RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 AHCTF1Q8WYP5 2266 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 CNTFRP26992 372 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 CSN1S1P47710 185 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 CEACAM16Q2WEN9 425 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 MRPL55Q7Z7F7 128 aaKnown RBP6.79□□□□□ -1.32
SPARC-201ENST00000231061 FOXC2Q99958 501 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 VGLL1Q99990 258 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 SH3BGRL3Q9H299 93 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 TRAV4A0A0B4J268 109 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 HSPB6O14558 160 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 SEC11BP0C7V7 166 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 FOXI1Q12951 378 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 IGFBP7Q16270 282 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 EML6Q6ZMW3 1958 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 IGKV1-12A0A0C4DH73 117 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 CDX4O14627 284 aaPredicted RBP6.79□□□□□ -1.32
SPARC-201ENST00000231061 IGKV1D-12P01611 117 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 IGF1P05019 195 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 C3orf79P0CE67 100 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 FOLR3P41439 243 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 SEC11AP67812 179 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 FOXL2NBQ6ZUU3 175 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 SCGB1C1Q8TD33 95 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 EEF1AKMT3Q96AZ1 226 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 C9orf85Q96MD7 179 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 FOXB1Q99853 325 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 PROK2Q9HC23 129 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 DLL3Q9NYJ7 618 aa6.79□□□□□ -1.32
SPARC-201ENST00000231061 CHEK1O14757 476 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 CRYGSP22914 178 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 RPS18P62269 152 aaKnown RBP6.78□□□□□ -1.32
SPARC-201ENST00000231061 BORCS7Q96B45 105 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 LSM4Q9Y4Z0 139 aaKnown RBP6.78□□□□□ -1.32
SPARC-201ENST00000231061 GGTLC3B5MD39 225 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 PDCD6O75340 191 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 LRTM2Q8N967 370 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 IMMP1LQ96LU5 166 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 GPHA2Q96T91 129 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 TMEM133Q9H2Q1 129 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 WDFY4Q6ZS81 3184 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 TNRC18O15417 2968 aaPredicted RBP6.78□□□□□ -1.32
SPARC-201ENST00000231061 H3BMG7 143 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 H7C1H1 209 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 SPINK2P20155 84 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 TAS2R45P59539 299 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 PMCHL1Q16048 86 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 GAGE2AQ6NT46 116 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 GTSCR1Q86UQ5 136 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 FGFBP3Q8TAT2 258 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 DOCK7Q96N67 2140 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 U3KQE9 123 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 ADAMTS20P59510 1910 aa6.78□□□□□ -1.32
SPARC-201ENST00000231061 DSCR8Q96T75 97 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 SIT1Q9Y3P8 196 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 NCOR2Q9Y618 2525 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 PI4KAP42356 2102 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 CEP192Q8TEP8 1941 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 TMEM262E9PQX1 116 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 TMEM250H0YL14 139 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 SSSCA1O60232 199 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 ZNF737O75373 536 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 PPYP01298 95 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 DANCRP0C864 163 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 CRISP2P16562 243 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 Q6ZQT7 251 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 OR8B3Q8NGG8 313 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 MDFICQ9P1T7 246 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 C3orf85A0A1B0GTC6 90 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 SRP19P09132 144 aaKnown RBP6.77□□□□□ -1.33
SPARC-201ENST00000231061 RFPL3SP0C7P2 107 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 HOXB4P17483 251 aaPredicted RBP6.77□□□□□ -1.33
SPARC-201ENST00000231061 UBE2E1P51965 193 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 PCBD1P61457 104 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 TPRX1Q8N7U7 411 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 OR2T10Q8NGZ9 312 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 UBE2E2Q96LR5 201 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 CFAP54Q96N23 3096 aa6.77□□□□□ -1.33
SPARC-201ENST00000231061 PRR30Q53SZ7 412 aaPredicted RBP6.76□□□□□ -1.33
SPARC-201ENST00000231061 MOB3BQ86TA1 216 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 PRR26Q8N8Z3 221 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 MBD6Q96DN6 1003 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 C18orf12Q96KH6 178 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 RPUSD1Q9UJJ7 312 aaKnown RBP6.76□□□□□ -1.33
SPARC-201ENST00000231061 PATE3B3GLJ2 98 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 PMVKQ15126 192 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 ZNF672Q499Z4 452 aaPredicted RBP6.76□□□□□ -1.33
SPARC-201ENST00000231061 GAGE13Q4V321 117 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 C9orf139Q6ZV77 190 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 PROCRQ9UNN8 238 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 CST7O76096 145 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 BCL3P20749 454 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 NMUP48645 174 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 TEX36Q5VZQ5 186 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 SLC35E4Q6ICL7 350 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 VKORC1Q9BQB6 163 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 TMEM242Q9NWH2 141 aa6.76□□□□□ -1.33
SPARC-201ENST00000231061 SHANK1Q9Y566 2161 aa6.75□□□□□ -1.33
SPARC-201ENST00000231061 F2Z2F3 143 aa6.75□□□□□ -1.33
SPARC-201ENST00000231061 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.75□□□□□ -1.33
SPARC-201ENST00000231061 CCL21O00585 134 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms