RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 U3KQK5 164 aa19.41■□□□□ 0.7
CPSF6-205ENST00000550075 IGHV3-66A0A0C4DH42 116 aa19.4■□□□□ 0.7
CPSF6-205ENST00000550075 APOHP02749 345 aaPredicted RBP19.4■□□□□ 0.7
CPSF6-205ENST00000550075 FAM90A2PQ658T7 463 aa19.4■□□□□ 0.7
CPSF6-205ENST00000550075 OR8G2PQ6IF36 304 aa19.4■□□□□ 0.7
CPSF6-205ENST00000550075 THAP8Q8NA92 274 aa19.4■□□□□ 0.7
CPSF6-205ENST00000550075 RABAC1Q9UI14 185 aa19.4■□□□□ 0.7
CPSF6-205ENST00000550075 LSM5Q9Y4Y9 91 aaKnown RBP19.4■□□□□ 0.7
CPSF6-205ENST00000550075 IGKV3-7A0A075B6H7 116 aa19.39■□□□□ 0.69
CPSF6-205ENST00000550075 PVALBP20472 110 aaPredicted RBP19.39■□□□□ 0.69
CPSF6-205ENST00000550075 P2RY1P47900 373 aa19.39■□□□□ 0.69
CPSF6-205ENST00000550075 CMC4P56277 68 aaPredicted RBP19.39■□□□□ 0.69
CPSF6-205ENST00000550075 RPL11P62913 178 aaKnown RBP19.39■□□□□ 0.69
CPSF6-205ENST00000550075 TMEM14EPQ6UXP3 125 aa19.39■□□□□ 0.69
CPSF6-205ENST00000550075 RNF125Q96EQ8 232 aa19.39■□□□□ 0.69
CPSF6-205ENST00000550075 FAM110AQ9BQ89 295 aa19.39■□□□□ 0.69
CPSF6-205ENST00000550075 IGKV1D-37A0A075B6S9 117 aa19.38■□□□□ 0.69
CPSF6-205ENST00000550075 SMCO3A2RU48 225 aa19.38■□□□□ 0.69
CPSF6-205ENST00000550075 DFFBO76075 338 aa19.38■□□□□ 0.69
CPSF6-205ENST00000550075 CFDP00746 253 aaPredicted RBP19.38■□□□□ 0.69
CPSF6-205ENST00000550075 PAX9P55771 341 aa19.38■□□□□ 0.69
CPSF6-205ENST00000550075 USF2Q15853 346 aaPredicted RBP19.38■□□□□ 0.69
CPSF6-205ENST00000550075 PBDC1Q9BVG4 233 aa19.38■□□□□ 0.69
CPSF6-205ENST00000550075 TRAV2A0A0B4J234 112 aa19.37■□□□□ 0.69
CPSF6-205ENST00000550075 K7EPK0 472 aa19.37■□□□□ 0.69
CPSF6-205ENST00000550075 DNASE2O00115 360 aaPredicted RBP19.37■□□□□ 0.69
CPSF6-205ENST00000550075 METTL15P1P0C7V9 234 aa19.37■□□□□ 0.69
CPSF6-205ENST00000550075 TFPI2P48307 235 aa19.37■□□□□ 0.69
CPSF6-205ENST00000550075 DLK1P80370 383 aa19.37■□□□□ 0.69
CPSF6-205ENST00000550075 ZNF90Q03938 601 aa19.37■□□□□ 0.69
CPSF6-205ENST00000550075 OR10P1Q8NGE3 313 aa19.37■□□□□ 0.69
CPSF6-205ENST00000550075 MGAT4CQ9UBM8 478 aa19.37■□□□□ 0.69
CPSF6-205ENST00000550075 C7orf66A4D0T2 115 aa19.36■□□□□ 0.69
CPSF6-205ENST00000550075 HELTA6NFD8 242 aa19.36■□□□□ 0.69
CPSF6-205ENST00000550075 S100A10P60903 97 aa19.36■□□□□ 0.69
CPSF6-205ENST00000550075 HAGHQ16775 308 aa19.36■□□□□ 0.69
CPSF6-205ENST00000550075 TM2D3Q9BRN9 247 aa19.36■□□□□ 0.69
CPSF6-205ENST00000550075 UBQLN2Q9UHD9 624 aa19.36■□□□□ 0.69
CPSF6-205ENST00000550075 U3KQE9 123 aa19.36■□□□□ 0.69
CPSF6-205ENST00000550075 FNDC10F2Z333 226 aa19.35■□□□□ 0.69
CPSF6-205ENST00000550075 LYZP61626 148 aa19.35■□□□□ 0.69
CPSF6-205ENST00000550075 ODF3L2Q3SX64 289 aa19.35■□□□□ 0.69
CPSF6-205ENST00000550075 TMEM144Q7Z5S9 345 aa19.35■□□□□ 0.69
CPSF6-205ENST00000550075 GBGT1Q8N5D6 347 aa19.35■□□□□ 0.69
CPSF6-205ENST00000550075 SPATA25Q9BR10 227 aa19.35■□□□□ 0.69
CPSF6-205ENST00000550075 IGKV1OR2-108A0A075B7D4 117 aa19.34■□□□□ 0.69
CPSF6-205ENST00000550075 GOSR2O14653 212 aa19.34■□□□□ 0.69
CPSF6-205ENST00000550075 BCAP31P51572 246 aa19.34■□□□□ 0.69
CPSF6-205ENST00000550075 AP2S1P53680 142 aaPredicted RBP19.34■□□□□ 0.69
CPSF6-205ENST00000550075 OR2F1Q13607 317 aa19.34■□□□□ 0.69
CPSF6-205ENST00000550075 LINC00322Q6ZN03 302 aaPredicted RBP19.34■□□□□ 0.69
CPSF6-205ENST00000550075 LILRB2Q8N423 598 aa19.34■□□□□ 0.69
CPSF6-205ENST00000550075 BPIFCQ8NFQ6 507 aa19.34■□□□□ 0.69
CPSF6-205ENST00000550075 MS4A6AQ9H2W1 248 aa19.34■□□□□ 0.69
CPSF6-205ENST00000550075 PMS2P5A8MQ11 134 aa19.33■□□□□ 0.68
CPSF6-205ENST00000550075 PTTG1O95997 202 aa19.33■□□□□ 0.68
CPSF6-205ENST00000550075 CAV2P51636 162 aa19.33■□□□□ 0.68
CPSF6-205ENST00000550075 C16orf54Q6UWD8 224 aa19.33■□□□□ 0.68
CPSF6-205ENST00000550075 STXBP6Q8NFX7 210 aa19.33■□□□□ 0.68
CPSF6-205ENST00000550075 RCHY1Q96PM5 261 aa19.33■□□□□ 0.68
CPSF6-205ENST00000550075 GGTLC1Q9BX51 225 aa19.33■□□□□ 0.68
CPSF6-205ENST00000550075 RBMY1BA6NDE4 496 aaKnown RBP19.32■□□□□ 0.68
CPSF6-205ENST00000550075 RBMY1EA6NEQ0 496 aaKnown RBP19.32■□□□□ 0.68
CPSF6-205ENST00000550075 SSNA1O43805 119 aa19.32■□□□□ 0.68
CPSF6-205ENST00000550075 CCNKO75909 580 aa19.32■□□□□ 0.68
CPSF6-205ENST00000550075 RBMY1DP0C7P1 496 aaKnown RBP19.32■□□□□ 0.68
CPSF6-205ENST00000550075 RRAS2P62070 204 aaPredicted RBP19.32■□□□□ 0.68
CPSF6-205ENST00000550075 RAB32Q13637 225 aa19.32■□□□□ 0.68
CPSF6-205ENST00000550075 WFDC3Q8IUB2 231 aa19.32■□□□□ 0.68
CPSF6-205ENST00000550075 GLMPQ8WWB7 406 aa19.32■□□□□ 0.68
CPSF6-205ENST00000550075 GGACTQ9BVM4 153 aa19.32■□□□□ 0.68
CPSF6-205ENST00000550075 LOC102724200A0A096LPH7 203 aaPredicted RBP19.31■□□□□ 0.68
CPSF6-205ENST00000550075 S100A7P31151 101 aa19.31■□□□□ 0.68
CPSF6-205ENST00000550075 CYCSP99999 105 aaKnown RBP19.31■□□□□ 0.68
CPSF6-205ENST00000550075 PPP1R14BQ96C90 147 aa19.31■□□□□ 0.68
CPSF6-205ENST00000550075 NPVFQ9HCQ7 196 aa19.31■□□□□ 0.68
CPSF6-205ENST00000550075 STAB2Q8WWQ8 2551 aa19.3■□□□□ 0.68
CPSF6-205ENST00000550075 BUB3O43684 328 aa19.3■□□□□ 0.68
CPSF6-205ENST00000550075 IL15RAQ13261 267 aa19.3■□□□□ 0.68
CPSF6-205ENST00000550075 MAP6D1Q9H9H5 199 aa19.3■□□□□ 0.68
CPSF6-205ENST00000550075 FBXL17Q9UF56 701 aa19.3■□□□□ 0.68
CPSF6-205ENST00000550075 SELENOTP62341 195 aa19.29■□□□□ 0.68
CPSF6-205ENST00000550075 SIGLEC15Q6ZMC9 328 aa19.29■□□□□ 0.68
CPSF6-205ENST00000550075 WWC2-AS2Q96NR7 200 aa19.29■□□□□ 0.68
CPSF6-205ENST00000550075 NMES1Q9C002 83 aa19.29■□□□□ 0.68
CPSF6-205ENST00000550075 LYRM2Q9NU23 88 aaPredicted RBP19.29■□□□□ 0.68
CPSF6-205ENST00000550075 SLC45A2Q9UMX9 530 aa19.29■□□□□ 0.68
CPSF6-205ENST00000550075 DEDDO75618 318 aa19.28■□□□□ 0.68
CPSF6-205ENST00000550075 RLN2P04090 185 aa19.28■□□□□ 0.68
CPSF6-205ENST00000550075 APOC4P55056 127 aa19.28■□□□□ 0.68
CPSF6-205ENST00000550075 SLC38A11Q08AI6 406 aa19.28■□□□□ 0.68
CPSF6-205ENST00000550075 TEPPQ6URK8 271 aa19.28■□□□□ 0.68
CPSF6-205ENST00000550075 CYP2G1PQ6ZSU1 146 aa19.28■□□□□ 0.68
CPSF6-205ENST00000550075 STX12Q86Y82 276 aa19.28■□□□□ 0.68
CPSF6-205ENST00000550075 CITED4Q96RK1 184 aa19.28■□□□□ 0.68
CPSF6-205ENST00000550075 C11orf1Q9H5F2 150 aa19.28■□□□□ 0.68
CPSF6-205ENST00000550075 SIX6O95475 246 aa19.27■□□□□ 0.68
CPSF6-205ENST00000550075 C1orf194Q5T5A4 169 aa19.27■□□□□ 0.68
CPSF6-205ENST00000550075 K7EQG2 157 aa19.26■□□□□ 0.67
CPSF6-205ENST00000550075 HBG1P69891 147 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms