RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 ZNF90Q03938 601 aa20.99■□□□□ 0.95
SSBP4-206ENST00000599699 USF2Q15853 346 aaPredicted RBP20.99■□□□□ 0.95
SSBP4-206ENST00000599699 OR8G2PQ6IF36 304 aa20.99■□□□□ 0.95
SSBP4-206ENST00000599699 RAB40CQ96S21 281 aa20.99■□□□□ 0.95
SSBP4-206ENST00000599699 PBDC1Q9BVG4 233 aa20.99■□□□□ 0.95
SSBP4-206ENST00000599699 MS4A6AQ9H2W1 248 aa20.99■□□□□ 0.95
SSBP4-206ENST00000599699 IGKV1D-37A0A075B6S9 117 aa20.98■□□□□ 0.95
SSBP4-206ENST00000599699 IL5P05113 134 aa20.98■□□□□ 0.95
SSBP4-206ENST00000599699 NRARPQ7Z6K4 114 aa20.98■□□□□ 0.95
SSBP4-206ENST00000599699 CITED4Q96RK1 184 aa20.98■□□□□ 0.95
SSBP4-206ENST00000599699 GGTLC1Q9BX51 225 aa20.98■□□□□ 0.95
SSBP4-206ENST00000599699 RABAC1Q9UI14 185 aa20.98■□□□□ 0.95
SSBP4-206ENST00000599699 LOC102724200A0A096LPH7 203 aaPredicted RBP20.97■□□□□ 0.95
SSBP4-206ENST00000599699 PRSS46E5RG02 174 aa20.97■□□□□ 0.95
SSBP4-206ENST00000599699 MBPP02686 304 aaPredicted RBP20.97■□□□□ 0.95
SSBP4-206ENST00000599699 CMC4P56277 68 aaPredicted RBP20.97■□□□□ 0.95
SSBP4-206ENST00000599699 AKR1C1Q04828 323 aa20.97■□□□□ 0.95
SSBP4-206ENST00000599699 OR2F1Q13607 317 aa20.97■□□□□ 0.95
SSBP4-206ENST00000599699 ACOT7LQ6ZUV0 252 aa20.97■□□□□ 0.95
SSBP4-206ENST00000599699 RNF125Q96EQ8 232 aa20.97■□□□□ 0.95
SSBP4-206ENST00000599699 TRGV9Q99603 122 aa20.97■□□□□ 0.95
SSBP4-206ENST00000599699 GPN1Q9HCN4 374 aaPredicted RBP20.97■□□□□ 0.95
SSBP4-206ENST00000599699 STAB2Q8WWQ8 2551 aa20.96■□□□□ 0.95
SSBP4-206ENST00000599699 SMCO3A2RU48 225 aa20.96■□□□□ 0.95
SSBP4-206ENST00000599699 EIF2B2P49770 351 aaKnown RBP20.96■□□□□ 0.95
SSBP4-206ENST00000599699 PAX9P55771 341 aa20.96■□□□□ 0.95
SSBP4-206ENST00000599699 STXBP6Q8NFX7 210 aa20.96■□□□□ 0.95
SSBP4-206ENST00000599699 FAM110AQ9BQ89 295 aa20.96■□□□□ 0.95
SSBP4-206ENST00000599699 RCL1Q9Y2P8 373 aaKnown RBP20.96■□□□□ 0.95
SSBP4-206ENST00000599699 U3KQE9 123 aa20.96■□□□□ 0.95
SSBP4-206ENST00000599699 HUWE1Q7Z6Z7 4374 aaKnown RBP20.96■□□□□ 0.95
SSBP4-206ENST00000599699 L7N2F9 121 aa20.95■□□□□ 0.94
SSBP4-206ENST00000599699 LYZP61626 148 aa20.95■□□□□ 0.94
SSBP4-206ENST00000599699 VAMP2P63027 116 aa20.95■□□□□ 0.94
SSBP4-206ENST00000599699 GSG1LQ6UXU4 331 aa20.95■□□□□ 0.94
SSBP4-206ENST00000599699 APRG1Q8IVJ8 170 aa20.95■□□□□ 0.94
SSBP4-206ENST00000599699 THAP8Q8NA92 274 aa20.95■□□□□ 0.94
SSBP4-206ENST00000599699 C2orf50Q96LR7 162 aa20.95■□□□□ 0.94
SSBP4-206ENST00000599699 RETNQ9HD89 108 aa20.95■□□□□ 0.94
SSBP4-206ENST00000599699 LSM5Q9Y4Y9 91 aaKnown RBP20.95■□□□□ 0.94
SSBP4-206ENST00000599699 SNRPGP15A8MWD9 76 aa20.94■□□□□ 0.94
SSBP4-206ENST00000599699 METTL15P1P0C7V9 234 aa20.94■□□□□ 0.94
SSBP4-206ENST00000599699 TAS2R30P59541 319 aa20.94■□□□□ 0.94
SSBP4-206ENST00000599699 PFDN2Q9UHV9 154 aa20.94■□□□□ 0.94
SSBP4-206ENST00000599699 IGKV1OR2-108A0A075B7D4 117 aa20.93■□□□□ 0.94
SSBP4-206ENST00000599699 HELTA6NFD8 242 aa20.93■□□□□ 0.94
SSBP4-206ENST00000599699 TSC22D2O75157 780 aa20.93■□□□□ 0.94
SSBP4-206ENST00000599699 C16orf54Q6UWD8 224 aa20.93■□□□□ 0.94
SSBP4-206ENST00000599699 MAP6D1Q9H9H5 199 aa20.93■□□□□ 0.94
SSBP4-206ENST00000599699 NBEAL2Q6ZNJ1 2754 aa20.93■□□□□ 0.94
SSBP4-206ENST00000599699 TRAV2A0A0B4J234 112 aa20.92■□□□□ 0.94
SSBP4-206ENST00000599699 INMT-MINDY4F8WBC2 141 aa20.92■□□□□ 0.94
SSBP4-206ENST00000599699 RRAS2P62070 204 aaPredicted RBP20.92■□□□□ 0.94
SSBP4-206ENST00000599699 TMEM14EPQ6UXP3 125 aa20.92■□□□□ 0.94
SSBP4-206ENST00000599699 C7orf66A4D0T2 115 aa20.91■□□□□ 0.94
SSBP4-206ENST00000599699 CCNKO75909 580 aa20.91■□□□□ 0.94
SSBP4-206ENST00000599699 NUP62P37198 522 aaPredicted RBP20.91■□□□□ 0.94
SSBP4-206ENST00000599699 OR10P1Q8NGE3 313 aa20.91■□□□□ 0.94
SSBP4-206ENST00000599699 GLMPQ8WWB7 406 aa20.91■□□□□ 0.94
SSBP4-206ENST00000599699 TENM3Q9P273 2699 aa20.91■□□□□ 0.94
SSBP4-206ENST00000599699 PMS2P5A8MQ11 134 aa20.9■□□□□ 0.94
SSBP4-206ENST00000599699 K7EPK0 472 aa20.9■□□□□ 0.94
SSBP4-206ENST00000599699 PRAF2O60831 178 aa20.9■□□□□ 0.94
SSBP4-206ENST00000599699 RPL35AP18077 110 aaKnown RBP20.9■□□□□ 0.94
SSBP4-206ENST00000599699 BCAP31P51572 246 aa20.9■□□□□ 0.94
SSBP4-206ENST00000599699 AP2S1P53680 142 aaPredicted RBP20.9■□□□□ 0.94
SSBP4-206ENST00000599699 APOC4P55056 127 aa20.9■□□□□ 0.94
SSBP4-206ENST00000599699 S100A10P60903 97 aa20.9■□□□□ 0.94
SSBP4-206ENST00000599699 ZNF124Q15973 351 aa20.9■□□□□ 0.94
SSBP4-206ENST00000599699 PPP1R14BQ96C90 147 aa20.9■□□□□ 0.94
SSBP4-206ENST00000599699 BUB3O43684 328 aa20.89■□□□□ 0.93
SSBP4-206ENST00000599699 DLK1P80370 383 aa20.89■□□□□ 0.93
SSBP4-206ENST00000599699 TMEM144Q7Z5S9 345 aa20.89■□□□□ 0.93
SSBP4-206ENST00000599699 MGAT4CQ9UBM8 478 aa20.89■□□□□ 0.93
SSBP4-206ENST00000599699 CFDP00746 253 aaPredicted RBP20.88■□□□□ 0.93
SSBP4-206ENST00000599699 PVALBP20472 110 aaPredicted RBP20.88■□□□□ 0.93
SSBP4-206ENST00000599699 DEFB131AP59861 70 aa20.88■□□□□ 0.93
SSBP4-206ENST00000599699 SIGLEC15Q6ZMC9 328 aa20.88■□□□□ 0.93
SSBP4-206ENST00000599699 FAM24BQ8N5W8 94 aa20.88■□□□□ 0.93
SSBP4-206ENST00000599699 BPIFCQ8NFQ6 507 aa20.88■□□□□ 0.93
SSBP4-206ENST00000599699 K7EQG2 157 aa20.87■□□□□ 0.93
SSBP4-206ENST00000599699 CAV2P51636 162 aa20.87■□□□□ 0.93
SSBP4-206ENST00000599699 MARVELD1Q9BSK0 173 aa20.87■□□□□ 0.93
SSBP4-206ENST00000599699 GOSR2O14653 212 aa20.86■□□□□ 0.93
SSBP4-206ENST00000599699 GATA2P23769 480 aaPredicted RBP20.86■□□□□ 0.93
SSBP4-206ENST00000599699 LEMD1Q68G75 181 aa20.86■□□□□ 0.93
SSBP4-206ENST00000599699 ZNF688P0C7X2 276 aa20.85■□□□□ 0.93
SSBP4-206ENST00000599699 STPG3Q8N7X2 389 aa20.85■□□□□ 0.93
SSBP4-206ENST00000599699 DCANP1Q8TF63 244 aa20.85■□□□□ 0.93
SSBP4-206ENST00000599699 NPVFQ9HCQ7 196 aa20.85■□□□□ 0.93
SSBP4-206ENST00000599699 SIX6O95475 246 aa20.84■□□□□ 0.93
SSBP4-206ENST00000599699 ORM2P19652 201 aa20.84■□□□□ 0.93
SSBP4-206ENST00000599699 RAB32Q13637 225 aa20.84■□□□□ 0.93
SSBP4-206ENST00000599699 CYP2G1PQ6ZSU1 146 aa20.84■□□□□ 0.93
SSBP4-206ENST00000599699 KIR2DL5BA0A0G2JN68 375 aa20.83■□□□□ 0.93
SSBP4-206ENST00000599699 KIR2DL5BA0A0G2JPC4 375 aa20.83■□□□□ 0.93
SSBP4-206ENST00000599699 FNDC10F2Z333 226 aa20.83■□□□□ 0.93
SSBP4-206ENST00000599699 ARL16Q0P5N6 197 aa20.83■□□□□ 0.93
SSBP4-206ENST00000599699 TMEM182Q6ZP80 229 aaPredicted RBP20.83■□□□□ 0.93
SSBP4-206ENST00000599699 KIR2DL5AQ8N109 375 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 386.4 ms