RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 TMEM14CQ9P0S9 112 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 MINOS1-NBL1R4GNA1 71 aa6.45□□□□□ -1.38
SMAD3-212ENST00000559937 SMIM27A0A1W2PRY6 76 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 A6NNC1 897 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 I3L2K1 104 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 J3QKU1 62 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 SLC17A3O00476 420 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 MOSP00540 346 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 PYYP10082 97 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 ESDP10768 282 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 GP9P14770 177 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 HNF1AP20823 631 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 ADMP35318 185 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 CX3CL1P78423 397 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 EBI3Q14213 229 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 PLGLAQ15195 96 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 CDSNQ15517 529 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 TMEM183BQ1AE95 376 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 PDZD11Q5EBL8 140 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 IBA57Q5T440 356 aaKnown RBP6.44□□□□□ -1.38
SMAD3-212ENST00000559937 S100A7AQ86SG5 101 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 GBGT1Q8N5D6 347 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 ZNF48Q96MX3 618 aaPredicted RBP6.44□□□□□ -1.38
SMAD3-212ENST00000559937 RBM14Q96PK6 669 aaKnown RBP6.44□□□□□ -1.38
SMAD3-212ENST00000559937 RNF24Q9Y225 148 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 HIGD1AQ9Y241 93 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 KLF12Q9Y4X4 402 aa6.44□□□□□ -1.38
SMAD3-212ENST00000559937 TRAV30A0A087WSZ9 112 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 TRBV6-1A0A0K0K1D8 114 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 NPIPB5A8MRT5 1133 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 LINC00587B1AMM8 73 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 GOSR1O95249 250 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 HLA-DQA1P01909 254 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 NBEAP1P0C6P0 100 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 IGLC1P0CG04 106 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 ARF6P62330 175 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 Q0VG73 95 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 OR5I1Q13606 314 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 MMDQ15546 238 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 C5orf64Q2M2E5 130 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 C5orf17Q8NAS9 161 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 OR1B1Q8NGR6 318 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 MBD6Q96DN6 1003 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 GRAMD2BQ96HH9 432 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 FMC1Q96HJ9 113 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 TMEM68Q96MH6 324 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 WNT10AQ9GZT5 417 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 MRPL18Q9H0U6 180 aaKnown RBP6.43□□□□□ -1.38
SMAD3-212ENST00000559937 EPDR1Q9UM22 224 aa6.43□□□□□ -1.38
SMAD3-212ENST00000559937 TBL2Q9Y4P3 447 aaKnown RBP6.43□□□□□ -1.38
SMAD3-212ENST00000559937 IZUMO1RA6ND01 250 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 K7EIM0 57 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 FCN1O00602 326 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 GATCO43716 136 aaKnown RBP6.42□□□□□ -1.38
SMAD3-212ENST00000559937 CNIH1O95406 144 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 TOMM40O96008 361 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 IGHV3-48P01763 117 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 AMY1AP04745 511 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 SLC25A5P05141 298 aaKnown RBP6.42□□□□□ -1.38
SMAD3-212ENST00000559937 HIST1H1EP10412 219 aaKnown RBP6.42□□□□□ -1.38
SMAD3-212ENST00000559937 MGST1P10620 155 aaKnown RBP6.42□□□□□ -1.38
SMAD3-212ENST00000559937 ORM2P19652 201 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 DLX1P56177 255 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 PKIAP61925 76 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 UBE2G1P62253 170 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 PAFAH1B2P68402 229 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 LDLRAD2Q5SZI1 272 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 VMO1Q7Z5L0 202 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 BAGE2Q86Y30 109 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 OR8I2Q8N0Y5 310 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 Q8N6K4 173 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 WIPF2Q8TF74 440 aaPredicted RBP6.42□□□□□ -1.38
SMAD3-212ENST00000559937 IGFBPL1Q8WX77 278 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 RASL11BQ9BPW5 248 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 ATG101Q9BSB4 218 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 SIRPDQ9H106 197 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 PRDM13Q9H4Q3 707 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 MRPL27Q9P0M9 148 aaKnown RBP6.42□□□□□ -1.38
SMAD3-212ENST00000559937 ZNF492Q9P255 531 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 ABCA4P78363 2273 aa6.42□□□□□ -1.38
SMAD3-212ENST00000559937 PGPA6NDG6 321 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 ZNF705GA8MUZ8 300 aaPredicted RBP6.41□□□□□ -1.38
SMAD3-212ENST00000559937 SNURFLB1AK76 121 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 TSTD3H0UI37 97 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 H3BRN7 92 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 LY6HO94772 140 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 IGKV1-17P01599 117 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 GZMBP10144 247 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 PSG1P11464 419 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 CRISP2P16562 243 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 HOXB4P17483 251 aaPredicted RBP6.41□□□□□ -1.38
SMAD3-212ENST00000559937 IER3P46695 156 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 EFNA4P52798 201 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 RANP62826 216 aaKnown RBP6.41□□□□□ -1.38
SMAD3-212ENST00000559937 FXYD3Q14802 87 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 KLK9Q2XQG4 91 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 CT83Q5H943 113 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 ZNF562Q6V9R5 426 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 TMEM136Q6ZRR5 245 aa6.41□□□□□ -1.38
SMAD3-212ENST00000559937 LYPD1Q8N2G4 141 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms