RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 YPEL1O60688 119 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 YPEL2Q96QA6 119 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 MRPL20Q9BYC9 149 aaKnown RBP7.36□□□□□ -1.23
TTC28-208ENST00000612946 SVIPQ8NHG7 77 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 WIPF2Q8TF74 440 aaPredicted RBP7.36□□□□□ -1.23
TTC28-208ENST00000612946 WFDC1Q9HC57 220 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 A0A1W2PPE3 182 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 TOMM40O96008 361 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 CTHRC1Q96CG8 243 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 MYMXA0A1B0GTQ4 84 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 C3AR1Q16581 482 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 FAM231DQ6ZW35 169 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 TMEM141Q96I45 108 aa7.36□□□□□ -1.23
TTC28-208ENST00000612946 SOCS3O14543 225 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 ZNF83P51522 516 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 NUP35Q8NFH5 326 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 C1orf43Q9BWL3 253 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 FOXA2Q9Y261 457 aaPredicted RBP7.35□□□□□ -1.23
TTC28-208ENST00000612946 RPL32P62910 135 aaKnown RBP7.35□□□□□ -1.23
TTC28-208ENST00000612946 FOXI3A8MTJ6 420 aaPredicted RBP7.35□□□□□ -1.23
TTC28-208ENST00000612946 C21orf140B9A014 251 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 C9orf172C9J069 976 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 H3BMG7 143 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 APOBEC3AP31941 199 aaPredicted RBP7.35□□□□□ -1.23
TTC28-208ENST00000612946 COL9A1P20849 921 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 NPFFR1Q9GZQ6 430 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 CRIM1Q9NZV1 1036 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 NPPCP23582 126 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 LGALS9BQ3B8N2 356 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 NMSQ5H8A3 153 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 LGALS9CQ6DKI2 356 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 LINC00114Q6XXX2 140 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 ACACBO00763 2458 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 PSG4Q00888 419 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 DEFB127Q9H1M4 99 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 UBL5Q9BZL1 73 aa7.35□□□□□ -1.23
TTC28-208ENST00000612946 TRBV6-6A0A0A6YYG2 114 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 IGFBP2P18065 325 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 PTCRAQ6ISU1 281 aaPredicted RBP7.34□□□□□ -1.23
TTC28-208ENST00000612946 TMEM54Q969K7 222 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 RNF166Q96A37 237 aaPredicted RBP7.34□□□□□ -1.23
TTC28-208ENST00000612946 hDV102S1A0JD36 115 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 SHISA7A6NL88 538 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 ECSCRQ19T08 205 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 GLMPQ8WWB7 406 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 NUP210LQ5VU65 1888 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 IGHV3-64DA0A0J9YX35 117 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 C9JAW5 83 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 COX7A1P24310 79 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 GFRA1P56159 465 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 SRSF2Q01130 221 aaKnown RBP7.34□□□□□ -1.23
TTC28-208ENST00000612946 MIR17HGQ75NE6 70 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 RPUSD1Q9UJJ7 312 aaKnown RBP7.34□□□□□ -1.23
TTC28-208ENST00000612946 IGLV3-21P80748 117 aaPredicted RBP7.34□□□□□ -1.23
TTC28-208ENST00000612946 PRCDQ00LT1 54 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 TRGV9Q99603 122 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 KIAA1549LQ6ZVL6 1849 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 PPIHO43447 177 aaKnown RBP7.34□□□□□ -1.23
TTC28-208ENST00000612946 CD3EP07766 207 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 LYPD6BQ8NI32 183 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 Q6ZWC4 215 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 CEND1Q8N111 149 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 ANKRD29Q8N6D5 301 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 DOPEY1Q5JWR5 2465 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 TRAV12-3A0A0B4J271 114 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 PFN1P07737 140 aaKnown RBP7.34□□□□□ -1.23
TTC28-208ENST00000612946 ETDBQ3ZM63 59 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 NPIPB3Q92617 1050 aa7.34□□□□□ -1.23
TTC28-208ENST00000612946 H0Y8X5 98 aa7.34□□□□□ -1.24
TTC28-208ENST00000612946 LOXL3P58215 753 aa7.34□□□□□ -1.24
TTC28-208ENST00000612946 EGR4Q05215 589 aa7.34□□□□□ -1.24
TTC28-208ENST00000612946 C18orf32Q8TCD1 76 aa7.34□□□□□ -1.24
TTC28-208ENST00000612946 CCL17Q92583 94 aa7.34□□□□□ -1.24
TTC28-208ENST00000612946 GFRA3O60609 400 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 PLPPR2Q96GM1 343 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 CLEC7AQ9BXN2 247 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 ZNHIT1O43257 154 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 DUTP33316 252 aaKnown RBP7.33□□□□□ -1.24
TTC28-208ENST00000612946 CDKN1AP38936 164 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 OR13A1Q8NGR1 328 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 CDCP2Q5VXM1 449 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 FOXH1O75593 365 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 ANKRD39Q53RE8 183 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 TRGV11A0A075B6L2 103 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 C1QTNF5Q9BXJ0 243 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 IGHV1OR21-1A0A087WYE8 117 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 CXCL10P02778 98 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 KLF5Q13887 457 aaPredicted RBP7.33□□□□□ -1.24
TTC28-208ENST00000612946 B5MCH6 92 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 C2CD4DB7Z1M9 353 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 IGKV1D-16P01601 117 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 PILRAQ9UKJ1 303 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 IGKV1D-42A0A075B6H8 117 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 RSPO2Q6UXX9 243 aaPredicted RBP7.33□□□□□ -1.24
TTC28-208ENST00000612946 C8orf46Q8TAG6 207 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 AMELYQ99218 206 aa7.33□□□□□ -1.24
TTC28-208ENST00000612946 D6R8Y8 96 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 VEGFBP49765 207 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 DSCAML1Q8TD84 2053 aa7.32□□□□□ -1.24
TTC28-208ENST00000612946 SHISA8B8ZZ34 492 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms