RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	HEATR5A	Q86XA9	2040 aa		3.02	□□□□□ -1.93
LRRC28-222	ENST00000561431	CACNA1D	Q01668	2161 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	TRAV38-1	A0A0B4J264	116 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	TRAV26-2	A0A0B4J265	109 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431		A0A0B4J2A0	478 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	DPRX	A6NFQ7	191 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	BBIP1	A8MTZ0	92 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	SRRM5	B3KS81	715 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431		H7C417	338 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	AIP	O00170	330 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	TRAF3IP2	O43734	574 aa	Predicted RBP	3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	GNG7	O60262	68 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	ZNF253	O75346	499 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	MRPL33	O75394	65 aa	Known RBP	3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	DHRS3	O75911	302 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	ARL6IP5	O75915	188 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	NDUFC2	O95298	119 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	BGLAP	P02818	100 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	CSN2	P05814	226 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	SOD3	P08294	240 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	RBMY1C	P0DJD4	496 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	SPN	P16150	400 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	RPL7	P18124	248 aa	Known RBP	3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	G6PC	P35575	357 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	RPL29	P47914	159 aa	Known RBP	3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	SLC25A1	P53007	311 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	COPZ1	P61923	177 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	MEF2C	Q06413	473 aa	Predicted RBP	3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	BSPH1	Q075Z2	132 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	C1D	Q13901	141 aa	Known RBP	3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	HSD17B12	Q53GQ0	312 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	SLC25A30	Q5SVS4	291 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	NCMAP	Q5T1S8	102 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	LCE1F	Q5T754	118 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	GLYAT	Q6IB77	296 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	PRSS54	Q6PEW0	395 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	CNIH2	Q6PI25	160 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	ARL9	Q6T311	187 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431		Q6ZN92	141 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	ZNF620	Q6ZNG0	422 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	C9orf62	Q8N4C0	152 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	ZFP41	Q8N8Y5	198 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	WFDC11	Q8NEX6	87 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	ZNF420	Q8TAQ5	688 aa	Predicted RBP	3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	MBD3L1	Q8WWY6	194 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	RNF185	Q96GF1	192 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	TMEM101	Q96IK0	257 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	PGLYRP4	Q96LB8	373 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	PRSS27	Q9BQR3	290 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	NDFIP1	Q9BT67	221 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	ZNF471	Q9BX82	626 aa	Predicted RBP	3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	C20orf85	Q9H1P6	137 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	CST9L	Q9H4G1	147 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	UQCC1	Q9NVA1	299 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	NAT8B	Q9UHF3	227 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	SHPK	Q9UHJ6	478 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	VSIG4	Q9Y279	399 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	LAMTOR2	Q9Y2Q5	125 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	ORC6	Q9Y5N6	252 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	SLC25A15	Q9Y619	301 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	NSD1	Q96L73	2696 aa	Predicted RBP	3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	PRRC2A	P48634	2157 aa	Known RBP	3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	F8	P00451	2351 aa		3.01	□□□□□ -1.93
LRRC28-222	ENST00000561431	CREBBP	Q92793	2442 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	SETD2	Q9BYW2	2564 aa	Predicted RBP	3	□□□□□ -1.93
LRRC28-222	ENST00000561431	IGKV1D-13	A0A0B4J2D9	117 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	LOC102725191	A0A1B0GVB3	256 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	SMIM31	A0A1B0GVY4	71 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	C5orf49	A4QMS7	147 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	C5orf63	A6NC05	138 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	LINC00862	A6NCI5	91 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	CPSF4L	A6NMK7	179 aa	Known RBP	3	□□□□□ -1.93
LRRC28-222	ENST00000561431	ZNF850	A8MQ14	1090 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	FABP5P3	A8MUU1	101 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	FAM220BP	B1ANY3	271 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	RPL36A-HNRNPH2	H7BZ11	118 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	SLC17A2	O00624	439 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	MYL12B	O14950	172 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	NRAS	P01111	189 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	CRYBA1	P05813	215 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	SCT	P09683	121 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	SMIM17	P0DL12	118 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	IGKV1-13	P0DP09	117 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	PGAM2	P15259	253 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	PRSS3	P35030	304 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	DAD1	P61803	113 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	SNRPD2	P62316	118 aa	Known RBP	3	□□□□□ -1.93
LRRC28-222	ENST00000561431	ARFRP1	Q13795	201 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	ZNF266	Q14584	549 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	GSG1	Q2KHT4	349 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	C12orf74	Q32Q52	190 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	IBA57	Q5T440	356 aa	Known RBP	3	□□□□□ -1.93
LRRC28-222	ENST00000561431	IL34	Q6ZMJ4	242 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	ZNF767P	Q75MW2	155 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	AAED1	Q7RTV5	226 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	TMEM179B	Q7Z7N9	219 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	FAM71E2	Q8N5Q1	922 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	OR13C8	Q8NGS7	320 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	TYMSOS	Q8TAI1	123 aa		3	□□□□□ -1.93
LRRC28-222	ENST00000561431	ZNF418	Q8TF45	676 aa	Predicted RBP	3	□□□□□ -1.93

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