RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 MYCNOSP40205 109 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 ERHP84090 104 aaKnown RBP11.07□□□□□ -0.64
HDAC7-228ENST00000548938 DEFB109BQ30KR1 87 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 ASCL5Q7RTU5 278 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 OR1L4Q8NGR5 311 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 GTSF1Q8WW33 167 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 GAFA1Q96PS6 74 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 ZNF71Q9NQZ8 489 aaPredicted RBP11.07□□□□□ -0.64
HDAC7-228ENST00000548938 RAI1Q7Z5J4 1906 aaPredicted RBP11.07□□□□□ -0.64
HDAC7-228ENST00000548938 SMG1Q96Q15 3661 aaKnown RBP11.07□□□□□ -0.64
HDAC7-228ENST00000548938 TRAV30A0A087WSZ9 112 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 NUDT3O95989 172 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 WT1-ASQ06250 92 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 IGFL2Q6UWQ7 119 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 BHLHA15Q7RTS1 189 aaPredicted RBP11.07□□□□□ -0.64
HDAC7-228ENST00000548938 LINC00305Q7Z4B0 112 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 MCRIP2Q9BUT9 160 aaKnown RBP11.07□□□□□ -0.64
HDAC7-228ENST00000548938 RPP21Q9H633 154 aaKnown RBP11.07□□□□□ -0.64
HDAC7-228ENST00000548938 EPDR1Q9UM22 224 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 RNF24Q9Y225 148 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 SLC25A15Q9Y619 301 aa11.07□□□□□ -0.64
HDAC7-228ENST00000548938 TCRBV4S1A1TA0A5B7 111 aa11.06□□□□□ -0.64
HDAC7-228ENST00000548938 MOSP00540 346 aa11.06□□□□□ -0.64
HDAC7-228ENST00000548938 REG1BP48304 166 aa11.06□□□□□ -0.64
HDAC7-228ENST00000548938 ZNF137PP52743 207 aa11.06□□□□□ -0.64
HDAC7-228ENST00000548938 PDPNQ86YL7 162 aa11.06□□□□□ -0.64
HDAC7-228ENST00000548938 PGLYRP4Q96LB8 373 aa11.06□□□□□ -0.64
HDAC7-228ENST00000548938 M0R1B8 84 aa11.06□□□□□ -0.64
HDAC7-228ENST00000548938 LEPROTL1O95214 131 aa11.06□□□□□ -0.64
HDAC7-228ENST00000548938 BVES-AS1Q5T3Y7 98 aa11.06□□□□□ -0.64
HDAC7-228ENST00000548938 FAM222BQ8WU58 562 aa11.06□□□□□ -0.64
HDAC7-228ENST00000548938 PLSCR4Q9NRQ2 329 aa11.06□□□□□ -0.64
HDAC7-228ENST00000548938 MUC21A0A0G2JKD1 596 aa11.05□□□□□ -0.64
HDAC7-228ENST00000548938 MUC21A0A140T8X8 626 aa11.05□□□□□ -0.64
HDAC7-228ENST00000548938 PGPA6NDG6 321 aa11.05□□□□□ -0.64
HDAC7-228ENST00000548938 OR2T8A6NH00 312 aa11.05□□□□□ -0.64
HDAC7-228ENST00000548938 CGB1A6NKQ9 187 aa11.05□□□□□ -0.64
HDAC7-228ENST00000548938 CIDEAO60543 219 aa11.05□□□□□ -0.64
HDAC7-228ENST00000548938 MUC21Q5SSG8 566 aa11.05□□□□□ -0.64
HDAC7-228ENST00000548938 RBMXL3Q8N7X1 1067 aaKnown RBP11.05□□□□□ -0.64
HDAC7-228ENST00000548938 C1RLQ9NZP8 487 aa11.05□□□□□ -0.64
HDAC7-228ENST00000548938 SLC25A34Q6PIV7 304 aa11.05□□□□□ -0.64
HDAC7-228ENST00000548938 OSR1Q8TAX0 266 aaPredicted RBP11.05□□□□□ -0.64
HDAC7-228ENST00000548938 GPR82Q96P67 336 aa11.05□□□□□ -0.64
HDAC7-228ENST00000548938 MLST8Q9BVC4 326 aa11.05□□□□□ -0.64
HDAC7-228ENST00000548938 RNF7Q9UBF6 113 aa11.05□□□□□ -0.64
HDAC7-228ENST00000548938 DCHS1Q96JQ0 3298 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 H3BTX0 84 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 ORM2P19652 201 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 ZNF138P52744 262 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 RHOGP84095 191 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 TMEM177Q53S58 311 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 RUSC1-AS1Q66K80 236 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 ZNF833PQ6ZTB9 187 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 CHCHD1Q96BP2 118 aaKnown RBP11.04□□□□□ -0.64
HDAC7-228ENST00000548938 LINC00574Q9H8X3 128 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 PROCRQ9UNN8 238 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 PLCE1Q9P212 2302 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 MGAQ8IWI9 3026 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 H0Y8G0 127 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 APOA2P02652 100 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 FAM162BQ5T6X4 162 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 ETFRF1Q6IPR1 90 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 KLF12Q9Y4X4 402 aa11.04□□□□□ -0.64
HDAC7-228ENST00000548938 CBY3A6NI87 242 aa11.03□□□□□ -0.64
HDAC7-228ENST00000548938 A8MWL6 223 aa11.03□□□□□ -0.64
HDAC7-228ENST00000548938 P01737 135 aa11.03□□□□□ -0.64
HDAC7-228ENST00000548938 PSG1P11464 419 aa11.03□□□□□ -0.64
HDAC7-228ENST00000548938 LDLRAD2Q5SZI1 272 aa11.03□□□□□ -0.64
HDAC7-228ENST00000548938 PRSS22Q9GZN4 317 aa11.03□□□□□ -0.64
HDAC7-228ENST00000548938 TRAV17A0A0B4J275 112 aa11.03□□□□□ -0.64
HDAC7-228ENST00000548938 DEFB125Q8N687 156 aa11.03□□□□□ -0.64
HDAC7-228ENST00000548938 THAP8Q8NA92 274 aa11.03□□□□□ -0.64
HDAC7-228ENST00000548938 OR1B1Q8NGR6 318 aa11.03□□□□□ -0.64
HDAC7-228ENST00000548938 TMEM191AQ9H0A3 160 aa11.03□□□□□ -0.64
HDAC7-228ENST00000548938 C19orf71A6NCJ1 209 aa11.02□□□□□ -0.64
HDAC7-228ENST00000548938 CEACAM4O75871 244 aa11.02□□□□□ -0.64
HDAC7-228ENST00000548938 ZNF788Q6ZQV5 615 aa11.02□□□□□ -0.64
HDAC7-228ENST00000548938 PMCHL2Q9BQD1 86 aa11.02□□□□□ -0.64
HDAC7-228ENST00000548938 SCRT2Q9NQ03 307 aa11.02□□□□□ -0.64
HDAC7-228ENST00000548938 DKK4Q9UBT3 224 aa11.02□□□□□ -0.64
HDAC7-228ENST00000548938 C22orf46C9J442 243 aa11.02□□□□□ -0.65
HDAC7-228ENST00000548938 GATA4P43694 442 aa11.02□□□□□ -0.65
HDAC7-228ENST00000548938 DIAPH2-AS1Q14236 149 aa11.02□□□□□ -0.65
HDAC7-228ENST00000548938 FLYWCH2Q96CP2 140 aaKnown RBP11.02□□□□□ -0.65
HDAC7-228ENST00000548938 TIMM8BQ9Y5J9 83 aaPredicted RBP11.02□□□□□ -0.65
HDAC7-228ENST00000548938 PLXNB1O43157 2135 aa11.02□□□□□ -0.65
HDAC7-228ENST00000548938 LOC102724200A0A096LPH7 203 aaPredicted RBP11.01□□□□□ -0.65
HDAC7-228ENST00000548938 HSBP1L1C9JCN9 74 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 INS-IGF2F8WCM5 200 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 CCL3L1P16619 93 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 GLRXP35754 106 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 TNFAIP6P98066 277 aaPredicted RBP11.01□□□□□ -0.65
HDAC7-228ENST00000548938 Q71RC1 249 aaPredicted RBP11.01□□□□□ -0.65
HDAC7-228ENST00000548938 TMEM167AQ8TBQ9 72 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 SMIM12Q96EX1 92 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 PERPQ96FX8 193 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 CST9LQ9H4G1 147 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 ZNF835Q9Y2P0 537 aa11.01□□□□□ -0.65
HDAC7-228ENST00000548938 MAP1BP46821 2468 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms