RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 JPT1Q9UK76 154 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 ING4Q9UNL4 249 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 ST3GAL6Q9Y274 331 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF257Q9Y2Q1 563 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 GMPPBQ9Y5P6 360 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 RFNGQ9Y644 331 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 V9GYH0 126 aa1.85□□□□□ -2.11
LRRC28-218ENST00000560236 MUC17Q685J3 4493 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 IGKV2D-24A0A075B6R9 120 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 IGHV3-43A0A0B4J1X8 118 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 A0A1B0GTI1 187 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 H0YJW9 148 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 NDUFA4O00483 81 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 CREBL2O60519 120 aaPredicted RBP1.84□□□□□ -2.11
LRRC28-218ENST00000560236 GPX5O75715 221 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 CST1P01037 141 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 IGLV2-8P01709 118 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 GYPBP06028 91 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 CRYGBP07316 175 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 SAA2P0DJI9 122 aaPredicted RBP1.84□□□□□ -2.11
LRRC28-218ENST00000560236 CT45A6P0DMU7 189 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 CT45A5P0DMU8 189 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 CT45A7P0DMV0 189 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 IGHV3-43DP0DP04 118 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 CALCBP10092 127 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 HTN3P15516 51 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 CD36P16671 472 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF3P17036 446 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 ALOX5APP20292 161 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 HLA-DMAP28067 261 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 RCVRNP35243 200 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 TGFBR1P36897 503 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 SMIM11AP58511 58 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 VBP1P61758 197 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 DAD1P61803 113 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 SNRPGP62308 76 aaKnown RBP1.84□□□□□ -2.11
LRRC28-218ENST00000560236 HTD2P86397 168 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 DEFA5Q01523 94 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 TSPAN31Q12999 210 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 CDK10Q15131 360 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 SSX1Q16384 188 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 KLK9Q2XQG4 91 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 Q5BKY6 102 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 FAM222AQ5U5X8 452 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 NXNL2Q5VZ03 156 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF705AQ6ZN79 300 aaPredicted RBP1.84□□□□□ -2.11
LRRC28-218ENST00000560236 UTS2BQ765I0 119 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 MOB1BQ7L9L4 216 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 AKAP14Q86UN6 197 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 PDPNQ86YL7 162 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 SNX29P2Q8IUI4 249 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 TCTE3Q8IZS6 198 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 SLC7A5P1Q8MH63 180 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 HSD17B11Q8NBQ5 300 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 ZNF555Q8NEP9 628 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 MCFD2Q8NI22 146 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 PLPPR1Q8TBJ4 325 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 GNPDA2Q8TDQ7 276 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 ASB17Q8WXJ9 295 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 RBPMSQ93062 196 aaKnown RBP1.84□□□□□ -2.11
LRRC28-218ENST00000560236 OPALINQ96PE5 141 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 IL4I1Q96RQ9 567 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 SPIN2AQ99865 258 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 APOL4Q9BPW4 351 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 SPIN2BQ9BPZ2 258 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 SRRQ9GZT4 340 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 MIXL1Q9H2W2 232 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 OR2S2Q9NQN1 319 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 SCN3BQ9NY72 215 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 IL20Q9NYY1 176 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 LAMP5Q9UJQ1 280 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 KLK9Q9UKQ9 250 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 MRPS16Q9Y3D3 137 aaKnown RBP1.84□□□□□ -2.11
LRRC28-218ENST00000560236 STRAPQ9Y3F4 350 aaKnown RBP1.84□□□□□ -2.11
LRRC28-218ENST00000560236 PEX16Q9Y5Y5 336 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 TMEM14AQ9Y6G1 99 aa1.84□□□□□ -2.11
LRRC28-218ENST00000560236 IGHV3OR16-8A0A075B7F1 116 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 IGKV1-12A0A0C4DH73 117 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 PNMA8CA0A1B0GUJ8 204 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 LOC105371267A0A1B0GV96 52 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 RNF222A6NCQ9 220 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 EFCAB10A6NFE3 127 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 A6NIN4 97 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 RIIAD1A6NNX1 92 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 ZNF705FA8MVS1 300 aaPredicted RBP1.83□□□□□ -2.12
LRRC28-218ENST00000560236 ZNF670-ZNF695F2Z2N8 137 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 H3BNG1 76 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 DNASE2O00115 360 aaPredicted RBP1.83□□□□□ -2.12
LRRC28-218ENST00000560236 AIPO00170 330 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 ITGB1BP1O14713 200 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 SIVA1O15304 175 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 OR2J3O76001 311 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 IGKV1D-12P01611 117 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 HBZP02008 142 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 APOA2P02652 100 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 MT-ND4P03905 459 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 ATP5G1P05496 136 aa1.83□□□□□ -2.12
LRRC28-218ENST00000560236 ZNF705DP0CH99 300 aaPredicted RBP1.83□□□□□ -2.12
LRRC28-218ENST00000560236 ZNF705BP0CI00 300 aaPredicted RBP1.83□□□□□ -2.12
LRRC28-218ENST00000560236 ANXA8P13928 327 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms