RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 OR51G1Q8NGK1 321 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 OR5H2Q8NGV7 314 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 OR6F1Q8NGZ6 308 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 IGF2BP2-AS1Q96M15 143 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 PGPEP1Q9NXJ5 209 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 KLK11Q9UBX7 282 aa8.91□□□□□ -0.98
VPS29-211ENST00000553128 A0A0A6YYH2 397 aa8.9□□□□□ -0.98
VPS29-211ENST00000553128 A0A0G2JRQ6 117 aa8.9□□□□□ -0.98
VPS29-211ENST00000553128 A6NJ64 397 aa8.9□□□□□ -0.98
VPS29-211ENST00000553128 CRXO43186 299 aaPredicted RBP8.9□□□□□ -0.98
VPS29-211ENST00000553128 NAT1P18440 290 aa8.9□□□□□ -0.98
VPS29-211ENST00000553128 HRH1P35367 487 aa8.9□□□□□ -0.98
VPS29-211ENST00000553128 HSPA13P48723 471 aa8.9□□□□□ -0.98
VPS29-211ENST00000553128 PSMB3P49720 205 aa8.9□□□□□ -0.98
VPS29-211ENST00000553128 IDNKQ5T6J7 187 aa8.9□□□□□ -0.98
VPS29-211ENST00000553128 COQ8AQ8NI60 647 aa8.9□□□□□ -0.98
VPS29-211ENST00000553128 TMEM170AQ8WVE7 144 aa8.9□□□□□ -0.98
VPS29-211ENST00000553128 DIABLOQ9NR28 239 aa8.9□□□□□ -0.98
VPS29-211ENST00000553128 FAT3Q8TDW7 4589 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 A0A1W2PPQ1 181 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 CBY3A6NI87 242 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 M0R2Z0 102 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 EBAG9O00559 213 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 GSTZ1O43708 216 aaPredicted RBP8.89□□□□□ -0.99
VPS29-211ENST00000553128 TOMM40O96008 361 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 PSG1P11464 419 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 HLA-DMAP28067 261 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 ID1P41134 155 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 TAS2R46P59540 309 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 ICAM4Q14773 271 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 TMEM69Q5SWH9 247 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 EBLN2Q6P2I7 272 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 OR4C16Q8NGL9 310 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 NPIPB3Q92617 1050 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 UPK3BQ9BT76 320 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 PTTG2Q9NZH5 202 aa8.89□□□□□ -0.99
VPS29-211ENST00000553128 A8MTW9 85 aa8.88□□□□□ -0.99
VPS29-211ENST00000553128 DNAH10OSP0CZ25 163 aa8.88□□□□□ -0.99
VPS29-211ENST00000553128 RD3LP0DJH9 198 aa8.88□□□□□ -0.99
VPS29-211ENST00000553128 SPINK13Q1W4C9 94 aa8.88□□□□□ -0.99
VPS29-211ENST00000553128 DMRTA1Q5VZB9 504 aa8.88□□□□□ -0.99
VPS29-211ENST00000553128 SPATA31B1PQ5VZV4 182 aa8.88□□□□□ -0.99
VPS29-211ENST00000553128 Q6ZSN1 163 aa8.88□□□□□ -0.99
VPS29-211ENST00000553128 BAP18Q8IXM2 172 aa8.88□□□□□ -0.99
VPS29-211ENST00000553128 FCGR1BQ92637 280 aa8.88□□□□□ -0.99
VPS29-211ENST00000553128 ACY3Q96HD9 319 aa8.88□□□□□ -0.99
VPS29-211ENST00000553128 TP53RKQ96S44 253 aa8.88□□□□□ -0.99
VPS29-211ENST00000553128 PBDC1Q9BVG4 233 aa8.88□□□□□ -0.99
VPS29-211ENST00000553128 ENY2Q9NPA8 101 aa8.88□□□□□ -0.99
VPS29-211ENST00000553128 TNFRSF18Q9Y5U5 241 aa8.88□□□□□ -0.99
VPS29-211ENST00000553128 TRAV26-1A0A087WT03 109 aa8.87□□□□□ -0.99
VPS29-211ENST00000553128 A0A0J9YY99 117 aa8.87□□□□□ -0.99
VPS29-211ENST00000553128 PI3P19957 117 aa8.87□□□□□ -0.99
VPS29-211ENST00000553128 AKR1C2P52895 323 aa8.87□□□□□ -0.99
VPS29-211ENST00000553128 SCAND1P57086 179 aa8.87□□□□□ -0.99
VPS29-211ENST00000553128 RNF125Q96EQ8 232 aa8.87□□□□□ -0.99
VPS29-211ENST00000553128 ABHD1Q96SE0 405 aa8.87□□□□□ -0.99
VPS29-211ENST00000553128 PDCD10Q9BUL8 212 aa8.87□□□□□ -0.99
VPS29-211ENST00000553128 VCXQ9H320 206 aa8.87□□□□□ -0.99
VPS29-211ENST00000553128 DOK5Q9P104 306 aa8.87□□□□□ -0.99
VPS29-211ENST00000553128 MRPS16Q9Y3D3 137 aaKnown RBP8.87□□□□□ -0.99
VPS29-211ENST00000553128 TRAV12-2A0A075B6T6 113 aa8.86□□□□□ -0.99
VPS29-211ENST00000553128 FAM229AH3BQW9 127 aa8.86□□□□□ -0.99
VPS29-211ENST00000553128 SLC25A4P12235 298 aa8.86□□□□□ -0.99
VPS29-211ENST00000553128 S100GP29377 79 aa8.86□□□□□ -0.99
VPS29-211ENST00000553128 TSPOP30536 169 aa8.86□□□□□ -0.99
VPS29-211ENST00000553128 TSPAN5P62079 268 aa8.86□□□□□ -0.99
VPS29-211ENST00000553128 OR5I1Q13606 314 aa8.86□□□□□ -0.99
VPS29-211ENST00000553128 CDPF1Q6NVV7 123 aa8.86□□□□□ -0.99
VPS29-211ENST00000553128 LPCAT3Q6P1A2 487 aa8.86□□□□□ -0.99
VPS29-211ENST00000553128 OR11H7Q8NGC8 314 aa8.86□□□□□ -0.99
VPS29-211ENST00000553128 NRG4Q8WWG1 115 aa8.86□□□□□ -0.99
VPS29-211ENST00000553128 GNPNAT1Q96EK6 184 aaPredicted RBP8.86□□□□□ -0.99
VPS29-211ENST00000553128 ISLRO14498 428 aa8.85□□□□□ -0.99
VPS29-211ENST00000553128 INSP01308 110 aa8.85□□□□□ -0.99
VPS29-211ENST00000553128 HOXA5P20719 270 aa8.85□□□□□ -0.99
VPS29-211ENST00000553128 PSMB9P28065 219 aa8.85□□□□□ -0.99
VPS29-211ENST00000553128 HTR2BP41595 481 aa8.85□□□□□ -0.99
VPS29-211ENST00000553128 UCP3P55916 312 aa8.85□□□□□ -0.99
VPS29-211ENST00000553128 SP6Q3SY56 376 aa8.85□□□□□ -0.99
VPS29-211ENST00000553128 C2orf83Q53S99 150 aa8.85□□□□□ -0.99
VPS29-211ENST00000553128 RXFP4Q8TDU9 374 aa8.85□□□□□ -0.99
VPS29-211ENST00000553128 ZNF503Q96F45 646 aa8.85□□□□□ -0.99
VPS29-211ENST00000553128 RPRMQ9NS64 109 aa8.85□□□□□ -0.99
VPS29-211ENST00000553128 SSR3Q9UNL2 185 aa8.85□□□□□ -0.99
VPS29-211ENST00000553128 IFNA5P01569 189 aa8.84□□□□□ -0.99
VPS29-211ENST00000553128 CNN1P51911 297 aaKnown RBP8.84□□□□□ -0.99
VPS29-211ENST00000553128 ERVFC1-1P60608 527 aa8.84□□□□□ -0.99
VPS29-211ENST00000553128 SPCS3P61009 180 aa8.84□□□□□ -0.99
VPS29-211ENST00000553128 ZNF90Q03938 601 aa8.84□□□□□ -0.99
VPS29-211ENST00000553128 IGFL4Q6B9Z1 124 aa8.84□□□□□ -0.99
VPS29-211ENST00000553128 RNASEH2CQ8TDP1 164 aaKnown RBP8.84□□□□□ -0.99
VPS29-211ENST00000553128 NOP10Q9NPE3 64 aaKnown RBP8.84□□□□□ -0.99
VPS29-211ENST00000553128 HEYLQ9NQ87 328 aaPredicted RBP8.84□□□□□ -0.99
VPS29-211ENST00000553128 IGKV1D-37A0A075B6S9 117 aa8.83□□□□□ -1
VPS29-211ENST00000553128 A0A087WTM6 91 aa8.83□□□□□ -1
VPS29-211ENST00000553128 KRTAP29-1A8MX34 341 aaPredicted RBP8.83□□□□□ -1
VPS29-211ENST00000553128 ZNF701M0R085 212 aaPredicted RBP8.83□□□□□ -1
VPS29-211ENST00000553128 EREGO14944 169 aa8.83□□□□□ -1
VPS29-211ENST00000553128 PRB4P10163 310 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms