RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 ZFP92A6NM28 416 aa10.03□□□□□ -0.8
RAB40B-204ENST00000571554 HOXB5P09067 269 aa10.03□□□□□ -0.8
RAB40B-204ENST00000571554 GIG44P09565 113 aaPredicted RBP10.03□□□□□ -0.8
RAB40B-204ENST00000571554 EIF2B2P49770 351 aaKnown RBP10.03□□□□□ -0.8
RAB40B-204ENST00000571554 ZNF90Q03938 601 aa10.03□□□□□ -0.8
RAB40B-204ENST00000571554 GAMTQ14353 236 aa10.03□□□□□ -0.8
RAB40B-204ENST00000571554 RNF125Q96EQ8 232 aa10.03□□□□□ -0.8
RAB40B-204ENST00000571554 CACFD1Q9UGQ2 172 aa10.03□□□□□ -0.8
RAB40B-204ENST00000571554 IGKV1D-37A0A075B6S9 117 aa10.02□□□□□ -0.81
RAB40B-204ENST00000571554 BUB3O43684 328 aa10.02□□□□□ -0.81
RAB40B-204ENST00000571554 PITX3O75364 302 aa10.02□□□□□ -0.81
RAB40B-204ENST00000571554 SFT2D2O95562 160 aa10.02□□□□□ -0.81
RAB40B-204ENST00000571554 LYZP61626 148 aa10.02□□□□□ -0.81
RAB40B-204ENST00000571554 OR2F1Q13607 317 aa10.02□□□□□ -0.81
RAB40B-204ENST00000571554 SIGLEC15Q6ZMC9 328 aa10.02□□□□□ -0.81
RAB40B-204ENST00000571554 CENPSQ8N2Z9 138 aa10.02□□□□□ -0.81
RAB40B-204ENST00000571554 C11orf45Q8TAV5 145 aa10.02□□□□□ -0.81
RAB40B-204ENST00000571554 SLC35E1Q96K37 410 aa10.02□□□□□ -0.81
RAB40B-204ENST00000571554 SRRQ9GZT4 340 aa10.02□□□□□ -0.81
RAB40B-204ENST00000571554 KLK5Q9Y337 293 aaPredicted RBP10.02□□□□□ -0.81
RAB40B-204ENST00000571554 DUXBA0A1W2PPF3 345 aa10.01□□□□□ -0.81
RAB40B-204ENST00000571554 FAM90A26D6RGX4 464 aa10.01□□□□□ -0.81
RAB40B-204ENST00000571554 WRBO00258 174 aa10.01□□□□□ -0.81
RAB40B-204ENST00000571554 ATF4P18848 351 aaPredicted RBP10.01□□□□□ -0.81
RAB40B-204ENST00000571554 DEFB1P60022 68 aa10.01□□□□□ -0.81
RAB40B-204ENST00000571554 BAK1Q16611 211 aa10.01□□□□□ -0.81
RAB40B-204ENST00000571554 SPANXN2Q5MJ10 180 aa10.01□□□□□ -0.81
RAB40B-204ENST00000571554 RAB40CQ96S21 281 aa10.01□□□□□ -0.81
RAB40B-204ENST00000571554 SLC25A21Q9BQT8 299 aaPredicted RBP10.01□□□□□ -0.81
RAB40B-204ENST00000571554 C11orf68Q9H3H3 251 aaKnown RBP10.01□□□□□ -0.81
RAB40B-204ENST00000571554 IGHV4-28A0A0C4DH34 117 aa10□□□□□ -0.81
RAB40B-204ENST00000571554 H3BP45 60 aa10□□□□□ -0.81
RAB40B-204ENST00000571554 GPX4P36969 197 aaPredicted RBP10□□□□□ -0.81
RAB40B-204ENST00000571554 INPP1P49441 399 aa10□□□□□ -0.81
RAB40B-204ENST00000571554 AP2S1P53680 142 aaPredicted RBP10□□□□□ -0.81
RAB40B-204ENST00000571554 RAB11AP62491 216 aa10□□□□□ -0.81
RAB40B-204ENST00000571554 GGNBP1Q5YKI7 109 aa10□□□□□ -0.81
RAB40B-204ENST00000571554 LRTM2Q8N967 370 aa10□□□□□ -0.81
RAB40B-204ENST00000571554 Q8NAQ8 132 aa10□□□□□ -0.81
RAB40B-204ENST00000571554 NRN1Q9NPD7 142 aa10□□□□□ -0.81
RAB40B-204ENST00000571554 FLVCR2Q9UPI3 526 aa10□□□□□ -0.81
RAB40B-204ENST00000571554 IGKV1OR2-108A0A075B7D4 117 aa9.99□□□□□ -0.81
RAB40B-204ENST00000571554 ADAP1O75689 374 aa9.99□□□□□ -0.81
RAB40B-204ENST00000571554 RBMY1A1P0DJD3 496 aaKnown RBP9.99□□□□□ -0.81
RAB40B-204ENST00000571554 RBMY1CP0DJD4 496 aa9.99□□□□□ -0.81
RAB40B-204ENST00000571554 SPP1P10451 314 aa9.99□□□□□ -0.81
RAB40B-204ENST00000571554 SNRPD3P62318 126 aaKnown RBP9.99□□□□□ -0.81
RAB40B-204ENST00000571554 RBMY1FQ15415 496 aaKnown RBP9.99□□□□□ -0.81
RAB40B-204ENST00000571554 TRIQKQ629K1 86 aa9.99□□□□□ -0.81
RAB40B-204ENST00000571554 MORN3Q6PF18 240 aaPredicted RBP9.99□□□□□ -0.81
RAB40B-204ENST00000571554 WDR12Q9GZL7 423 aaKnown RBP9.99□□□□□ -0.81
RAB40B-204ENST00000571554 TMED3Q9Y3Q3 217 aa9.99□□□□□ -0.81
RAB40B-204ENST00000571554 BIRC6Q9NR09 4857 aa9.99□□□□□ -0.81
RAB40B-204ENST00000571554 SYNGR2O43760 224 aa9.98□□□□□ -0.81
RAB40B-204ENST00000571554 MED6O75586 246 aa9.98□□□□□ -0.81
RAB40B-204ENST00000571554 IGKV3-20P01619 116 aa9.98□□□□□ -0.81
RAB40B-204ENST00000571554 SLC25A6P12236 298 aa9.98□□□□□ -0.81
RAB40B-204ENST00000571554 FXYD7P58549 80 aa9.98□□□□□ -0.81
RAB40B-204ENST00000571554 SPANXN5Q5MJ07 72 aa9.98□□□□□ -0.81
RAB40B-204ENST00000571554 GDF5OSQ5U4N7 250 aa9.98□□□□□ -0.81
RAB40B-204ENST00000571554 PPP1R14BQ96C90 147 aa9.98□□□□□ -0.81
RAB40B-204ENST00000571554 XCL2Q9UBD3 114 aa9.98□□□□□ -0.81
RAB40B-204ENST00000571554 X6R8D5 127 aa9.98□□□□□ -0.81
RAB40B-204ENST00000571554 PIGBOS1A0A0B4J2F0 54 aa9.97□□□□□ -0.81
RAB40B-204ENST00000571554 C9orf170A2RU37 121 aa9.97□□□□□ -0.81
RAB40B-204ENST00000571554 DEDDO75618 318 aa9.97□□□□□ -0.81
RAB40B-204ENST00000571554 GATA2P23769 480 aaPredicted RBP9.97□□□□□ -0.81
RAB40B-204ENST00000571554 ATP5IP56385 69 aaPredicted RBP9.97□□□□□ -0.81
RAB40B-204ENST00000571554 OR8G2PQ6IF36 304 aa9.97□□□□□ -0.81
RAB40B-204ENST00000571554 RPP25LQ8N5L8 163 aaKnown RBP9.97□□□□□ -0.81
RAB40B-204ENST00000571554 LINC00052Q96N35 136 aa9.97□□□□□ -0.81
RAB40B-204ENST00000571554 SDHCQ99643 169 aaPredicted RBP9.97□□□□□ -0.81
RAB40B-204ENST00000571554 MFFQ9GZY8 342 aa9.97□□□□□ -0.81
RAB40B-204ENST00000571554 TBC1D24Q9ULP9 559 aa9.97□□□□□ -0.81
RAB40B-204ENST00000571554 ELOA3CA0A087WX78 387 aaPredicted RBP9.96□□□□□ -0.82
RAB40B-204ENST00000571554 SNRPGP15A8MWD9 76 aa9.96□□□□□ -0.82
RAB40B-204ENST00000571554 PRSS46E5RG02 174 aa9.96□□□□□ -0.82
RAB40B-204ENST00000571554 H3BMM0 161 aa9.96□□□□□ -0.82
RAB40B-204ENST00000571554 ZNF701M0R085 212 aaPredicted RBP9.96□□□□□ -0.82
RAB40B-204ENST00000571554 NDUFB6O95139 128 aa9.96□□□□□ -0.82
RAB40B-204ENST00000571554 FABP1P07148 127 aa9.96□□□□□ -0.82
RAB40B-204ENST00000571554 ANXA7P20073 488 aaKnown RBP9.96□□□□□ -0.82
RAB40B-204ENST00000571554 POLR2GP62487 172 aaKnown RBP eCLIP9.96□□□□□ -0.82
RAB40B-204ENST00000571554 TMEM182Q6ZP80 229 aaPredicted RBP9.96□□□□□ -0.82
RAB40B-204ENST00000571554 THAP8Q8NA92 274 aa9.96□□□□□ -0.82
RAB40B-204ENST00000571554 CSNK1G2-AS1Q8NCQ2 148 aa9.96□□□□□ -0.82
RAB40B-204ENST00000571554 DEDD2Q8WXF8 326 aa9.96□□□□□ -0.82
RAB40B-204ENST00000571554 CIB3Q96Q77 187 aaPredicted RBP9.96□□□□□ -0.82
RAB40B-204ENST00000571554 TRGV9Q99603 122 aa9.96□□□□□ -0.82
RAB40B-204ENST00000571554 SMCO3A2RU48 225 aa9.95□□□□□ -0.82
RAB40B-204ENST00000571554 ZNF705EA8MWA4 302 aaPredicted RBP9.95□□□□□ -0.82
RAB40B-204ENST00000571554 OR4E1P0C645 316 aa9.95□□□□□ -0.82
RAB40B-204ENST00000571554 MIFP14174 115 aa9.95□□□□□ -0.82
RAB40B-204ENST00000571554 BTCP35070 178 aa9.95□□□□□ -0.82
RAB40B-204ENST00000571554 UBE2MP61081 183 aaKnown RBP9.95□□□□□ -0.82
RAB40B-204ENST00000571554 RPP30P78346 268 aaKnown RBP9.95□□□□□ -0.82
RAB40B-204ENST00000571554 AKR1C1Q04828 323 aa9.95□□□□□ -0.82
RAB40B-204ENST00000571554 TMEM41BQ5BJD5 291 aa9.95□□□□□ -0.82
RAB40B-204ENST00000571554 ACOT7LQ6ZUV0 252 aa9.95□□□□□ -0.82
RAB40B-204ENST00000571554 ZNF767PQ75MW2 155 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms