RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 FAM209BQ5JX69 171 aa9.1□□□□□ -0.95
NEK9-202ENST00000553823 DPPA3Q6W0C5 159 aa9.1□□□□□ -0.95
NEK9-202ENST00000553823 OR10G4Q8NGN3 311 aa9.1□□□□□ -0.95
NEK9-202ENST00000553823 OR10G9Q8NGN4 311 aa9.1□□□□□ -0.95
NEK9-202ENST00000553823 OR10G7Q8NGN6 311 aa9.1□□□□□ -0.95
NEK9-202ENST00000553823 FAM213BQ8TBF2 198 aa9.1□□□□□ -0.95
NEK9-202ENST00000553823 CHRDL1Q9BU40 450 aa9.1□□□□□ -0.95
NEK9-202ENST00000553823 RNF114Q9Y508 228 aa9.1□□□□□ -0.95
NEK9-202ENST00000553823 CLPSL1A2RUU4 121 aa9.09□□□□□ -0.95
NEK9-202ENST00000553823 NMBP08949 121 aa9.09□□□□□ -0.95
NEK9-202ENST00000553823 FHITP49789 147 aa9.09□□□□□ -0.95
NEK9-202ENST00000553823 BLOC1S1P78537 153 aa9.09□□□□□ -0.95
NEK9-202ENST00000553823 GCSAMLQ5JQS6 135 aa9.09□□□□□ -0.95
NEK9-202ENST00000553823 CLLU1Q5K131 121 aa9.09□□□□□ -0.95
NEK9-202ENST00000553823 PXDC1Q5TGL8 231 aa9.09□□□□□ -0.95
NEK9-202ENST00000553823 OR51G1Q8NGK1 321 aa9.09□□□□□ -0.95
NEK9-202ENST00000553823 Q8WTZ3 238 aa9.09□□□□□ -0.95
NEK9-202ENST00000553823 PCNPQ8WW12 178 aaKnown RBP9.09□□□□□ -0.95
NEK9-202ENST00000553823 SAT2Q96F10 170 aaPredicted RBP9.09□□□□□ -0.95
NEK9-202ENST00000553823 UBE2E2Q96LR5 201 aa9.09□□□□□ -0.95
NEK9-202ENST00000553823 GNB4Q9HAV0 340 aa9.09□□□□□ -0.95
NEK9-202ENST00000553823 WNK1Q9H4A3 2382 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 ANKRD34BA5PLL1 514 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 PPP5D1E7EU14 171 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 COX7A2P2O60397 106 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 TRBV12-3P01733 135 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 ARL3P36405 182 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 PLP1P60201 277 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 LYZP61626 148 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 RELQ04864 619 aaPredicted RBP9.08□□□□□ -0.96
NEK9-202ENST00000553823 TCTEX1D4Q5JR98 221 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 FAM122CQ6P4D5 195 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 ZNF600Q6ZNG1 722 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 RPP25LQ8N5L8 163 aaKnown RBP9.08□□□□□ -0.96
NEK9-202ENST00000553823 OR1L4Q8NGR5 311 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 GATAD1Q8WUU5 269 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 RCC1LQ96I51 464 aaKnown RBP9.08□□□□□ -0.96
NEK9-202ENST00000553823 PFDN5Q99471 154 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 C19orf24Q9BVV8 132 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 ACTR3CQ9C0K3 210 aaPredicted RBP9.08□□□□□ -0.96
NEK9-202ENST00000553823 DNAJC4Q9NNZ3 241 aa9.08□□□□□ -0.96
NEK9-202ENST00000553823 PEF1Q9UBV8 284 aaKnown RBP9.08□□□□□ -0.96
NEK9-202ENST00000553823 ELOA3CA0A087WX78 387 aaPredicted RBP9.07□□□□□ -0.96
NEK9-202ENST00000553823 CTXND1A0A1B0GTU2 59 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 A0A1B0GUS0 222 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 A0A1W2PPV4 95 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 SEC14L6B5MCN3 397 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 HYPMO75409 117 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 OR2C1O95371 312 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 IL4P05112 153 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 LGALS1P09382 135 aaKnown RBP9.07□□□□□ -0.96
NEK9-202ENST00000553823 OR5G3P0C626 314 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 ORM2P19652 201 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 CDX1P47902 265 aaPredicted RBP9.07□□□□□ -0.96
NEK9-202ENST00000553823 CDC34P49427 236 aaPredicted RBP9.07□□□□□ -0.96
NEK9-202ENST00000553823 PROK1P58294 105 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 RHOBP62745 196 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 OR1B1Q8NGR6 318 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 WFDC12Q8WWY7 111 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 OR5B12Q96R08 314 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 RNF2Q99496 336 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 SLC25A22Q9H936 323 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 DOK5Q9P104 306 aa9.07□□□□□ -0.96
NEK9-202ENST00000553823 PUS1Q9Y606 427 aaKnown RBP eCLIP9.07□□□□□ -0.96
NEK9-202ENST00000553823 ATRQ13535 2644 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 IGHV3-35A0A0C4DH35 117 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 WI2-2373I1.2A0A1W2PRP0 233 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 BMPR1BO00238 502 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 GGCTO75223 188 aaKnown RBP9.06□□□□□ -0.96
NEK9-202ENST00000553823 H2AFB1P0C5Y9 115 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 ZNF726P1Q15940 193 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 KHDC1LQ5JSQ8 128 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 FAM78BQ5VT40 261 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 C10orf113Q5VZT2 155 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 TOMM20LQ6UXN7 152 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 PATE2Q6UY27 113 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 MBD3L1Q8WWY6 194 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 TMEM37Q8WXS4 190 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 RAB24Q969Q5 203 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 RNF125Q96EQ8 232 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 ZNF414Q96IQ9 312 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 PBDC1Q9BVG4 233 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 MRPL32Q9BYC8 188 aaKnown RBP9.06□□□□□ -0.96
NEK9-202ENST00000553823 HIGD1AQ9Y241 93 aa9.06□□□□□ -0.96
NEK9-202ENST00000553823 MAP1LC3B2A6NCE7 125 aa9.05□□□□□ -0.96
NEK9-202ENST00000553823 HBE1P02100 147 aa9.05□□□□□ -0.96
NEK9-202ENST00000553823 CD28P10747 220 aa9.05□□□□□ -0.96
NEK9-202ENST00000553823 SPATA31B1PQ5VZV4 182 aa9.05□□□□□ -0.96
NEK9-202ENST00000553823 LCN15Q6UWW0 184 aa9.05□□□□□ -0.96
NEK9-202ENST00000553823 SSX7Q7RTT5 188 aa9.05□□□□□ -0.96
NEK9-202ENST00000553823 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.05□□□□□ -0.96
NEK9-202ENST00000553823 SFT2D1Q8WV19 159 aa9.05□□□□□ -0.96
NEK9-202ENST00000553823 C4orf3Q8WVX3 66 aa9.05□□□□□ -0.96
NEK9-202ENST00000553823 MAP1LC3BQ9GZQ8 125 aa9.05□□□□□ -0.96
NEK9-202ENST00000553823 HRH4Q9H3N8 390 aa9.05□□□□□ -0.96
NEK9-202ENST00000553823 SEPSECSQ9HD40 501 aaKnown RBP9.05□□□□□ -0.96
NEK9-202ENST00000553823 MRPL27Q9P0M9 148 aaKnown RBP9.05□□□□□ -0.96
NEK9-202ENST00000553823 FUT9Q9Y231 359 aa9.05□□□□□ -0.96
NEK9-202ENST00000553823 TRAV1-1A0A0B4J248 108 aa9.04□□□□□ -0.96
NEK9-202ENST00000553823 TEX46H3BTG2 121 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms