RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 CHRDL1Q9BU40 450 aa14.52□□□□□ -0.08
COMMD4-213ENST00000565834 ACTR3CQ9C0K3 210 aaPredicted RBP14.52□□□□□ -0.08
COMMD4-213ENST00000565834 SLC25A22Q9H936 323 aa14.52□□□□□ -0.08
COMMD4-213ENST00000565834 TGOLN2O43493 480 aa14.52□□□□□ -0.09
COMMD4-213ENST00000565834 COX7A2P2O60397 106 aa14.52□□□□□ -0.09
COMMD4-213ENST00000565834 H2AFB1P0C5Y9 115 aa14.52□□□□□ -0.09
COMMD4-213ENST00000565834 ADMP35318 185 aa14.52□□□□□ -0.09
COMMD4-213ENST00000565834 CDC34P49427 236 aaPredicted RBP14.52□□□□□ -0.09
COMMD4-213ENST00000565834 ZNF726P1Q15940 193 aa14.52□□□□□ -0.09
COMMD4-213ENST00000565834 OR51G1Q8NGK1 321 aa14.52□□□□□ -0.09
COMMD4-213ENST00000565834 LINC01006Q8NI28 216 aa14.52□□□□□ -0.09
COMMD4-213ENST00000565834 PFDN5Q99471 154 aa14.52□□□□□ -0.09
COMMD4-213ENST00000565834 GNB4Q9HAV0 340 aa14.52□□□□□ -0.09
COMMD4-213ENST00000565834 DOK5Q9P104 306 aa14.52□□□□□ -0.09
COMMD4-213ENST00000565834 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.51□□□□□ -0.09
COMMD4-213ENST00000565834 A0A1W2PPV4 95 aa14.51□□□□□ -0.09
COMMD4-213ENST00000565834 SEC14L6B5MCN3 397 aa14.51□□□□□ -0.09
COMMD4-213ENST00000565834 RHOBP62745 196 aa14.51□□□□□ -0.09
COMMD4-213ENST00000565834 KIAA0141Q14154 515 aaPredicted RBP14.51□□□□□ -0.09
COMMD4-213ENST00000565834 ZNF343Q6P1L6 599 aa14.51□□□□□ -0.09
COMMD4-213ENST00000565834 OR5AU1Q8NGC0 362 aa14.51□□□□□ -0.09
COMMD4-213ENST00000565834 OR4X2Q8NGF9 303 aa14.51□□□□□ -0.09
COMMD4-213ENST00000565834 OR1L4Q8NGR5 311 aa14.51□□□□□ -0.09
COMMD4-213ENST00000565834 MYOZ3Q8TDC0 251 aa14.51□□□□□ -0.09
COMMD4-213ENST00000565834 Q8WTZ3 238 aa14.51□□□□□ -0.09
COMMD4-213ENST00000565834 C19orf24Q9BVV8 132 aa14.51□□□□□ -0.09
COMMD4-213ENST00000565834 HRH4Q9H3N8 390 aa14.51□□□□□ -0.09
COMMD4-213ENST00000565834 CTXND1A0A1B0GTU2 59 aa14.5□□□□□ -0.09
COMMD4-213ENST00000565834 ORM2P19652 201 aa14.5□□□□□ -0.09
COMMD4-213ENST00000565834 ARL3P36405 182 aa14.5□□□□□ -0.09
COMMD4-213ENST00000565834 PLP1P60201 277 aa14.5□□□□□ -0.09
COMMD4-213ENST00000565834 LYZP61626 148 aa14.5□□□□□ -0.09
COMMD4-213ENST00000565834 FAM209BQ5JX69 171 aa14.5□□□□□ -0.09
COMMD4-213ENST00000565834 SSX7Q7RTT5 188 aa14.5□□□□□ -0.09
COMMD4-213ENST00000565834 ZNF491Q8N8L2 437 aa14.5□□□□□ -0.09
COMMD4-213ENST00000565834 OR1B1Q8NGR6 318 aa14.5□□□□□ -0.09
COMMD4-213ENST00000565834 OR4F5Q8NH21 305 aa14.5□□□□□ -0.09
COMMD4-213ENST00000565834 GATAD1Q8WUU5 269 aa14.5□□□□□ -0.09
COMMD4-213ENST00000565834 SFT2D1Q8WV19 159 aa14.5□□□□□ -0.09
COMMD4-213ENST00000565834 DNAJC4Q9NNZ3 241 aa14.5□□□□□ -0.09
COMMD4-213ENST00000565834 SETD2Q9BYW2 2564 aaPredicted RBP14.5□□□□□ -0.09
COMMD4-213ENST00000565834 NIPBLQ6KC79 2804 aaeCLIP14.49□□□□□ -0.09
COMMD4-213ENST00000565834 PPP5D1E7EU14 171 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 HYPMO75409 117 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 OR5G3P0C626 314 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 SRSF2Q01130 221 aaKnown RBP14.49□□□□□ -0.09
COMMD4-213ENST00000565834 C10orf113Q5VZT2 155 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 ZNF600Q6ZNG1 722 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 TMEM37Q8WXS4 190 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 RAB24Q969Q5 203 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 RNF2Q99496 336 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 C2CD3Q4AC94 2353 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 ELOA3CA0A087WX78 387 aaPredicted RBP14.49□□□□□ -0.09
COMMD4-213ENST00000565834 MAP1LC3B2A6NCE7 125 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 IL4P05112 153 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 RELQ04864 619 aaPredicted RBP14.49□□□□□ -0.09
COMMD4-213ENST00000565834 FAM78BQ5VT40 261 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 LCN15Q6UWW0 184 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 MBD3L1Q8WWY6 194 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 RNF125Q96EQ8 232 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 OR5B12Q96R08 314 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 PBDC1Q9BVG4 233 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 MAP1LC3BQ9GZQ8 125 aa14.49□□□□□ -0.09
COMMD4-213ENST00000565834 SEPSECSQ9HD40 501 aaKnown RBP14.49□□□□□ -0.09
COMMD4-213ENST00000565834 A0A1B0GV50 99 aa14.48□□□□□ -0.09
COMMD4-213ENST00000565834 TEX46H3BTG2 121 aa14.48□□□□□ -0.09
COMMD4-213ENST00000565834 EIF3GO75821 320 aaKnown RBP eCLIP14.48□□□□□ -0.09
COMMD4-213ENST00000565834 OR2C1O95371 312 aa14.48□□□□□ -0.09
COMMD4-213ENST00000565834 TRBV12-3P01733 135 aa14.48□□□□□ -0.09
COMMD4-213ENST00000565834 HBE1P02100 147 aa14.48□□□□□ -0.09
COMMD4-213ENST00000565834 PATE2Q6UY27 113 aa14.48□□□□□ -0.09
COMMD4-213ENST00000565834 LYPD6BQ8NI32 183 aa14.48□□□□□ -0.09
COMMD4-213ENST00000565834 WIPF2Q8TF74 440 aaPredicted RBP14.48□□□□□ -0.09
COMMD4-213ENST00000565834 UBE2E2Q96LR5 201 aa14.48□□□□□ -0.09
COMMD4-213ENST00000565834 PFDN2Q9UHV9 154 aa14.48□□□□□ -0.09
COMMD4-213ENST00000565834 FUT9Q9Y231 359 aa14.48□□□□□ -0.09
COMMD4-213ENST00000565834 PUS1Q9Y606 427 aaKnown RBP eCLIP14.48□□□□□ -0.09
COMMD4-213ENST00000565834 IGHV3-35A0A0C4DH35 117 aa14.47□□□□□ -0.09
COMMD4-213ENST00000565834 WI2-2373I1.2A0A1W2PRP0 233 aa14.47□□□□□ -0.09
COMMD4-213ENST00000565834 HMGB3O15347 200 aaKnown RBP14.47□□□□□ -0.09
COMMD4-213ENST00000565834 SPATA31B1PQ5VZV4 182 aa14.47□□□□□ -0.09
COMMD4-213ENST00000565834 MRPL32Q9BYC8 188 aaKnown RBP14.47□□□□□ -0.09
COMMD4-213ENST00000565834 PEF1Q9UBV8 284 aaKnown RBP14.47□□□□□ -0.09
COMMD4-213ENST00000565834 HIGD1AQ9Y241 93 aa14.47□□□□□ -0.09
COMMD4-213ENST00000565834 TRAV1-1A0A0B4J248 108 aa14.46□□□□□ -0.09
COMMD4-213ENST00000565834 UHRF2Q96PU4 802 aa14.46□□□□□ -0.09
COMMD4-213ENST00000565834 RNF114Q9Y508 228 aa14.46□□□□□ -0.09
COMMD4-213ENST00000565834 CLPSL1A2RUU4 121 aa14.46□□□□□ -0.1
COMMD4-213ENST00000565834 LGALS1P09382 135 aaKnown RBP14.46□□□□□ -0.1
COMMD4-213ENST00000565834 FGF8P55075 233 aaPredicted RBP14.46□□□□□ -0.1
COMMD4-213ENST00000565834 TCTEX1D4Q5JR98 221 aa14.46□□□□□ -0.1
COMMD4-213ENST00000565834 MIR17HGQ75NE6 70 aa14.46□□□□□ -0.1
COMMD4-213ENST00000565834 LINC00305Q7Z4B0 112 aa14.46□□□□□ -0.1
COMMD4-213ENST00000565834 MED9Q9NWA0 146 aa14.46□□□□□ -0.1
COMMD4-213ENST00000565834 JMJD1CQ15652 2540 aa14.45□□□□□ -0.1
COMMD4-213ENST00000565834 HAX1O00165 279 aa14.45□□□□□ -0.1
COMMD4-213ENST00000565834 BMPR1BO00238 502 aa14.45□□□□□ -0.1
COMMD4-213ENST00000565834 USF2Q15853 346 aaPredicted RBP14.45□□□□□ -0.1
COMMD4-213ENST00000565834 KHDC1LQ5JSQ8 128 aa14.45□□□□□ -0.1
COMMD4-213ENST00000565834 TOMM20LQ6UXN7 152 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms