RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 MTCL1Q9Y4B5 1905 aaKnown RBP10.78□□□□□ -0.68
RNF43-208ENST00000584437 TRGV2A0A075B6R0 118 aa10.77□□□□□ -0.68
RNF43-208ENST00000584437 NPIPB5A8MRT5 1133 aa10.77□□□□□ -0.68
RNF43-208ENST00000584437 Q6ZS49 121 aa10.77□□□□□ -0.68
RNF43-208ENST00000584437 TMEM86BQ8N661 226 aa10.77□□□□□ -0.68
RNF43-208ENST00000584437 PARP14Q460N5 1801 aa10.77□□□□□ -0.68
RNF43-208ENST00000584437 NAA38Q9BRA0 125 aaKnown RBP10.77□□□□□ -0.69
RNF43-208ENST00000584437 SPTA1P02549 2419 aa10.77□□□□□ -0.69
RNF43-208ENST00000584437 GBF1Q92538 1859 aa10.77□□□□□ -0.69
RNF43-208ENST00000584437 PRR19A6NJB7 356 aa10.77□□□□□ -0.69
RNF43-208ENST00000584437 NABP1Q96AH0 204 aa10.77□□□□□ -0.69
RNF43-208ENST00000584437 QRFPP83859 136 aa10.77□□□□□ -0.69
RNF43-208ENST00000584437 C9orf106Q8NAJ2 232 aa10.77□□□□□ -0.69
RNF43-208ENST00000584437 LYZL1Q6UWQ5 148 aa10.76□□□□□ -0.69
RNF43-208ENST00000584437 TDRD6O60522 2096 aaKnown RBP10.76□□□□□ -0.69
RNF43-208ENST00000584437 LTBP4Q8N2S1 1624 aa10.76□□□□□ -0.69
RNF43-208ENST00000584437 PSG1P11464 419 aa10.76□□□□□ -0.69
RNF43-208ENST00000584437 OR10W1Q8NGF6 305 aa10.76□□□□□ -0.69
RNF43-208ENST00000584437 CCL19Q99731 98 aa10.76□□□□□ -0.69
RNF43-208ENST00000584437 FNDC10F2Z333 226 aa10.76□□□□□ -0.69
RNF43-208ENST00000584437 EREGO14944 169 aa10.76□□□□□ -0.69
RNF43-208ENST00000584437 GFRA3O60609 400 aa10.76□□□□□ -0.69
RNF43-208ENST00000584437 GTSF1LQ9H1H1 148 aa10.76□□□□□ -0.69
RNF43-208ENST00000584437 KIF26BQ2KJY2 2108 aa10.76□□□□□ -0.69
RNF43-208ENST00000584437 IGKV1-27A0A075B6S5 117 aa10.76□□□□□ -0.69
RNF43-208ENST00000584437 SRRM5B3KS81 715 aa10.76□□□□□ -0.69
RNF43-208ENST00000584437 LGALS1P09382 135 aaKnown RBP10.76□□□□□ -0.69
RNF43-208ENST00000584437 PRTN3P24158 256 aa10.76□□□□□ -0.69
RNF43-208ENST00000584437 TMEM155Q4W5P6 130 aa10.76□□□□□ -0.69
RNF43-208ENST00000584437 LYPD1Q8N2G4 141 aa10.76□□□□□ -0.69
RNF43-208ENST00000584437 IGKV3D-20A0A0C4DH25 116 aa10.75□□□□□ -0.69
RNF43-208ENST00000584437 PMS2P5A8MQ11 134 aa10.75□□□□□ -0.69
RNF43-208ENST00000584437 PF4P02776 101 aa10.75□□□□□ -0.69
RNF43-208ENST00000584437 COL4A5P29400 1685 aa10.75□□□□□ -0.69
RNF43-208ENST00000584437 SP9P0CG40 484 aa10.75□□□□□ -0.69
RNF43-208ENST00000584437 DMRTC2Q8IXT2 367 aaPredicted RBP10.75□□□□□ -0.69
RNF43-208ENST00000584437 ESPL1Q14674 2120 aa10.75□□□□□ -0.69
RNF43-208ENST00000584437 A0A1B0GWJ7 208 aa10.75□□□□□ -0.69
RNF43-208ENST00000584437 NCR2O95944 276 aa10.75□□□□□ -0.69
RNF43-208ENST00000584437 TAF1LQ8IZX4 1826 aa10.75□□□□□ -0.69
RNF43-208ENST00000584437 ZNF318Q5VUA4 2279 aa10.75□□□□□ -0.69
RNF43-208ENST00000584437 MALP21145 153 aa10.75□□□□□ -0.69
RNF43-208ENST00000584437 MST1LQ2TV78 715 aa10.75□□□□□ -0.69
RNF43-208ENST00000584437 S100A7L2Q5SY68 101 aa10.75□□□□□ -0.69
RNF43-208ENST00000584437 RNF5Q99942 180 aa10.75□□□□□ -0.69
RNF43-208ENST00000584437 HAX1O00165 279 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 IGHV3-11P01762 117 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 GLMPQ8WWB7 406 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 DPH3Q96FX2 82 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 MBNL3Q9NUK0 354 aaKnown RBP10.74□□□□□ -0.69
RNF43-208ENST00000584437 PATJQ8NI35 1801 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 TRAV8-1A0A0A6YYK1 113 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 SMAD7O15105 426 aaKnown RBP10.74□□□□□ -0.69
RNF43-208ENST00000584437 CRPP02741 224 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 SPSB3Q6PJ21 355 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 C2orf82Q6UX34 121 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 GFRA4Q9GZZ7 299 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 CFPP27918 469 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 FGFBP3Q8TAT2 258 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 POLR3KQ9Y2Y1 108 aaPredicted RBP10.74□□□□□ -0.69
RNF43-208ENST00000584437 DOCK4Q8N1I0 1966 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 OVOL2Q9BRP0 275 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 SIGLEC15Q6ZMC9 328 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 PHLDA1Q8WV24 401 aaPredicted RBP10.74□□□□□ -0.69
RNF43-208ENST00000584437 RFNGQ9Y644 331 aa10.74□□□□□ -0.69
RNF43-208ENST00000584437 TIMM23O14925 209 aa10.73□□□□□ -0.69
RNF43-208ENST00000584437 OCIAD2Q56VL3 154 aa10.73□□□□□ -0.69
RNF43-208ENST00000584437 LRRC37AA6NMS7 1700 aa10.73□□□□□ -0.69
RNF43-208ENST00000584437 EPOPA6NHQ4 379 aa10.73□□□□□ -0.69
RNF43-208ENST00000584437 PAX8Q06710 450 aa10.73□□□□□ -0.69
RNF43-208ENST00000584437 EXOC3-AS1Q8N2X6 119 aa10.73□□□□□ -0.69
RNF43-208ENST00000584437 IGKV2-40A0A087WW87 121 aaPredicted RBP10.73□□□□□ -0.69
RNF43-208ENST00000584437 IGKV2D-40P01614 121 aaPredicted RBP10.73□□□□□ -0.69
RNF43-208ENST00000584437 NTF4P34130 210 aa10.73□□□□□ -0.69
RNF43-208ENST00000584437 ZC2HC1BQ5TFG8 222 aa10.73□□□□□ -0.69
RNF43-208ENST00000584437 VWCEQ96DN2 955 aa10.73□□□□□ -0.69
RNF43-208ENST00000584437 IGHV1-18A0A0C4DH31 117 aa10.73□□□□□ -0.69
RNF43-208ENST00000584437 TOMM40O96008 361 aa10.73□□□□□ -0.69
RNF43-208ENST00000584437 CHAC1Q9BUX1 264 aa10.73□□□□□ -0.69
RNF43-208ENST00000584437 SCRT1Q9BWW7 348 aa10.73□□□□□ -0.69
RNF43-208ENST00000584437 DPH3P1Q9H4G8 78 aa10.73□□□□□ -0.69
RNF43-208ENST00000584437 TMEM8BA6NDV4 472 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 SPINK8P0C7L1 97 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 TMEM249Q2WGJ8 235 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 PNRC2Q9NPJ4 139 aaKnown RBP10.72□□□□□ -0.69
RNF43-208ENST00000584437 SCN10AQ9Y5Y9 1956 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 VCYO14598 125 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 EFNA2O43921 213 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 ZNF138P52744 262 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 PSG3Q16557 428 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 ADAMTSL5Q6ZMM2 481 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 MDC1Q14676 2089 aaKnown RBP10.72□□□□□ -0.69
RNF43-208ENST00000584437 MYOFQ9NZM1 2061 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 THSD7AQ9UPZ6 1657 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 C15orf62A8K5M9 175 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 TNFRSF6BO95407 300 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 TFF1P04155 84 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 PFN1P07737 140 aaKnown RBP10.72□□□□□ -0.69
RNF43-208ENST00000584437 ABHD17AQ96GS6 310 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 RALGAPA2Q2PPJ7 1873 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms