RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 RPL29P47914 159 aaKnown RBP9.55□□□□□ -0.88
SHMT2-221ENST00000555773 ELLP55199 621 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-221ENST00000555773 TOMM20LQ6UXN7 152 aa9.55□□□□□ -0.88
SHMT2-221ENST00000555773 REC114Q7Z4M0 266 aa9.55□□□□□ -0.88
SHMT2-221ENST00000555773 ZNF709Q8N972 641 aa9.55□□□□□ -0.88
SHMT2-221ENST00000555773 BPIFCQ8NFQ6 507 aa9.55□□□□□ -0.88
SHMT2-221ENST00000555773 DLX4Q92988 240 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-221ENST00000555773 PPP1R14BQ96C90 147 aa9.55□□□□□ -0.88
SHMT2-221ENST00000555773 MGST2Q99735 147 aa9.55□□□□□ -0.88
SHMT2-221ENST00000555773 ARL6Q9H0F7 186 aa9.55□□□□□ -0.88
SHMT2-221ENST00000555773 KCNIP2Q9NS61 270 aa9.55□□□□□ -0.88
SHMT2-221ENST00000555773 UFC1Q9Y3C8 167 aa9.55□□□□□ -0.88
SHMT2-221ENST00000555773 PUS1Q9Y606 427 aaKnown RBP eCLIP9.55□□□□□ -0.88
SHMT2-221ENST00000555773 WNK1Q9H4A3 2382 aa9.55□□□□□ -0.88
SHMT2-221ENST00000555773 IGHV3-35A0A0C4DH35 117 aa9.54□□□□□ -0.88
SHMT2-221ENST00000555773 WI2-2373I1.2A0A1W2PRP0 233 aa9.54□□□□□ -0.88
SHMT2-221ENST00000555773 ZNF320A2RRD8 509 aa9.54□□□□□ -0.88
SHMT2-221ENST00000555773 BCL2L11O43521 198 aa9.54□□□□□ -0.88
SHMT2-221ENST00000555773 SLURP1P55000 103 aa9.54□□□□□ -0.88
SHMT2-221ENST00000555773 SYNJ2BPP57105 145 aa9.54□□□□□ -0.88
SHMT2-221ENST00000555773 EIF5AP63241 154 aaKnown RBP9.54□□□□□ -0.88
SHMT2-221ENST00000555773 PXDC1Q5TGL8 231 aa9.54□□□□□ -0.88
SHMT2-221ENST00000555773 WFDC9Q8NEX5 89 aa9.54□□□□□ -0.88
SHMT2-221ENST00000555773 TMEM190Q8WZ59 177 aa9.54□□□□□ -0.88
SHMT2-221ENST00000555773 GINS3Q9BRX5 216 aa9.54□□□□□ -0.88
SHMT2-221ENST00000555773 NPCDR1Q9BY65 106 aa9.54□□□□□ -0.88
SHMT2-221ENST00000555773 CYTL1Q9NRR1 136 aa9.54□□□□□ -0.88
SHMT2-221ENST00000555773 PEMTQ9UBM1 199 aa9.54□□□□□ -0.88
SHMT2-221ENST00000555773 OVOL1O14753 267 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 S100A7P31151 101 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 PLP1P60201 277 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 PRR20EP86478 221 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 PRR20CP86479 221 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 PRR20DP86480 221 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 PRR20BP86481 221 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 PRR20AP86496 221 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 OPCMLQ14982 345 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 RPL7L1Q6DKI1 246 aaKnown RBP9.53□□□□□ -0.88
SHMT2-221ENST00000555773 Q6ZRG5 221 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 S100A7AQ86SG5 101 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 C9orf62Q8N4C0 152 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 LINC00482Q8N8I6 264 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 OR9G4Q8NGQ1 327 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 GNPNAT1Q96EK6 184 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-221ENST00000555773 ZNF414Q96IQ9 312 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 GGTLC1Q9BX51 225 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 PFDN2Q9UHV9 154 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 TIMM9Q9Y5J7 89 aa9.53□□□□□ -0.88
SHMT2-221ENST00000555773 A8MWP6 167 aa9.52□□□□□ -0.89
SHMT2-221ENST00000555773 IL4P05112 153 aa9.52□□□□□ -0.89
SHMT2-221ENST00000555773 LINC00869P0C866 280 aa9.52□□□□□ -0.89
SHMT2-221ENST00000555773 LAMTOR1Q6IAA8 161 aa9.52□□□□□ -0.89
SHMT2-221ENST00000555773 UNQ9165/PRO28630Q6UXU0 137 aa9.52□□□□□ -0.89
SHMT2-221ENST00000555773 TMEM182Q6ZP80 229 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-221ENST00000555773 MARC2Q969Z3 335 aa9.52□□□□□ -0.89
SHMT2-221ENST00000555773 RNF125Q96EQ8 232 aa9.52□□□□□ -0.89
SHMT2-221ENST00000555773 RCC1LQ96I51 464 aaKnown RBP9.52□□□□□ -0.89
SHMT2-221ENST00000555773 C20orf24Q9BUV8 137 aa9.52□□□□□ -0.89
SHMT2-221ENST00000555773 ELOVL1Q9BW60 279 aa9.52□□□□□ -0.89
SHMT2-221ENST00000555773 ARV1Q9H2C2 271 aa9.52□□□□□ -0.89
SHMT2-221ENST00000555773 ZFAND3Q9H8U3 227 aa9.52□□□□□ -0.89
SHMT2-221ENST00000555773 DAZ1Q9NQZ3 744 aaKnown RBP9.52□□□□□ -0.89
SHMT2-221ENST00000555773 SIGLEC8Q9NYZ4 499 aa9.52□□□□□ -0.89
SHMT2-221ENST00000555773 ELOA3CA0A087WX78 387 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-221ENST00000555773 HYPMO75409 117 aa9.51□□□□□ -0.89
SHMT2-221ENST00000555773 TSPAN15O95858 294 aa9.51□□□□□ -0.89
SHMT2-221ENST00000555773 NPPCP23582 126 aa9.51□□□□□ -0.89
SHMT2-221ENST00000555773 GATA2P23769 480 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-221ENST00000555773 B2MP61769 119 aa9.51□□□□□ -0.89
SHMT2-221ENST00000555773 SERF2P84101 59 aa9.51□□□□□ -0.89
SHMT2-221ENST00000555773 MIC13Q5XKP0 118 aa9.51□□□□□ -0.89
SHMT2-221ENST00000555773 SLC51BQ86UW2 128 aa9.51□□□□□ -0.89
SHMT2-221ENST00000555773 STPG3Q8N7X2 389 aa9.51□□□□□ -0.89
SHMT2-221ENST00000555773 METTL26Q96S19 204 aa9.51□□□□□ -0.89
SHMT2-221ENST00000555773 PSMG3Q9BT73 122 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-221ENST00000555773 ZNF471Q9BX82 626 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-221ENST00000555773 SLC39A9Q9NUM3 307 aa9.51□□□□□ -0.89
SHMT2-221ENST00000555773 MRPL27Q9P0M9 148 aaKnown RBP9.51□□□□□ -0.89
SHMT2-221ENST00000555773 PXMP4Q9Y6I8 212 aa9.51□□□□□ -0.89
SHMT2-221ENST00000555773 A0A1W2PS18 150 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 HNRNPCP07910 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
SHMT2-221ENST00000555773 C8orf88P0DMB2 117 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 ORM2P19652 201 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 CRYBB3P26998 211 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 ATP6V0CP27449 155 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 BMI1P35226 326 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 NKX2-5P52952 324 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-221ENST00000555773 LYZP61626 148 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 USF2Q15853 346 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-221ENST00000555773 TM4SF20Q53R12 229 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 BAP18Q8IXM2 172 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 HSD17B11Q8NBQ5 300 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 OR1L4Q8NGR5 311 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 OR2G3Q8NGZ4 309 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 NARS2Q96I59 477 aaKnown RBP9.5□□□□□ -0.89
SHMT2-221ENST00000555773 RSG1Q9BU20 258 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 MCRIP2Q9BUT9 160 aaKnown RBP9.5□□□□□ -0.89
SHMT2-221ENST00000555773 PBDC1Q9BVG4 233 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 DNAJC4Q9NNZ3 241 aa9.5□□□□□ -0.89
SHMT2-221ENST00000555773 RABAC1Q9UI14 185 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms