RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 K7EIM0 57 aa11□□□□□ -0.65
COMMD4-225ENST00000569245 IFNA5P01569 189 aa11□□□□□ -0.65
COMMD4-225ENST00000569245 EIF5AP63241 154 aaKnown RBP11□□□□□ -0.65
COMMD4-225ENST00000569245 GAMTQ14353 236 aa11□□□□□ -0.65
COMMD4-225ENST00000569245 FAM106AQ4KMX7 169 aa11□□□□□ -0.65
COMMD4-225ENST00000569245 VN1R17PQ8TDU5 208 aa11□□□□□ -0.65
COMMD4-225ENST00000569245 SLC35E1Q96K37 410 aa11□□□□□ -0.65
COMMD4-225ENST00000569245 CCDC140Q96MF4 163 aa11□□□□□ -0.65
COMMD4-225ENST00000569245 ZNF471Q9BX82 626 aaPredicted RBP11□□□□□ -0.65
COMMD4-225ENST00000569245 WDR83OSQ9Y284 106 aa11□□□□□ -0.65
COMMD4-225ENST00000569245 MPDU1O75352 247 aa10.99□□□□□ -0.65
COMMD4-225ENST00000569245 LCN12Q6JVE5 192 aa10.99□□□□□ -0.65
COMMD4-225ENST00000569245 TMEM144Q7Z5S9 345 aa10.99□□□□□ -0.65
COMMD4-225ENST00000569245 TMEM116Q8NCL8 245 aa10.99□□□□□ -0.65
COMMD4-225ENST00000569245 DYNLRB2Q8TF09 96 aa10.99□□□□□ -0.65
COMMD4-225ENST00000569245 SCARB1Q8WTV0 552 aa10.99□□□□□ -0.65
COMMD4-225ENST00000569245 WDR61Q9GZS3 305 aaKnown RBP10.99□□□□□ -0.65
COMMD4-225ENST00000569245 SIGLEC8Q9NYZ4 499 aa10.99□□□□□ -0.65
COMMD4-225ENST00000569245 UBE2L5PA0A1B0GUS4 154 aa10.98□□□□□ -0.65
COMMD4-225ENST00000569245 TPT1P13693 172 aaKnown RBP10.98□□□□□ -0.65
COMMD4-225ENST00000569245 FCGR2BP31994 310 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-225ENST00000569245 GPR183P32249 361 aa10.98□□□□□ -0.65
COMMD4-225ENST00000569245 GPHB5Q86YW7 130 aa10.98□□□□□ -0.65
COMMD4-225ENST00000569245 BAP18Q8IXM2 172 aa10.98□□□□□ -0.65
COMMD4-225ENST00000569245 OR4X1Q8NH49 305 aa10.98□□□□□ -0.65
COMMD4-225ENST00000569245 SCGB1C1Q8TD33 95 aa10.98□□□□□ -0.65
COMMD4-225ENST00000569245 ST8SIA2Q92186 375 aa10.98□□□□□ -0.65
COMMD4-225ENST00000569245 GINS3Q9BRX5 216 aa10.98□□□□□ -0.65
COMMD4-225ENST00000569245 MRPL36Q9P0J6 103 aaKnown RBP10.98□□□□□ -0.65
COMMD4-225ENST00000569245 SORL1Q92673 2214 aa10.98□□□□□ -0.65
COMMD4-225ENST00000569245 IGHV3-21A0A0B4J1V1 117 aa10.97□□□□□ -0.65
COMMD4-225ENST00000569245 SMCO3A2RU48 225 aa10.97□□□□□ -0.65
COMMD4-225ENST00000569245 LGALS9O00182 355 aa10.97□□□□□ -0.65
COMMD4-225ENST00000569245 FRMD6-AS1P0C7T7 363 aa10.97□□□□□ -0.65
COMMD4-225ENST00000569245 FOLR2P14207 255 aa10.97□□□□□ -0.65
COMMD4-225ENST00000569245 RND2P52198 227 aa10.97□□□□□ -0.65
COMMD4-225ENST00000569245 AKR1C1Q04828 323 aa10.97□□□□□ -0.65
COMMD4-225ENST00000569245 TEPPQ6URK8 271 aa10.97□□□□□ -0.65
COMMD4-225ENST00000569245 GTSCR1Q86UQ5 136 aa10.97□□□□□ -0.65
COMMD4-225ENST00000569245 THAP8Q8NA92 274 aa10.97□□□□□ -0.65
COMMD4-225ENST00000569245 ZNF502Q8TBZ5 544 aa10.97□□□□□ -0.65
COMMD4-225ENST00000569245 ATP6V0BQ99437 205 aa10.97□□□□□ -0.65
COMMD4-225ENST00000569245 TXN2Q99757 166 aa10.97□□□□□ -0.65
COMMD4-225ENST00000569245 C21orf62Q9NYP8 219 aa10.97□□□□□ -0.65
COMMD4-225ENST00000569245 IGHV3-35A0A0C4DH35 117 aa10.96□□□□□ -0.65
COMMD4-225ENST00000569245 IZUMO1RA6ND01 250 aa10.96□□□□□ -0.65
COMMD4-225ENST00000569245 OR2T8A6NH00 312 aa10.96□□□□□ -0.65
COMMD4-225ENST00000569245 C2orf70A6NJV1 201 aa10.96□□□□□ -0.65
COMMD4-225ENST00000569245 CLN5O75503 358 aa10.96□□□□□ -0.65
COMMD4-225ENST00000569245 IGHV3-48P01763 117 aa10.96□□□□□ -0.65
COMMD4-225ENST00000569245 FGF7P21781 194 aa10.96□□□□□ -0.65
COMMD4-225ENST00000569245 NPBWR1P48145 328 aa10.96□□□□□ -0.65
COMMD4-225ENST00000569245 MFAP4P55083 255 aa10.96□□□□□ -0.65
COMMD4-225ENST00000569245 CD300EQ496F6 205 aaPredicted RBP10.96□□□□□ -0.65
COMMD4-225ENST00000569245 BTNL8Q6UX41 500 aa10.96□□□□□ -0.65
COMMD4-225ENST00000569245 OR2K2Q8NGT1 345 aa10.96□□□□□ -0.65
COMMD4-225ENST00000569245 NPIPB3Q92617 1050 aa10.96□□□□□ -0.65
COMMD4-225ENST00000569245 GNPNAT1Q96EK6 184 aaPredicted RBP10.96□□□□□ -0.65
COMMD4-225ENST00000569245 ACY3Q96HD9 319 aa10.96□□□□□ -0.65
COMMD4-225ENST00000569245 TIMM9Q9Y5J7 89 aa10.96□□□□□ -0.65
COMMD4-225ENST00000569245 U3KQK5 164 aa10.96□□□□□ -0.65
COMMD4-225ENST00000569245 IGKV1OR2-108A0A075B7D4 117 aa10.95□□□□□ -0.66
COMMD4-225ENST00000569245 IGHV4-30-4P0DP06 118 aa10.95□□□□□ -0.66
COMMD4-225ENST00000569245 EDN2P20800 178 aa10.95□□□□□ -0.66
COMMD4-225ENST00000569245 CBLN1P23435 193 aa10.95□□□□□ -0.66
COMMD4-225ENST00000569245 ATP6V0CP27449 155 aa10.95□□□□□ -0.66
COMMD4-225ENST00000569245 RAB31Q13636 194 aa10.95□□□□□ -0.66
COMMD4-225ENST00000569245 GUCA2BQ16661 112 aa10.95□□□□□ -0.66
COMMD4-225ENST00000569245 Q56UQ5 140 aa10.95□□□□□ -0.66
COMMD4-225ENST00000569245 ADAMTSL5Q6ZMM2 481 aa10.95□□□□□ -0.66
COMMD4-225ENST00000569245 Q8N1Y9 231 aa10.95□□□□□ -0.66
COMMD4-225ENST00000569245 HSD17B11Q8NBQ5 300 aa10.95□□□□□ -0.66
COMMD4-225ENST00000569245 PHYHIPLQ96FC7 376 aa10.95□□□□□ -0.66
COMMD4-225ENST00000569245 MGST2Q99735 147 aa10.95□□□□□ -0.66
COMMD4-225ENST00000569245 PSMG3Q9BT73 122 aaPredicted RBP10.95□□□□□ -0.66
COMMD4-225ENST00000569245 NPCDR1Q9BY65 106 aa10.95□□□□□ -0.66
COMMD4-225ENST00000569245 GAR1Q9NY12 217 aaKnown RBP10.95□□□□□ -0.66
COMMD4-225ENST00000569245 SELENOKQ9Y6D0 94 aa10.95□□□□□ -0.66
COMMD4-225ENST00000569245 IGKV1D-37A0A075B6S9 117 aa10.94□□□□□ -0.66
COMMD4-225ENST00000569245 TRAV30A0A087WSZ9 112 aa10.94□□□□□ -0.66
COMMD4-225ENST00000569245 F8W735 103 aaPredicted RBP10.94□□□□□ -0.66
COMMD4-225ENST00000569245 TGOLN2O43493 480 aa10.94□□□□□ -0.66
COMMD4-225ENST00000569245 SEC11BP0C7V7 166 aa10.94□□□□□ -0.66
COMMD4-225ENST00000569245 SPP1P10451 314 aa10.94□□□□□ -0.66
COMMD4-225ENST00000569245 DEFB114Q30KQ6 69 aa10.94□□□□□ -0.66
COMMD4-225ENST00000569245 TM4SF20Q53R12 229 aa10.94□□□□□ -0.66
COMMD4-225ENST00000569245 EIF5AL1Q6IS14 154 aaKnown RBP10.94□□□□□ -0.66
COMMD4-225ENST00000569245 SBSPONQ8IVN8 264 aa10.94□□□□□ -0.66
COMMD4-225ENST00000569245 TRGV9Q99603 122 aa10.94□□□□□ -0.66
COMMD4-225ENST00000569245 TUBA4BQ9H853 241 aa10.94□□□□□ -0.66
COMMD4-225ENST00000569245 TECRQ9NZ01 308 aaKnown RBP10.94□□□□□ -0.66
COMMD4-225ENST00000569245 C17orf112F2Z3M2 114 aa10.93□□□□□ -0.66
COMMD4-225ENST00000569245 AGPAT2O15120 278 aa10.93□□□□□ -0.66
COMMD4-225ENST00000569245 CFDP00746 253 aaPredicted RBP10.93□□□□□ -0.66
COMMD4-225ENST00000569245 IGLC1P0CG04 106 aa10.93□□□□□ -0.66
COMMD4-225ENST00000569245 OR10J1P30954 320 aa10.93□□□□□ -0.66
COMMD4-225ENST00000569245 CAMLGP49069 296 aa10.93□□□□□ -0.66
COMMD4-225ENST00000569245 TEX261Q6UWH6 196 aa10.93□□□□□ -0.66
COMMD4-225ENST00000569245 UNQ9165/PRO28630Q6UXU0 137 aa10.93□□□□□ -0.66
COMMD4-225ENST00000569245 ZNF709Q8N972 641 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms