RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 ARHGAP21Q5T5U3 1957 aa11.14□□□□□ -0.63
TCF3-201ENST00000262965 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.14□□□□□ -0.63
TCF3-201ENST00000262965 NBR2O15453 112 aa11.14□□□□□ -0.63
TCF3-201ENST00000262965 ASIPP42127 132 aa11.14□□□□□ -0.63
TCF3-201ENST00000262965 SRSF7Q16629 238 aaKnown RBP eCLIP11.14□□□□□ -0.631e-6■■■■□ 21.6
TCF3-201ENST00000262965 CUL9Q8IWT3 2517 aa11.14□□□□□ -0.63
TCF3-201ENST00000262965 PAX9P55771 341 aa11.14□□□□□ -0.63
TCF3-201ENST00000262965 SUMO2P61956 95 aaKnown RBP11.14□□□□□ -0.63
TCF3-201ENST00000262965 FRMPD3Q5JV73 1810 aa11.14□□□□□ -0.63
TCF3-201ENST00000262965 FAM181BA6NEQ2 426 aa11.13□□□□□ -0.63
TCF3-201ENST00000262965 IGKV1-16P04430 117 aa11.13□□□□□ -0.63
TCF3-201ENST00000262965 B3GALT5-AS1P59052 145 aa11.13□□□□□ -0.63
TCF3-201ENST00000262965 NUP35Q8NFH5 326 aa11.13□□□□□ -0.63
TCF3-201ENST00000262965 WFDC12Q8WWY7 111 aa11.13□□□□□ -0.63
TCF3-201ENST00000262965 MRAP2Q96G30 205 aa11.13□□□□□ -0.63
TCF3-201ENST00000262965 C2orf88Q9BSF0 95 aa11.13□□□□□ -0.63
TCF3-201ENST00000262965 ZNF257Q9Y2Q1 563 aa11.13□□□□□ -0.63
TCF3-201ENST00000262965 A8MWP6 167 aa11.13□□□□□ -0.63
TCF3-201ENST00000262965 IGKV2-40A0A087WW87 121 aaPredicted RBP11.13□□□□□ -0.63
TCF3-201ENST00000262965 IGKV2D-40P01614 121 aaPredicted RBP11.13□□□□□ -0.63
TCF3-201ENST00000262965 FAM57AQ8TBR7 257 aa11.13□□□□□ -0.63
TCF3-201ENST00000262965 ORAOV1Q8WV07 137 aa11.12□□□□□ -0.63
TCF3-201ENST00000262965 CFPP27918 469 aa11.12□□□□□ -0.63
TCF3-201ENST00000262965 RNASE4P34096 147 aaKnown RBP11.12□□□□□ -0.63
TCF3-201ENST00000262965 VOPP1Q96AW1 172 aa11.12□□□□□ -0.63
TCF3-201ENST00000262965 HAX1O00165 279 aa11.12□□□□□ -0.63
TCF3-201ENST00000262965 SCGB1A1P11684 91 aa11.12□□□□□ -0.63
TCF3-201ENST00000262965 RPL15P61313 204 aaKnown RBP11.12□□□□□ -0.63
TCF3-201ENST00000262965 IGFL4Q6B9Z1 124 aa11.12□□□□□ -0.63
TCF3-201ENST00000262965 Q8TAT8 98 aa11.12□□□□□ -0.63
TCF3-201ENST00000262965 SNHG12Q9BXW3 62 aa11.12□□□□□ -0.63
TCF3-201ENST00000262965 ANAPC1Q9H1A4 1944 aa11.12□□□□□ -0.63
TCF3-201ENST00000262965 D6R8Y8 96 aa11.11□□□□□ -0.63
TCF3-201ENST00000262965 RNASE6Q93091 150 aaKnown RBP11.11□□□□□ -0.63
TCF3-201ENST00000262965 POLR3KQ9Y2Y1 108 aaPredicted RBP11.11□□□□□ -0.63
TCF3-201ENST00000262965 ANKHD1Q8IWZ3 2542 aaKnown RBP11.11□□□□□ -0.63
TCF3-201ENST00000262965 IGKV3D-20A0A0C4DH25 116 aa11.11□□□□□ -0.63
TCF3-201ENST00000262965 A0A1B0GW15 77 aa11.11□□□□□ -0.63
TCF3-201ENST00000262965 PPP1R17O96001 155 aa11.11□□□□□ -0.63
TCF3-201ENST00000262965 TCRAP04437 139 aa11.11□□□□□ -0.63
TCF3-201ENST00000262965 SRSF6Q13247 344 aaKnown RBP11.11□□□□□ -0.63
TCF3-201ENST00000262965 ZNF726P1Q15940 193 aa11.11□□□□□ -0.63
TCF3-201ENST00000262965 RSPO1Q2MKA7 263 aaPredicted RBP11.11□□□□□ -0.63
TCF3-201ENST00000262965 ST20Q9HBF5 79 aa11.11□□□□□ -0.63
TCF3-201ENST00000262965 PLXNB1O43157 2135 aa11.11□□□□□ -0.63
TCF3-201ENST00000262965 IGKV1D-17A0A075B6S4 117 aa11.11□□□□□ -0.63
TCF3-201ENST00000262965 IGHV2-70P01814 119 aa11.11□□□□□ -0.63
TCF3-201ENST00000262965 RHOGP84095 191 aa11.11□□□□□ -0.63
TCF3-201ENST00000262965 SMAGPQ0VAQ4 97 aa11.11□□□□□ -0.63
TCF3-201ENST00000262965 ASCL4Q6XD76 172 aa11.11□□□□□ -0.63
TCF3-201ENST00000262965 SNRPD3P62318 126 aaKnown RBP11.1□□□□□ -0.63
TCF3-201ENST00000262965 CIRBPQ14011 172 aaKnown RBP11.1□□□□□ -0.63
TCF3-201ENST00000262965 CDPF1Q6NVV7 123 aa11.1□□□□□ -0.63
TCF3-201ENST00000262965 OR5AN1Q8NGI8 311 aa11.1□□□□□ -0.63
TCF3-201ENST00000262965 A0A1B0GV72 72 aa11.1□□□□□ -0.63
TCF3-201ENST00000262965 IGKV1-39P01597 117 aa11.1□□□□□ -0.63
TCF3-201ENST00000262965 IGHV2-5P01817 119 aa11.1□□□□□ -0.63
TCF3-201ENST00000262965 IGKV1D-39P04432 117 aa11.1□□□□□ -0.63
TCF3-201ENST00000262965 SRD5A1P18405 259 aa11.1□□□□□ -0.63
TCF3-201ENST00000262965 GUSBP1Q15486 140 aa11.1□□□□□ -0.63
TCF3-201ENST00000262965 RRN3P1Q2M238 152 aa11.1□□□□□ -0.63
TCF3-201ENST00000262965 ASPHD1Q5U4P2 390 aa11.1□□□□□ -0.63
TCF3-201ENST00000262965 C8orf46Q8TAG6 207 aa11.1□□□□□ -0.63
TCF3-201ENST00000262965 MUC6Q6W4X9 2439 aa11.1□□□□□ -0.63
TCF3-201ENST00000262965 UBE2L6O14933 153 aa11.1□□□□□ -0.63
TCF3-201ENST00000262965 GTSCR1Q86UQ5 136 aa11.1□□□□□ -0.63
TCF3-201ENST00000262965 CENPFP49454 3210 aa11.1□□□□□ -0.63
TCF3-201ENST00000262965 FAM90A9PA6NNJ1 464 aa11.09□□□□□ -0.63
TCF3-201ENST00000262965 KLRB1Q12918 225 aa11.09□□□□□ -0.63
TCF3-201ENST00000262965 PVRIGQ6DKI7 326 aa11.09□□□□□ -0.63
TCF3-201ENST00000262965 DUX5Q96PT3 197 aa11.09□□□□□ -0.63
TCF3-201ENST00000262965 TRBV6-6A0A0A6YYG2 114 aa11.09□□□□□ -0.63
TCF3-201ENST00000262965 OR13C6PQ8NH95 151 aa11.09□□□□□ -0.63
TCF3-201ENST00000262965 DPM2O94777 84 aa11.09□□□□□ -0.63
TCF3-201ENST00000262965 TDGF1P3P51864 188 aa11.09□□□□□ -0.63
TCF3-201ENST00000262965 UCNP55089 124 aa11.09□□□□□ -0.63
TCF3-201ENST00000262965 TMEM200BQ69YZ2 307 aa11.09□□□□□ -0.63
TCF3-201ENST00000262965 ZNF114Q8NC26 417 aa11.09□□□□□ -0.63
TCF3-201ENST00000262965 NCOA6Q14686 2063 aaPredicted RBP11.09□□□□□ -0.63
TCF3-201ENST00000262965 A0A0U1RRA0 63 aa11.09□□□□□ -0.63
TCF3-201ENST00000262965 CD300EQ496F6 205 aaPredicted RBP11.09□□□□□ -0.63
TCF3-201ENST00000262965 SAMD13Q5VXD3 122 aa11.09□□□□□ -0.63
TCF3-201ENST00000262965 LYZL1Q6UWQ5 148 aa11.09□□□□□ -0.63
TCF3-201ENST00000262965 SLC25A39Q9BZJ4 359 aaPredicted RBP11.09□□□□□ -0.63
TCF3-201ENST00000262965 Q6ZS49 121 aa11.08□□□□□ -0.64
TCF3-201ENST00000262965 CENPVQ7Z7K6 275 aaPredicted RBP11.08□□□□□ -0.64
TCF3-201ENST00000262965 CHCHD1Q96BP2 118 aaKnown RBP11.08□□□□□ -0.64
TCF3-201ENST00000262965 SMKR1H3BMG3 65 aa11.08□□□□□ -0.64
TCF3-201ENST00000262965 CD7P09564 240 aa11.08□□□□□ -0.64
TCF3-201ENST00000262965 PAPPA-AS1Q5QFB9 102 aa11.08□□□□□ -0.64
TCF3-201ENST00000262965 FOXL2NBQ6ZUU3 175 aa11.08□□□□□ -0.64
TCF3-201ENST00000262965 RAX2Q96IS3 184 aa11.08□□□□□ -0.64
TCF3-201ENST00000262965 LY6HO94772 140 aa11.08□□□□□ -0.64
TCF3-201ENST00000262965 ATP5L2Q7Z4Y8 100 aa11.08□□□□□ -0.64
TCF3-201ENST00000262965 ZNF479Q96JC4 524 aa11.08□□□□□ -0.64
TCF3-201ENST00000262965 IGHV3-64A0A075B6Q5 118 aa11.07□□□□□ -0.64
TCF3-201ENST00000262965 OR4X2Q8NGF9 303 aa11.07□□□□□ -0.64
TCF3-201ENST00000262965 TOMM7Q9P0U1 55 aa11.07□□□□□ -0.64
TCF3-201ENST00000262965 TNFRSF18Q9Y5U5 241 aa11.07□□□□□ -0.64
TCF3-201ENST00000262965 SYS1-DBNDD2H3BUS1 97 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms