RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 PAFAH1B2P68402 229 aa8.89□□□□□ -0.99
LIG1-217ENST00000599165 ID3Q02535 119 aa8.89□□□□□ -0.99
LIG1-217ENST00000599165 STXBP6Q8NFX7 210 aa8.89□□□□□ -0.99
LIG1-217ENST00000599165 OR51G1Q8NGK1 321 aa8.89□□□□□ -0.99
LIG1-217ENST00000599165 OR4D5Q8NGN0 318 aa8.89□□□□□ -0.99
LIG1-217ENST00000599165 IL17DQ8TAD2 202 aa8.89□□□□□ -0.99
LIG1-217ENST00000599165 GRAMD2BQ96HH9 432 aa8.89□□□□□ -0.99
LIG1-217ENST00000599165 CSTL1Q9H114 145 aa8.89□□□□□ -0.99
LIG1-217ENST00000599165 TMEM231Q9H6L2 316 aa8.89□□□□□ -0.99
LIG1-217ENST00000599165 RABAC1Q9UI14 185 aa8.89□□□□□ -0.99
LIG1-217ENST00000599165 PMS2P5A8MQ11 134 aa8.88□□□□□ -0.99
LIG1-217ENST00000599165 DNASE2O00115 360 aaPredicted RBP8.88□□□□□ -0.99
LIG1-217ENST00000599165 SCGB2A1O75556 95 aa8.88□□□□□ -0.99
LIG1-217ENST00000599165 ZNF688P0C7X2 276 aa8.88□□□□□ -0.99
LIG1-217ENST00000599165 RPL11P62913 178 aaKnown RBP8.88□□□□□ -0.99
LIG1-217ENST00000599165 GSG1LQ6UXU4 331 aa8.88□□□□□ -0.99
LIG1-217ENST00000599165 TMEM182Q6ZP80 229 aaPredicted RBP8.88□□□□□ -0.99
LIG1-217ENST00000599165 TRPT1Q86TN4 253 aaKnown RBP8.88□□□□□ -0.99
LIG1-217ENST00000599165 THAP8Q8NA92 274 aa8.88□□□□□ -0.99
LIG1-217ENST00000599165 RNF125Q96EQ8 232 aa8.88□□□□□ -0.99
LIG1-217ENST00000599165 PIGBOS1A0A0B4J2F0 54 aa8.87□□□□□ -0.99
LIG1-217ENST00000599165 KNCNA6PVL3 124 aa8.87□□□□□ -0.99
LIG1-217ENST00000599165 H3BP45 60 aa8.87□□□□□ -0.99
LIG1-217ENST00000599165 WRBO00258 174 aa8.87□□□□□ -0.99
LIG1-217ENST00000599165 CCNKO75909 580 aa8.87□□□□□ -0.99
LIG1-217ENST00000599165 C4BPBP20851 252 aa8.87□□□□□ -0.99
LIG1-217ENST00000599165 PAX9P55771 341 aa8.87□□□□□ -0.99
LIG1-217ENST00000599165 POLR2GP62487 172 aaKnown RBP eCLIP8.87□□□□□ -0.99
LIG1-217ENST00000599165 C17orf77Q96MU5 243 aa8.87□□□□□ -0.99
LIG1-217ENST00000599165 C7orf50Q9BRJ6 194 aaKnown RBP8.87□□□□□ -0.99
LIG1-217ENST00000599165 NDUFA13Q9P0J0 144 aa8.87□□□□□ -0.99
LIG1-217ENST00000599165 ZFP92A6NM28 416 aa8.86□□□□□ -0.99
LIG1-217ENST00000599165 INPP1P49441 399 aa8.86□□□□□ -0.99
LIG1-217ENST00000599165 EIF2B2P49770 351 aaKnown RBP8.86□□□□□ -0.99
LIG1-217ENST00000599165 SLC35E1Q96K37 410 aa8.86□□□□□ -0.99
LIG1-217ENST00000599165 TRGV9Q99603 122 aa8.86□□□□□ -0.99
LIG1-217ENST00000599165 HELTA6NFD8 242 aa8.85□□□□□ -0.99
LIG1-217ENST00000599165 SOCS3O14543 225 aa8.85□□□□□ -0.99
LIG1-217ENST00000599165 LYRM1O43325 122 aa8.85□□□□□ -0.99
LIG1-217ENST00000599165 MED6O75586 246 aa8.85□□□□□ -0.99
LIG1-217ENST00000599165 CA1P00915 261 aaPredicted RBP8.85□□□□□ -0.99
LIG1-217ENST00000599165 ATF4P18848 351 aaPredicted RBP8.85□□□□□ -0.99
LIG1-217ENST00000599165 DEFB1P60022 68 aa8.85□□□□□ -0.99
LIG1-217ENST00000599165 OR2F1Q13607 317 aa8.85□□□□□ -0.99
LIG1-217ENST00000599165 SPANXN5Q5MJ07 72 aa8.85□□□□□ -0.99
LIG1-217ENST00000599165 OR8G2PQ6IF36 304 aa8.85□□□□□ -0.99
LIG1-217ENST00000599165 SIGLEC15Q6ZMC9 328 aa8.85□□□□□ -0.99
LIG1-217ENST00000599165 ACOT7LQ6ZUV0 252 aa8.85□□□□□ -0.99
LIG1-217ENST00000599165 MITD1Q8WV92 249 aa8.85□□□□□ -0.99
LIG1-217ENST00000599165 NARS2Q96I59 477 aaKnown RBP8.85□□□□□ -0.99
LIG1-217ENST00000599165 CIB3Q96Q77 187 aaPredicted RBP8.85□□□□□ -0.99
LIG1-217ENST00000599165 WDR12Q9GZL7 423 aaKnown RBP8.85□□□□□ -0.99
LIG1-217ENST00000599165 C20orf85Q9H1P6 137 aa8.85□□□□□ -0.99
LIG1-217ENST00000599165 NRN1Q9NPD7 142 aa8.85□□□□□ -0.99
LIG1-217ENST00000599165 GATA2P23769 480 aaPredicted RBP8.84□□□□□ -0.99
LIG1-217ENST00000599165 NKX2-1P43699 371 aaPredicted RBP8.84□□□□□ -0.99
LIG1-217ENST00000599165 LYZP61626 148 aa8.84□□□□□ -0.99
LIG1-217ENST00000599165 RAB11AP62491 216 aa8.84□□□□□ -0.99
LIG1-217ENST00000599165 C4orf46Q504U0 113 aa8.84□□□□□ -0.99
LIG1-217ENST00000599165 PSMG4Q5JS54 123 aa8.84□□□□□ -0.99
LIG1-217ENST00000599165 CSNK1G2-AS1Q8NCQ2 148 aa8.84□□□□□ -0.99
LIG1-217ENST00000599165 COQ8AQ8NI60 647 aa8.84□□□□□ -0.99
LIG1-217ENST00000599165 GATAD1Q8WUU5 269 aa8.84□□□□□ -0.99
LIG1-217ENST00000599165 RAB40CQ96S21 281 aa8.84□□□□□ -0.99
LIG1-217ENST00000599165 PBDC1Q9BVG4 233 aa8.84□□□□□ -0.99
LIG1-217ENST00000599165 TBC1D24Q9ULP9 559 aa8.84□□□□□ -0.99
LIG1-217ENST00000599165 PAIP2BQ9ULR5 123 aaKnown RBP8.84□□□□□ -0.99
LIG1-217ENST00000599165 RCL1Q9Y2P8 373 aaKnown RBP8.84□□□□□ -0.99
LIG1-217ENST00000599165 VPS13DQ5THJ4 4388 aa8.84□□□□□ -0.99
LIG1-217ENST00000599165 A6NHS1 94 aa8.83□□□□□ -1
LIG1-217ENST00000599165 CENPXA8MT69 81 aa8.83□□□□□ -1
LIG1-217ENST00000599165 TCRBP04435 133 aa8.83□□□□□ -1
LIG1-217ENST00000599165 AP2S1P53680 142 aaPredicted RBP8.83□□□□□ -1
LIG1-217ENST00000599165 PMS2P11Q13670 270 aa8.83□□□□□ -1
LIG1-217ENST00000599165 ACTL10Q5JWF8 245 aa8.83□□□□□ -1
LIG1-217ENST00000599165 GDF5OSQ5U4N7 250 aa8.83□□□□□ -1
LIG1-217ENST00000599165 TMEM14EPQ6UXP3 125 aa8.83□□□□□ -1
LIG1-217ENST00000599165 STHQ8IWL8 128 aa8.83□□□□□ -1
LIG1-217ENST00000599165 ZBTB8BQ8NAP8 495 aaPredicted RBP8.83□□□□□ -1
LIG1-217ENST00000599165 Q8NAQ8 132 aa8.83□□□□□ -1
LIG1-217ENST00000599165 OR11H2Q8NH07 326 aa8.83□□□□□ -1
LIG1-217ENST00000599165 SMIM8Q96KF7 97 aa8.83□□□□□ -1
LIG1-217ENST00000599165 RARRES2Q99969 163 aa8.83□□□□□ -1
LIG1-217ENST00000599165 SEPSECSQ9HD40 501 aaKnown RBP8.83□□□□□ -1
LIG1-217ENST00000599165 SNRPGP15A8MWD9 76 aa8.82□□□□□ -1
LIG1-217ENST00000599165 CCSO14618 274 aa8.82□□□□□ -1
LIG1-217ENST00000599165 DEFB4AO15263 64 aa8.82□□□□□ -1
LIG1-217ENST00000599165 SSSCA1O60232 199 aa8.82□□□□□ -1
LIG1-217ENST00000599165 ARL16Q0P5N6 197 aa8.82□□□□□ -1
LIG1-217ENST00000599165 IAH1Q2TAA2 248 aaPredicted RBP8.82□□□□□ -1
LIG1-217ENST00000599165 CNPY1Q3B7I2 92 aa8.82□□□□□ -1
LIG1-217ENST00000599165 SEC22CQ9BRL7 303 aa8.82□□□□□ -1
LIG1-217ENST00000599165 CCDC32Q9BV29 185 aa8.82□□□□□ -1
LIG1-217ENST00000599165 C11orf68Q9H3H3 251 aaKnown RBP8.82□□□□□ -1
LIG1-217ENST00000599165 C11orf1Q9H5F2 150 aa8.82□□□□□ -1
LIG1-217ENST00000599165 PSENENQ9NZ42 101 aa8.82□□□□□ -1
LIG1-217ENST00000599165 STRAPQ9Y3F4 350 aaKnown RBP8.82□□□□□ -1
LIG1-217ENST00000599165 X6R8D5 127 aa8.82□□□□□ -1
LIG1-217ENST00000599165 BIRC6Q9NR09 4857 aa8.82□□□□□ -1
LIG1-217ENST00000599165 TRAV6A0A075B6T7 132 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms