RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 USF2Q15853 346 aaPredicted RBP17.38■□□□□ 0.37
NEK9-203ENST00000553945 ACOT7LQ6ZUV0 252 aa17.38■□□□□ 0.37
NEK9-203ENST00000553945 GBGT1Q8N5D6 347 aa17.38■□□□□ 0.37
NEK9-203ENST00000553945 OR51G1Q8NGK1 321 aa17.38■□□□□ 0.37
NEK9-203ENST00000553945 UBQLN2Q9UHD9 624 aa17.38■□□□□ 0.37
NEK9-203ENST00000553945 K7EPK0 472 aa17.37■□□□□ 0.37
NEK9-203ENST00000553945 TSC22D2O75157 780 aa17.37■□□□□ 0.37
NEK9-203ENST00000553945 CD5P06127 495 aa17.37■□□□□ 0.37
NEK9-203ENST00000553945 HNRNPCP07910 306 aaKnown RBP eCLIP17.37■□□□□ 0.37
NEK9-203ENST00000553945 METTL15P1P0C7V9 234 aa17.37■□□□□ 0.37
NEK9-203ENST00000553945 THAP8Q8NA92 274 aa17.37■□□□□ 0.37
NEK9-203ENST00000553945 GRAMD2BQ96HH9 432 aa17.37■□□□□ 0.37
NEK9-203ENST00000553945 IGKV1OR2-108A0A075B7D4 117 aa17.36■□□□□ 0.37
NEK9-203ENST00000553945 C7orf66A4D0T2 115 aa17.36■□□□□ 0.37
NEK9-203ENST00000553945 CCNKO75909 580 aa17.36■□□□□ 0.37
NEK9-203ENST00000553945 P2RY1P47900 373 aa17.36■□□□□ 0.37
NEK9-203ENST00000553945 PAFAH1B2P68402 229 aa17.36■□□□□ 0.37
NEK9-203ENST00000553945 AKR1C1Q04828 323 aa17.36■□□□□ 0.37
NEK9-203ENST00000553945 OR2F1Q13607 317 aa17.36■□□□□ 0.37
NEK9-203ENST00000553945 TMEM14EPQ6UXP3 125 aa17.36■□□□□ 0.37
NEK9-203ENST00000553945 TRGV9Q99603 122 aa17.36■□□□□ 0.37
NEK9-203ENST00000553945 PBDC1Q9BVG4 233 aa17.36■□□□□ 0.37
NEK9-203ENST00000553945 RABAC1Q9UI14 185 aa17.36■□□□□ 0.37
NEK9-203ENST00000553945 U3KQK5 164 aa17.36■□□□□ 0.37
NEK9-203ENST00000553945 SMCO3A2RU48 225 aa17.35■□□□□ 0.37
NEK9-203ENST00000553945 PMS2P5A8MQ11 134 aa17.35■□□□□ 0.37
NEK9-203ENST00000553945 GOSR2O14653 212 aa17.35■□□□□ 0.37
NEK9-203ENST00000553945 S100A10P60903 97 aa17.35■□□□□ 0.37
NEK9-203ENST00000553945 HAGHQ16775 308 aa17.35■□□□□ 0.37
NEK9-203ENST00000553945 WFDC3Q8IUB2 231 aa17.35■□□□□ 0.37
NEK9-203ENST00000553945 RNF125Q96EQ8 232 aa17.35■□□□□ 0.37
NEK9-203ENST00000553945 U3KQE9 123 aa17.35■□□□□ 0.37
NEK9-203ENST00000553945 HUWE1Q7Z6Z7 4374 aaKnown RBP17.35■□□□□ 0.37
NEK9-203ENST00000553945 RBMY1BA6NDE4 496 aaKnown RBP17.34■□□□□ 0.37
NEK9-203ENST00000553945 RBMY1EA6NEQ0 496 aaKnown RBP17.34■□□□□ 0.37
NEK9-203ENST00000553945 DNASE2O00115 360 aaPredicted RBP17.34■□□□□ 0.37
NEK9-203ENST00000553945 RBMY1DP0C7P1 496 aaKnown RBP17.34■□□□□ 0.37
NEK9-203ENST00000553945 RRAS2P62070 204 aaPredicted RBP17.34■□□□□ 0.37
NEK9-203ENST00000553945 OR10P1Q8NGE3 313 aa17.34■□□□□ 0.37
NEK9-203ENST00000553945 MS4A6AQ9H2W1 248 aa17.34■□□□□ 0.37
NEK9-203ENST00000553945 ZMAT4Q9H898 229 aa17.34■□□□□ 0.37
NEK9-203ENST00000553945 SIX6O95475 246 aa17.33■□□□□ 0.36
NEK9-203ENST00000553945 BCAP31P51572 246 aa17.33■□□□□ 0.36
NEK9-203ENST00000553945 LYZP61626 148 aa17.33■□□□□ 0.36
NEK9-203ENST00000553945 ODF3L2Q3SX64 289 aa17.33■□□□□ 0.36
NEK9-203ENST00000553945 LINC00322Q6ZN03 302 aaPredicted RBP17.33■□□□□ 0.36
NEK9-203ENST00000553945 PVALBP20472 110 aaPredicted RBP17.32■□□□□ 0.36
NEK9-203ENST00000553945 RAB32Q13637 225 aa17.32■□□□□ 0.36
NEK9-203ENST00000553945 C16orf54Q6UWD8 224 aa17.32■□□□□ 0.36
NEK9-203ENST00000553945 TMEM144Q7Z5S9 345 aa17.32■□□□□ 0.36
NEK9-203ENST00000553945 TM2D3Q9BRN9 247 aa17.32■□□□□ 0.36
NEK9-203ENST00000553945 MGAT4CQ9UBM8 478 aa17.32■□□□□ 0.36
NEK9-203ENST00000553945 EIF2B2P49770 351 aaKnown RBP17.31■□□□□ 0.36
NEK9-203ENST00000553945 CAV2P51636 162 aa17.31■□□□□ 0.36
NEK9-203ENST00000553945 DLK1P80370 383 aa17.31■□□□□ 0.36
NEK9-203ENST00000553945 IL15RAQ13261 267 aa17.31■□□□□ 0.36
NEK9-203ENST00000553945 STXBP6Q8NFX7 210 aa17.31■□□□□ 0.36
NEK9-203ENST00000553945 CITED4Q96RK1 184 aa17.31■□□□□ 0.36
NEK9-203ENST00000553945 SSNA1O43805 119 aa17.3■□□□□ 0.36
NEK9-203ENST00000553945 CMC4P56277 68 aaPredicted RBP17.3■□□□□ 0.36
NEK9-203ENST00000553945 ARL16Q0P5N6 197 aa17.3■□□□□ 0.36
NEK9-203ENST00000553945 GLMPQ8WWB7 406 aa17.3■□□□□ 0.36
NEK9-203ENST00000553945 RCHY1Q96PM5 261 aa17.3■□□□□ 0.36
NEK9-203ENST00000553945 FAM110AQ9BQ89 295 aa17.3■□□□□ 0.36
NEK9-203ENST00000553945 C11orf1Q9H5F2 150 aa17.3■□□□□ 0.36
NEK9-203ENST00000553945 PFDN2Q9UHV9 154 aa17.3■□□□□ 0.36
NEK9-203ENST00000553945 HELTA6NFD8 242 aa17.29■□□□□ 0.36
NEK9-203ENST00000553945 FAM24AA6NFZ4 105 aa17.29■□□□□ 0.36
NEK9-203ENST00000553945 BUB3O43684 328 aa17.29■□□□□ 0.36
NEK9-203ENST00000553945 PTTG1O95997 202 aa17.29■□□□□ 0.36
NEK9-203ENST00000553945 CFDP00746 253 aaPredicted RBP17.29■□□□□ 0.36
NEK9-203ENST00000553945 APRG1Q8IVJ8 170 aa17.29■□□□□ 0.36
NEK9-203ENST00000553945 BPIFCQ8NFQ6 507 aa17.29■□□□□ 0.36
NEK9-203ENST00000553945 NPVFQ9HCQ7 196 aa17.29■□□□□ 0.36
NEK9-203ENST00000553945 LOC102724200A0A096LPH7 203 aaPredicted RBP17.28■□□□□ 0.36
NEK9-203ENST00000553945 TRAV2A0A0B4J234 112 aa17.28■□□□□ 0.36
NEK9-203ENST00000553945 FNDC10F2Z333 226 aa17.28■□□□□ 0.36
NEK9-203ENST00000553945 GATA2P23769 480 aaPredicted RBP17.28■□□□□ 0.36
NEK9-203ENST00000553945 NUP62P37198 522 aaPredicted RBP17.28■□□□□ 0.36
NEK9-203ENST00000553945 PPP1R14BQ96C90 147 aa17.28■□□□□ 0.36
NEK9-203ENST00000553945 SPATA25Q9BR10 227 aa17.28■□□□□ 0.36
NEK9-203ENST00000553945 GGTLC1Q9BX51 225 aa17.28■□□□□ 0.36
NEK9-203ENST00000553945 MAP6D1Q9H9H5 199 aa17.28■□□□□ 0.36
NEK9-203ENST00000553945 CST7O76096 145 aa17.27■□□□□ 0.36
NEK9-203ENST00000553945 TMEM182Q6ZP80 229 aaPredicted RBP17.27■□□□□ 0.36
NEK9-203ENST00000553945 CYP2G1PQ6ZSU1 146 aa17.27■□□□□ 0.36
NEK9-203ENST00000553945 FAM24BQ8N5W8 94 aa17.27■□□□□ 0.36
NEK9-203ENST00000553945 GGACTQ9BVM4 153 aa17.27■□□□□ 0.36
NEK9-203ENST00000553945 NMES1Q9C002 83 aa17.27■□□□□ 0.36
NEK9-203ENST00000553945 NBEAL2Q6ZNJ1 2754 aa17.26■□□□□ 0.35
NEK9-203ENST00000553945 DEDDO75618 318 aa17.26■□□□□ 0.35
NEK9-203ENST00000553945 AP2S1P53680 142 aaPredicted RBP17.26■□□□□ 0.35
NEK9-203ENST00000553945 SLC38A11Q08AI6 406 aa17.26■□□□□ 0.35
NEK9-203ENST00000553945 ZNF124Q15973 351 aa17.26■□□□□ 0.35
NEK9-203ENST00000553945 LYRM2Q9NU23 88 aaPredicted RBP17.26■□□□□ 0.35
NEK9-203ENST00000553945 K7EQG2 157 aa17.25■□□□□ 0.35
NEK9-203ENST00000553945 ORM2P19652 201 aa17.25■□□□□ 0.35
NEK9-203ENST00000553945 CYCSP99999 105 aaKnown RBP17.25■□□□□ 0.35
NEK9-203ENST00000553945 LRRC37A5PQ49AS3 106 aa17.25■□□□□ 0.35
NEK9-203ENST00000553945 TEPPQ6URK8 271 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms