3-201ENST00000305264 RNF2Q99496 336 aa20.53■□□□□ 0.88
HDAC3-201ENST00000305264 SLC25A22Q9H936 323 aa20.53■□□□□ 0.88
HDAC3-201ENST00000305264 FAM78BQ5VT40 261 aa20.52■□□□□ 0.88
HDAC3-201ENST00000305264 DYNLRB2Q8TF09 96 aa20.52■□□□□ 0.87
HDAC3-201ENST00000305264 A0A1W2PS18 150 aa20.51■□□□□ 0.87
HDAC3-201ENST00000305264 OR10G4Q8NGN3 311 aa20.51■□□□□ 0.87
HDAC3-201ENST00000305264 OR10G9Q8NGN4 311 aa20.51■□□□□ 0.87
HDAC3-201ENST00000305264 OR10G7Q8NGN6 311 aa20.51■□□□□ 0.87
HDAC3-201ENST00000305264 EIF3GO75821 320 aaKnown RBP eCLIP20.5■□□□□ 0.87
HDAC3-201ENST00000305264 TMEM41BQ5BJD5 291 aa20.5■□□□□ 0.87
HDAC3-201ENST00000305264 C16orf54Q6UWD8 224 aa20.5■□□□□ 0.87
HDAC3-201ENST00000305264 MCRIP2Q9BUT9 160 aaKnown RBP20.5■□□□□ 0.87
HDAC3-201ENST00000305264 RPRMQ9NS64 109 aa20.5■□□□□ 0.87
HDAC3-201ENST00000305264 PFDN2Q9UHV9 154 aa20.5■□□□□ 0.87
HDAC3-201ENST00000305264 TRAV5A0A0B4J249 113 aa20.5■□□□□ 0.87
HDAC3-201ENST00000305264 AKR1C8PQ5T2L2 129 aa20.5■□□□□ 0.87
HDAC3-201ENST00000305264 MIR17HGQ75NE6 70 aa20.5■□□□□ 0.87
HDAC3-201ENST00000305264 RPP25LQ8N5L8 163 aaKnown RBP20.5■□□□□ 0.87
HDAC3-201ENST00000305264 GLMPQ8WWB7 406 aa20.5■□□□□ 0.87
HDAC3-201ENST00000305264 MBP02144 154 aa20.49■□□□□ 0.87
HDAC3-201ENST00000305264 BMI1P35226 326 aa20.49■□□□□ 0.87
HDAC3-201ENST00000305264 DEFB114Q30KQ6 69 aa20.49■□□□□ 0.87
HDAC3-201ENST00000305264 C9orf66Q5T8R8 295 aa20.49■□□□□ 0.87
HDAC3-201ENST00000305264 FAM122CQ6P4D5 195 aa20.49■□□□□ 0.87
HDAC3-201ENST00000305264 GRAMD2BQ96HH9 432 aa20.49■□□□□ 0.87
HDAC3-201ENST00000305264 TMEM231Q9H6L2 316 aa20.49■□□□□ 0.87
HDAC3-201ENST00000305264 FUT9Q9Y231 359 aa20.49■□□□□ 0.87
HDAC3-201ENST00000305264 S100A7AQ86SG5 101 aa20.48■□□□□ 0.87
HDAC3-201ENST00000305264 IGLV1-51P01701 117 aa20.48■□□□□ 0.87
HDAC3-201ENST00000305264 CD300EQ496F6 205 aaPredicted RBP20.48■□□□□ 0.87
HDAC3-201ENST00000305264 MRPL32Q9BYC8 188 aaKnown RBP20.48■□□□□ 0.87
HDAC3-201ENST00000305264 S100A7P31151 101 aa20.47■□□□□ 0.87
HDAC3-201ENST00000305264 RHOBP62745 196 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms