RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 MEGF9Q9H1U4 602 aa15.05■□□□□ -0
BRF1-215ENST00000549655 THYN1Q9P016 225 aa15.05■□□□□ -0
BRF1-215ENST00000549655 HIGD1AQ9Y241 93 aa15.05■□□□□ -0
BRF1-215ENST00000549655 FBN2P35556 2912 aa15.04■□□□□ -0
BRF1-215ENST00000549655 H7BYZ3 331 aa15.04■□□□□ -0
BRF1-215ENST00000549655 ATP6V0E1O15342 81 aa15.04■□□□□ -0
BRF1-215ENST00000549655 RPL35P42766 123 aaKnown RBP15.04■□□□□ -0
BRF1-215ENST00000549655 MFAP4P55083 255 aa15.04■□□□□ -0
BRF1-215ENST00000549655 RAB5BP61020 215 aa15.04■□□□□ -0
BRF1-215ENST00000549655 TMEM219Q86XT9 240 aa15.04■□□□□ -0
BRF1-215ENST00000549655 C5orf56Q8N8D9 126 aa15.04■□□□□ -0
BRF1-215ENST00000549655 PIFOQ8TCI5 191 aa15.04■□□□□ -0
BRF1-215ENST00000549655 ANAPC16Q96DE5 110 aa15.04■□□□□ -0
BRF1-215ENST00000549655 TMUB1Q9BVT8 246 aa15.04■□□□□ -0
BRF1-215ENST00000549655 CELSR2Q9HCU4 2923 aa15.04■□□□□ -0
BRF1-215ENST00000549655 MAP1AP78559 2803 aaPredicted RBP15.04■□□□□ -0
BRF1-215ENST00000549655 SH2D7A6NKC9 451 aaPredicted RBP15.04■□□□□ -0
BRF1-215ENST00000549655 GNG7O60262 68 aa15.04■□□□□ -0
BRF1-215ENST00000549655 ANKRD17O75179 2603 aaKnown RBP15.04■□□□□ -0
BRF1-215ENST00000549655 NDUFB8O95169 186 aa15.04■□□□□ -0
BRF1-215ENST00000549655 KRTAP10-9P60411 292 aa15.04■□□□□ -0
BRF1-215ENST00000549655 UNQ5815/PRO19632Q6UWF5 114 aa15.04■□□□□ -0
BRF1-215ENST00000549655 C2CD4CQ8TF44 421 aa15.04■□□□□ -0
BRF1-215ENST00000549655 OR2J3O76001 311 aa15.03■□□□□ -0
BRF1-215ENST00000549655 RPS10P46783 165 aaKnown RBP15.03■□□□□ -0
BRF1-215ENST00000549655 ECSCRQ19T08 205 aa15.03■□□□□ -0
BRF1-215ENST00000549655 LEMD1Q68G75 181 aa15.03■□□□□ -0
BRF1-215ENST00000549655 OCC1Q8TAD7 63 aa15.03■□□□□ -0
BRF1-215ENST00000549655 TRAV30A0A087WSZ9 112 aa15.02■□□□□ -0
BRF1-215ENST00000549655 TRAV20A0A0B4J274 112 aa15.02■□□□□ -0
BRF1-215ENST00000549655 TOMM40O96008 361 aa15.02■□□□□ -0
BRF1-215ENST00000549655 SNRPCP09234 159 aaKnown RBP15.02■□□□□ -0
BRF1-215ENST00000549655 NECAP1Q8NC96 275 aa15.02■□□□□ -0
BRF1-215ENST00000549655 ZNF48Q96MX3 618 aaPredicted RBP15.02■□□□□ -0
BRF1-215ENST00000549655 ELOVL1Q9BW60 279 aa15.02■□□□□ -0
BRF1-215ENST00000549655 C21orf62Q9NYP8 219 aa15.02■□□□□ -0
BRF1-215ENST00000549655 MOB4Q9Y3A3 225 aa15.02■□□□□ -0
BRF1-215ENST00000549655 SOX21Q9Y651 276 aaPredicted RBP15.02■□□□□ -0
BRF1-215ENST00000549655 A0A096LNT2 108 aa15.02□□□□□ -0.01
BRF1-215ENST00000549655 HELTA6NFD8 242 aa15.02□□□□□ -0.01
BRF1-215ENST00000549655 LINC01548A6NM66 108 aa15.02□□□□□ -0.01
BRF1-215ENST00000549655 C9JCJ5 164 aa15.02□□□□□ -0.01
BRF1-215ENST00000549655 F8W735 103 aaPredicted RBP15.02□□□□□ -0.01
BRF1-215ENST00000549655 Q56UQ5 140 aa15.02□□□□□ -0.01
BRF1-215ENST00000549655 FAM110DQ8TAY7 271 aaPredicted RBP15.02□□□□□ -0.01
BRF1-215ENST00000549655 SLC25A39Q9BZJ4 359 aaPredicted RBP15.02□□□□□ -0.01
BRF1-215ENST00000549655 MRPL27Q9P0M9 148 aaKnown RBP15.02□□□□□ -0.01
BRF1-215ENST00000549655 FBXL7Q9UJT9 491 aa15.02□□□□□ -0.01
BRF1-215ENST00000549655 HNF1AP20823 631 aa15.01□□□□□ -0.01
BRF1-215ENST00000549655 GATA3P23771 443 aa15.01□□□□□ -0.01
BRF1-215ENST00000549655 GALR1P47211 349 aa15.01□□□□□ -0.01
BRF1-215ENST00000549655 OR5B12Q96R08 314 aa15.01□□□□□ -0.01
BRF1-215ENST00000549655 POLQO75417 2590 aa15.01□□□□□ -0.01
BRF1-215ENST00000549655 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.01□□□□□ -0.016e-10■■■■□ 23.3
BRF1-215ENST00000549655 CENPEQ02224 2701 aa15□□□□□ -0.01
BRF1-215ENST00000549655 AVPP01185 164 aa15□□□□□ -0.01
BRF1-215ENST00000549655 IGHV3-23P01764 117 aa15□□□□□ -0.01
BRF1-215ENST00000549655 PFN1P07737 140 aaKnown RBP15□□□□□ -0.01
BRF1-215ENST00000549655 CD99P14209 185 aa15□□□□□ -0.01
BRF1-215ENST00000549655 GP9P14770 177 aa15□□□□□ -0.01
BRF1-215ENST00000549655 YPEL3P61236 119 aaPredicted RBP15□□□□□ -0.01
BRF1-215ENST00000549655 ZNF491Q8N8L2 437 aa15□□□□□ -0.01
BRF1-215ENST00000549655 LINC01356Q8N9X3 169 aa15□□□□□ -0.01
BRF1-215ENST00000549655 BLNKQ8WV28 456 aa15□□□□□ -0.01
BRF1-215ENST00000549655 FAM210BQ96KR6 192 aa15□□□□□ -0.01
BRF1-215ENST00000549655 PTPN13Q12923 2485 aa15□□□□□ -0.01
BRF1-215ENST00000549655 NBEAP1P0C6P0 100 aa15□□□□□ -0.01
BRF1-215ENST00000549655 HIST1H1BP16401 226 aaKnown RBP15□□□□□ -0.01
BRF1-215ENST00000549655 ZNF329Q86UD4 541 aa15□□□□□ -0.01
BRF1-215ENST00000549655 C1QL4Q86Z23 238 aa15□□□□□ -0.01
BRF1-215ENST00000549655 SFRP2Q96HF1 295 aa15□□□□□ -0.01
BRF1-215ENST00000549655 LY96Q9Y6Y9 160 aa15□□□□□ -0.01
BRF1-215ENST00000549655 CSMD2Q7Z408 3487 aa14.99□□□□□ -0.01
BRF1-215ENST00000549655 USP9YO00507 2555 aaPredicted RBP14.99□□□□□ -0.01
BRF1-215ENST00000549655 TRBV24-1A0A075B6N3 115 aa14.99□□□□□ -0.01
BRF1-215ENST00000549655 MDFIC2A0A1B0GVS7 189 aa14.99□□□□□ -0.01
BRF1-215ENST00000549655 G3V318 75 aa14.99□□□□□ -0.01
BRF1-215ENST00000549655 IL4P05112 153 aa14.99□□□□□ -0.01
BRF1-215ENST00000549655 S100PP25815 95 aa14.99□□□□□ -0.01
BRF1-215ENST00000549655 RANP62826 216 aaKnown RBP14.99□□□□□ -0.01
BRF1-215ENST00000549655 CENPWQ5EE01 88 aa14.99□□□□□ -0.01
BRF1-215ENST00000549655 RNF125Q96EQ8 232 aa14.99□□□□□ -0.01
BRF1-215ENST00000549655 CELSR1Q9NYQ6 3014 aa14.99□□□□□ -0.01
BRF1-215ENST00000549655 WI2-2373I1.2A0A1W2PRP0 233 aa14.98□□□□□ -0.01
BRF1-215ENST00000549655 K7EN84 100 aa14.98□□□□□ -0.01
BRF1-215ENST00000549655 AMY1AP04745 511 aa14.98□□□□□ -0.01
BRF1-215ENST00000549655 GNG4P50150 75 aa14.98□□□□□ -0.01
BRF1-215ENST00000549655 TMEM68Q96MH6 324 aa14.98□□□□□ -0.01
BRF1-215ENST00000549655 OR2T8A6NH00 312 aa14.98□□□□□ -0.01
BRF1-215ENST00000549655 PPP1R2P9O14990 202 aa14.98□□□□□ -0.01
BRF1-215ENST00000549655 MYCNOSP40205 109 aa14.98□□□□□ -0.01
BRF1-215ENST00000549655 ZNF600Q6ZNG1 722 aa14.98□□□□□ -0.01
BRF1-215ENST00000549655 SAV1Q9H4B6 383 aaPredicted RBP14.98□□□□□ -0.01
BRF1-215ENST00000549655 BIN3Q9NQY0 253 aa14.98□□□□□ -0.01
BRF1-215ENST00000549655 KLK9Q2XQG4 91 aa14.97□□□□□ -0.01
BRF1-215ENST00000549655 MAPK1IP1LQ8NDC0 245 aa14.97□□□□□ -0.01
BRF1-215ENST00000549655 VN1R17PQ8TDU5 208 aa14.97□□□□□ -0.01
BRF1-215ENST00000549655 SHANK2-AS3Q9BTD1 123 aa14.97□□□□□ -0.01
BRF1-215ENST00000549655 BEX4Q9NWD9 120 aaPredicted RBP14.97□□□□□ -0.01
BRF1-215ENST00000549655 TMEM14CQ9P0S9 112 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms