RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 TMEM144Q7Z5S9 345 aa10.56□□□□□ -0.72
TRAF4-215ENST00000584944 S100A7AQ86SG5 101 aa10.56□□□□□ -0.72
TRAF4-215ENST00000584944 WDR89Q96FK6 387 aaPredicted RBP10.56□□□□□ -0.72
TRAF4-215ENST00000584944 TRGV9Q99603 122 aa10.56□□□□□ -0.72
TRAF4-215ENST00000584944 TMEM147Q9BVK8 224 aa10.56□□□□□ -0.72
TRAF4-215ENST00000584944 FXYD6-FXYD2A0A087WZ82 144 aa10.55□□□□□ -0.72
TRAF4-215ENST00000584944 UBE2L5PA0A1B0GUS4 154 aa10.55□□□□□ -0.72
TRAF4-215ENST00000584944 CCNKO75909 580 aa10.55□□□□□ -0.72
TRAF4-215ENST00000584944 PSG1P11464 419 aa10.55□□□□□ -0.72
TRAF4-215ENST00000584944 EIF2B2P49770 351 aaKnown RBP10.55□□□□□ -0.72
TRAF4-215ENST00000584944 LYZP61626 148 aa10.55□□□□□ -0.72
TRAF4-215ENST00000584944 SELENOTP62341 195 aa10.55□□□□□ -0.72
TRAF4-215ENST00000584944 RPL11P62913 178 aaKnown RBP10.55□□□□□ -0.72
TRAF4-215ENST00000584944 EWSR1Q01844 656 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRAF4-215ENST00000584944 GUCA2BQ16661 112 aa10.55□□□□□ -0.72
TRAF4-215ENST00000584944 OR5C1Q8NGR4 320 aa10.55□□□□□ -0.72
TRAF4-215ENST00000584944 SIGLEC8Q9NYZ4 499 aa10.55□□□□□ -0.72
TRAF4-215ENST00000584944 RABAC1Q9UI14 185 aa10.55□□□□□ -0.72
TRAF4-215ENST00000584944 hCG_2014768A0A024R1R8 64 aa10.54□□□□□ -0.72
TRAF4-215ENST00000584944 IGHV3-49A0A0A0MS15 119 aa10.54□□□□□ -0.72
TRAF4-215ENST00000584944 TMEM213A2RRL7 107 aa10.54□□□□□ -0.72
TRAF4-215ENST00000584944 PRSS46E5RG02 174 aa10.54□□□□□ -0.72
TRAF4-215ENST00000584944 ZNF90Q03938 601 aa10.54□□□□□ -0.72
TRAF4-215ENST00000584944 CLINT1Q14677 625 aa10.54□□□□□ -0.72
TRAF4-215ENST00000584944 BTNL8Q6UX41 500 aa10.54□□□□□ -0.72
TRAF4-215ENST00000584944 ZNF546Q86UE3 836 aa10.54□□□□□ -0.72
TRAF4-215ENST00000584944 ZNF709Q8N972 641 aa10.54□□□□□ -0.72
TRAF4-215ENST00000584944 THAP8Q8NA92 274 aa10.54□□□□□ -0.72
TRAF4-215ENST00000584944 OR2K2Q8NGT1 345 aa10.54□□□□□ -0.72
TRAF4-215ENST00000584944 RNF125Q96EQ8 232 aa10.54□□□□□ -0.72
TRAF4-215ENST00000584944 ZNF256Q9Y2P7 627 aaPredicted RBP10.54□□□□□ -0.72
TRAF4-215ENST00000584944 IGHV7-4-1A0A0J9YVY3 117 aa10.53□□□□□ -0.72
TRAF4-215ENST00000584944 H0YIZ8 118 aa10.53□□□□□ -0.72
TRAF4-215ENST00000584944 DFFBO76075 338 aa10.53□□□□□ -0.72
TRAF4-215ENST00000584944 IFNA5P01569 189 aa10.53□□□□□ -0.72
TRAF4-215ENST00000584944 CD5P06127 495 aa10.53□□□□□ -0.72
TRAF4-215ENST00000584944 HNRNPCP07910 306 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRAF4-215ENST00000584944 NHLH2Q02577 135 aa10.53□□□□□ -0.72
TRAF4-215ENST00000584944 CYP2G1PQ6ZSU1 146 aa10.53□□□□□ -0.72
TRAF4-215ENST00000584944 GTSCR1Q86UQ5 136 aa10.53□□□□□ -0.72
TRAF4-215ENST00000584944 HAPLN4Q86UW8 402 aa10.53□□□□□ -0.72
TRAF4-215ENST00000584944 SCGB1C1Q8TD33 95 aa10.53□□□□□ -0.72
TRAF4-215ENST00000584944 RNF126Q9BV68 326 aa10.53□□□□□ -0.72
TRAF4-215ENST00000584944 RHPN1-AS1Q9BWJ2 59 aa10.53□□□□□ -0.72
TRAF4-215ENST00000584944 C11orf1Q9H5F2 150 aa10.53□□□□□ -0.72
TRAF4-215ENST00000584944 SMPXQ9UHP9 88 aa10.53□□□□□ -0.72
TRAF4-215ENST00000584944 IGHV3OR16-13A0A075B7E8 117 aa10.52□□□□□ -0.73
TRAF4-215ENST00000584944 IGHV3-74A0A0B4J1X5 117 aa10.52□□□□□ -0.73
TRAF4-215ENST00000584944 PMS2P5A8MQ11 134 aa10.52□□□□□ -0.73
TRAF4-215ENST00000584944 IGLV1-51P01701 117 aa10.52□□□□□ -0.73
TRAF4-215ENST00000584944 ORM2P19652 201 aa10.52□□□□□ -0.73
TRAF4-215ENST00000584944 FGF7P21781 194 aa10.52□□□□□ -0.73
TRAF4-215ENST00000584944 CAMLGP49069 296 aa10.52□□□□□ -0.73
TRAF4-215ENST00000584944 PAFAH1B2P68402 229 aa10.52□□□□□ -0.73
TRAF4-215ENST00000584944 ARL16Q0P5N6 197 aa10.52□□□□□ -0.73
TRAF4-215ENST00000584944 CD300EQ496F6 205 aaPredicted RBP10.52□□□□□ -0.73
TRAF4-215ENST00000584944 IL34Q6ZMJ4 242 aa10.52□□□□□ -0.73
TRAF4-215ENST00000584944 OR1B1Q8NGR6 318 aa10.52□□□□□ -0.73
TRAF4-215ENST00000584944 ZFAND3Q9H8U3 227 aa10.52□□□□□ -0.73
TRAF4-215ENST00000584944 KCNIP2Q9NS61 270 aa10.52□□□□□ -0.73
TRAF4-215ENST00000584944 HSPB11Q9Y547 144 aa10.52□□□□□ -0.73
TRAF4-215ENST00000584944 IGHV3-66A0A0C4DH42 116 aa10.51□□□□□ -0.73
TRAF4-215ENST00000584944 C17orf112F2Z3M2 114 aa10.51□□□□□ -0.73
TRAF4-215ENST00000584944 MPDU1O75352 247 aa10.51□□□□□ -0.73
TRAF4-215ENST00000584944 OR5G3P0C626 314 aa10.51□□□□□ -0.73
TRAF4-215ENST00000584944 LINC00869P0C866 280 aa10.51□□□□□ -0.73
TRAF4-215ENST00000584944 GP9P14770 177 aa10.51□□□□□ -0.73
TRAF4-215ENST00000584944 AP2S1P53680 142 aaPredicted RBP10.51□□□□□ -0.73
TRAF4-215ENST00000584944 DEFB114Q30KQ6 69 aa10.51□□□□□ -0.73
TRAF4-215ENST00000584944 Q6ZNX1 250 aa10.51□□□□□ -0.73
TRAF4-215ENST00000584944 Q6ZRG5 221 aa10.51□□□□□ -0.73
TRAF4-215ENST00000584944 ATP5SQ99766 215 aa10.51□□□□□ -0.73
TRAF4-215ENST00000584944 SMIM3Q9BZL3 60 aa10.51□□□□□ -0.73
TRAF4-215ENST00000584944 RNF24Q9Y225 148 aa10.51□□□□□ -0.73
TRAF4-215ENST00000584944 IGKV1D-37A0A075B6S9 117 aa10.5□□□□□ -0.73
TRAF4-215ENST00000584944 TRAV25A0A0B4J276 109 aa10.5□□□□□ -0.73
TRAF4-215ENST00000584944 HELTA6NFD8 242 aa10.5□□□□□ -0.73
TRAF4-215ENST00000584944 DNASE2O00115 360 aaPredicted RBP10.5□□□□□ -0.73
TRAF4-215ENST00000584944 AGPAT2O15120 278 aa10.5□□□□□ -0.73
TRAF4-215ENST00000584944 HYPMO75409 117 aa10.5□□□□□ -0.73
TRAF4-215ENST00000584944 EGFEM1PQ0D2K5 195 aa10.5□□□□□ -0.73
TRAF4-215ENST00000584944 MRAPQ8TCY5 172 aa10.5□□□□□ -0.73
TRAF4-215ENST00000584944 DOK5Q9P104 306 aa10.5□□□□□ -0.73
TRAF4-215ENST00000584944 MLXQ9UH92 298 aa10.5□□□□□ -0.73
TRAF4-215ENST00000584944 SELENOKQ9Y6D0 94 aa10.5□□□□□ -0.73
TRAF4-215ENST00000584944 IGKV3-7A0A075B6H7 116 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 IGKV1OR2-108A0A075B7D4 117 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 WI2-2373I1.2A0A1W2PRP0 233 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 OR4C46A6NHA9 309 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 CHEK1O14757 476 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 COX7A2P2O60397 106 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 C8orf88P0DMB2 117 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 LYL1P12980 280 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 EDN2P20800 178 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 CRYBB3P26998 211 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 USF2Q15853 346 aaPredicted RBP10.49□□□□□ -0.73
TRAF4-215ENST00000584944 PXDC1Q5TGL8 231 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 TCF24Q7RTU0 167 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 TMEM61Q8N0U2 210 aa10.49□□□□□ -0.73
TRAF4-215ENST00000584944 ST8SIA2Q92186 375 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms