RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 TMEM136Q6ZRR5 245 aa11.27□□□□□ -0.6
CDH1-201ENST00000261769 ZNF833PQ6ZTB9 187 aa11.27□□□□□ -0.6
CDH1-201ENST00000261769 COPS9Q8WXC6 57 aa11.27□□□□□ -0.6
CDH1-201ENST00000261769 H0YIZ8 118 aa11.27□□□□□ -0.6
CDH1-201ENST00000261769 LCN12Q6JVE5 192 aa11.27□□□□□ -0.6
CDH1-201ENST00000261769 KLK15Q9H2R5 256 aa11.27□□□□□ -0.6
CDH1-201ENST00000261769 SRIP30626 198 aa11.27□□□□□ -0.61
CDH1-201ENST00000261769 SUMO2P61956 95 aaKnown RBP11.27□□□□□ -0.61
CDH1-201ENST00000261769 PUSL1Q8N0Z8 303 aaKnown RBP11.27□□□□□ -0.61
CDH1-201ENST00000261769 Q8NA96 180 aa11.27□□□□□ -0.61
CDH1-201ENST00000261769 C17orf58Q2M2W7 97 aa11.27□□□□□ -0.61
CDH1-201ENST00000261769 IFITM10A6NMD0 228 aa11.26□□□□□ -0.61
CDH1-201ENST00000261769 TOMM40O96008 361 aa11.26□□□□□ -0.61
CDH1-201ENST00000261769 ELANEP08246 267 aa11.26□□□□□ -0.61
CDH1-201ENST00000261769 FBLN7Q53RD9 439 aa11.26□□□□□ -0.61
CDH1-201ENST00000261769 RSPO3Q9BXY4 272 aaPredicted RBP11.26□□□□□ -0.61
CDH1-201ENST00000261769 E9PQ18 207 aa11.26□□□□□ -0.61
CDH1-201ENST00000261769 FNDC10F2Z333 226 aa11.26□□□□□ -0.61
CDH1-201ENST00000261769 RNASE2P10153 161 aaKnown RBP11.26□□□□□ -0.61
CDH1-201ENST00000261769 MDKP21741 143 aaPredicted RBP11.26□□□□□ -0.61
CDH1-201ENST00000261769 C5orf24Q7Z6I8 188 aa11.26□□□□□ -0.61
CDH1-201ENST00000261769 PRELID3AQ96N28 172 aa11.26□□□□□ -0.61
CDH1-201ENST00000261769 IL36BQ9NZH7 164 aa11.26□□□□□ -0.61
CDH1-201ENST00000261769 CACNG7P62955 275 aa11.26□□□□□ -0.61
CDH1-201ENST00000261769 CBY1Q9Y3M2 126 aa11.26□□□□□ -0.61
CDH1-201ENST00000261769 GNG5P63218 68 aa11.26□□□□□ -0.61
CDH1-201ENST00000261769 LINC00477Q96M19 166 aa11.26□□□□□ -0.61
CDH1-201ENST00000261769 YLPM1P49750 1951 aaKnown RBP11.26□□□□□ -0.61
CDH1-201ENST00000261769 IGHV4-61A0A0C4DH41 118 aa11.25□□□□□ -0.61
CDH1-201ENST00000261769 SRP19P09132 144 aaKnown RBP11.25□□□□□ -0.61
CDH1-201ENST00000261769 SONP18583 2426 aaKnown RBP11.25□□□□□ -0.61
CDH1-201ENST00000261769 A0A1W2PPI3 338 aa11.25□□□□□ -0.61
CDH1-201ENST00000261769 C2orf88Q9BSF0 95 aa11.25□□□□□ -0.61
CDH1-201ENST00000261769 SCRT1Q9BWW7 348 aa11.25□□□□□ -0.61
CDH1-201ENST00000261769 IGHV4-39P01824 125 aa11.25□□□□□ -0.61
CDH1-201ENST00000261769 DUX4L9Q6RFH8 374 aaPredicted RBP11.25□□□□□ -0.61
CDH1-201ENST00000261769 C10orf105Q8TEF2 133 aa11.25□□□□□ -0.61
CDH1-201ENST00000261769 C22orf46C9J442 243 aa11.25□□□□□ -0.61
CDH1-201ENST00000261769 HOXA3O43365 443 aaPredicted RBP11.25□□□□□ -0.61
CDH1-201ENST00000261769 PRSS2P07478 247 aa11.25□□□□□ -0.61
CDH1-201ENST00000261769 RPL35AP18077 110 aaKnown RBP11.25□□□□□ -0.61
CDH1-201ENST00000261769 ACTL10Q5JWF8 245 aa11.25□□□□□ -0.61
CDH1-201ENST00000261769 UBE2DNLQ8IWF7 75 aa11.25□□□□□ -0.61
CDH1-201ENST00000261769 PRDM13Q9H4Q3 707 aa11.25□□□□□ -0.61
CDH1-201ENST00000261769 VPREB3Q9UKI3 123 aa11.25□□□□□ -0.61
CDH1-201ENST00000261769 SHANK1Q9Y566 2161 aa11.25□□□□□ -0.61
CDH1-201ENST00000261769 A0A1B0GUS0 222 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 DIRC3C9JPN6 131 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 NDPQ00604 133 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 ALKBH7Q9BT30 221 aaPredicted RBP11.24□□□□□ -0.61
CDH1-201ENST00000261769 RFNGQ9Y644 331 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 IGHV4-30-2A0A087WSY4 118 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 STAG3L2P0CL84 134 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 STAG3L3P0CL85 134 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 IGF2RP11717 2491 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 TRAV9-1A0A075B6T8 112 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 IGKV1-6A0A0C4DH72 117 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 ZNF138P52744 262 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 BIVMQ86UB2 503 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 INSP01308 110 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 TRGC2P03986 189 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 LGALS3P17931 250 aaKnown RBP11.24□□□□□ -0.61
CDH1-201ENST00000261769 LINC00205P59089 165 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 LYPD1Q8N2G4 141 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 MBD3L1Q8WWY6 194 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 ZNRD1Q9P1U0 126 aa11.24□□□□□ -0.61
CDH1-201ENST00000261769 NDUFB8O95169 186 aa11.23□□□□□ -0.61
CDH1-201ENST00000261769 KIAA1644Q3SXP7 199 aa11.23□□□□□ -0.61
CDH1-201ENST00000261769 MEIG1Q5JSS6 88 aa11.23□□□□□ -0.61
CDH1-201ENST00000261769 IL17RELQ6ZVW7 336 aa11.23□□□□□ -0.61
CDH1-201ENST00000261769 F2Z2F3 143 aa11.23□□□□□ -0.61
CDH1-201ENST00000261769 IGLV3-1P01715 115 aa11.23□□□□□ -0.61
CDH1-201ENST00000261769 TMEM183AQ8IXX5 376 aa11.23□□□□□ -0.61
CDH1-201ENST00000261769 PRADC1Q9BSG0 188 aa11.23□□□□□ -0.61
CDH1-201ENST00000261769 DENND4CQ5VZ89 1909 aa11.23□□□□□ -0.61
CDH1-201ENST00000261769 NMUP48645 174 aa11.23□□□□□ -0.61
CDH1-201ENST00000261769 ORMDL3Q8N138 153 aa11.23□□□□□ -0.61
CDH1-201ENST00000261769 C1orf147Q96MC9 270 aaPredicted RBP11.23□□□□□ -0.61
CDH1-201ENST00000261769 FCN3O75636 299 aa11.23□□□□□ -0.61
CDH1-201ENST00000261769 AMBPP02760 352 aa11.23□□□□□ -0.61
CDH1-201ENST00000261769 DEFB112Q30KQ8 113 aa11.23□□□□□ -0.61
CDH1-201ENST00000261769 SEM1Q6ZVN7 128 aa11.23□□□□□ -0.61
CDH1-201ENST00000261769 MED13Q9UHV7 2174 aa11.22□□□□□ -0.61
CDH1-201ENST00000261769 TRAV5A0A0B4J249 113 aa11.22□□□□□ -0.61
CDH1-201ENST00000261769 ZNF415Q09FC8 603 aa11.22□□□□□ -0.61
CDH1-201ENST00000261769 C8orf31Q8N9H6 132 aa11.22□□□□□ -0.61
CDH1-201ENST00000261769 C5orf52A6NGY3 159 aa11.22□□□□□ -0.61
CDH1-201ENST00000261769 G3V318 75 aa11.22□□□□□ -0.61
CDH1-201ENST00000261769 ATP5LO75964 103 aa11.22□□□□□ -0.61
CDH1-201ENST00000261769 YPEL3P61236 119 aaPredicted RBP11.22□□□□□ -0.61
CDH1-201ENST00000261769 GCSAMLQ5JQS6 135 aa11.22□□□□□ -0.61
CDH1-201ENST00000261769 HSPB9Q9BQS6 159 aa11.22□□□□□ -0.61
CDH1-201ENST00000261769 NRN1Q9NPD7 142 aa11.22□□□□□ -0.61
CDH1-201ENST00000261769 ADAMTS9Q9P2N4 1935 aa11.22□□□□□ -0.61
CDH1-201ENST00000261769 MUC21A0A0G2JKD1 596 aa11.22□□□□□ -0.61
CDH1-201ENST00000261769 MUC21A0A140T8X8 626 aa11.22□□□□□ -0.61
CDH1-201ENST00000261769 SRRM4A7MD48 611 aaKnown RBP11.22□□□□□ -0.61
CDH1-201ENST00000261769 SLC17A3O00476 420 aa11.21□□□□□ -0.61
CDH1-201ENST00000261769 OR10J3Q5JRS4 329 aa11.21□□□□□ -0.61
CDH1-201ENST00000261769 TMEM238LA0A1B0GVL6 79 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms