RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 F11RQ9Y624 299 aaKnown RBP8.79□□□□□ -1
CUX1-212ENST00000547394 MDFIC2A0A1B0GVS7 189 aa8.79□□□□□ -1
CUX1-212ENST00000547394 ZNF320A2RRD8 509 aa8.79□□□□□ -1
CUX1-212ENST00000547394 FNDC10F2Z333 226 aa8.79□□□□□ -1
CUX1-212ENST00000547394 FOSL1P15407 271 aa8.79□□□□□ -1
CUX1-212ENST00000547394 CDX1P47902 265 aaPredicted RBP8.79□□□□□ -1
CUX1-212ENST00000547394 EFNA4P52798 201 aa8.79□□□□□ -1
CUX1-212ENST00000547394 CTDSP1Q9GZU7 261 aa8.79□□□□□ -1
CUX1-212ENST00000547394 GAR1Q9NY12 217 aaKnown RBP8.79□□□□□ -1
CUX1-212ENST00000547394 HELTA6NFD8 242 aa8.79□□□□□ -1
CUX1-212ENST00000547394 ODF3BA8MYP8 253 aa8.79□□□□□ -1
CUX1-212ENST00000547394 PPP5D1E7EU14 171 aa8.79□□□□□ -1
CUX1-212ENST00000547394 PSG1P11464 419 aa8.79□□□□□ -1
CUX1-212ENST00000547394 TEX38Q6PEX7 206 aa8.79□□□□□ -1
CUX1-212ENST00000547394 OR10D4PQ8NGN7 298 aa8.79□□□□□ -1
CUX1-212ENST00000547394 OR2T10Q8NGZ9 312 aa8.79□□□□□ -1
CUX1-212ENST00000547394 OR1P1Q8NH06 330 aa8.79□□□□□ -1
CUX1-212ENST00000547394 TMEM242Q9NWH2 141 aa8.79□□□□□ -1
CUX1-212ENST00000547394 DOPEY2Q9Y3R5 2298 aa8.78□□□□□ -1
CUX1-212ENST00000547394 TAS2R45P59539 299 aa8.78□□□□□ -1
CUX1-212ENST00000547394 ERVFC1-1P60608 527 aa8.78□□□□□ -1
CUX1-212ENST00000547394 CX3CL1P78423 397 aa8.78□□□□□ -1
CUX1-212ENST00000547394 TMEM249Q2WGJ8 235 aa8.78□□□□□ -1
CUX1-212ENST00000547394 BRD3OSQ6XYD6 125 aa8.78□□□□□ -1
CUX1-212ENST00000547394 IMMP2LQ96T52 175 aa8.78□□□□□ -1
CUX1-212ENST00000547394 TRBV24-1A0A075B6N3 115 aa8.78□□□□□ -1
CUX1-212ENST00000547394 FSTL3O95633 263 aa8.78□□□□□ -1
CUX1-212ENST00000547394 GNG4P50150 75 aa8.78□□□□□ -1
CUX1-212ENST00000547394 LMO4P61968 165 aa8.78□□□□□ -1
CUX1-212ENST00000547394 PRR27Q6MZM9 219 aa8.78□□□□□ -1
CUX1-212ENST00000547394 TBX15Q96SF7 602 aa8.78□□□□□ -1
CUX1-212ENST00000547394 TMEM167BQ9NRX6 74 aa8.78□□□□□ -1
CUX1-212ENST00000547394 MXRA5Q9NR99 2828 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 A1L4Q6 167 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 INS-IGF2F8WCM5 200 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 PHOX2AO14813 284 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 SAA4P35542 130 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 TMEM219Q86XT9 240 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 THAP8Q8NA92 274 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 FXYD5Q96DB9 178 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 BBC3Q96PG8 261 aaPredicted RBP8.77□□□□□ -1.01
CUX1-212ENST00000547394 LINC01548A6NM66 108 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 I3L2K1 104 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 M0R1W7 72 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 CRYGCP07315 174 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 CEACAM3P40198 252 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 C5orf64Q2M2E5 130 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 ZNF600Q6ZNG1 722 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 PIP4P2Q8N4L2 257 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 OR10G8Q8NGN5 311 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 LINC00527Q9UJ94 153 aa8.77□□□□□ -1.01
CUX1-212ENST00000547394 K7EIM0 57 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 IGLC1P0CG04 106 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 FABP4P15090 132 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 TMEM11P17152 192 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 C17orf77Q96MU5 243 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 RBM14Q96PK6 669 aaKnown RBP8.76□□□□□ -1.01
CUX1-212ENST00000547394 SIRPDQ9H106 197 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 SERTAD4Q9NUC0 356 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 SONP18583 2426 aaKnown RBP8.76□□□□□ -1.01
CUX1-212ENST00000547394 IGHV4-61A0A0C4DH41 118 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 ISLRO14498 428 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 IGKV1-17P01599 117 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 CBLN1P23435 193 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 ATP5IP56385 69 aaPredicted RBP8.76□□□□□ -1.01
CUX1-212ENST00000547394 BPIFB3P59826 476 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 TMEM116Q8NCL8 245 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 C22orf15Q8WYQ4 148 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 FAM168AQ92567 244 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 ANAPC16Q96DE5 110 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 PERPQ96FX8 193 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 HSPB9Q9BQS6 159 aa8.76□□□□□ -1.01
CUX1-212ENST00000547394 TRAV8-1A0A0A6YYK1 113 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 IGHV2-70DA0A0C4DH43 119 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 HYPMO75409 117 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 OR2J3O76001 311 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 PAX2Q02962 417 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 ECSCRQ19T08 205 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 RASL11BQ9BPW5 248 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 ZNF469Q96JG9 3925 aaPredicted RBP8.75□□□□□ -1.01
CUX1-212ENST00000547394 PGPA6NDG6 321 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 PPP1R2P9O14990 202 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 GATCO43716 136 aaKnown RBP8.75□□□□□ -1.01
CUX1-212ENST00000547394 DEFA6Q01524 100 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 OR8I2Q8N0Y5 310 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 EXOC3-AS1Q8N2X6 119 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 MAPK1IP1LQ8NDC0 245 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 OR1L4Q8NGR5 311 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 SRD5A3Q9H8P0 318 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 TEX15Q9BXT5 2789 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 UBR5O95071 2799 aaPredicted RBP8.75□□□□□ -1.01
CUX1-212ENST00000547394 GRIFINA4D1Z8 144 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 ZNF329Q86UD4 541 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 ARPC1AQ92747 370 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 CCL19Q99731 98 aa8.75□□□□□ -1.01
CUX1-212ENST00000547394 CREBBPQ92793 2442 aa8.74□□□□□ -1.01
CUX1-212ENST00000547394 IGLV2-8P01709 118 aa8.74□□□□□ -1.01
CUX1-212ENST00000547394 SLC25A5P05141 298 aaKnown RBP8.74□□□□□ -1.01
CUX1-212ENST00000547394 ETFRF1Q6IPR1 90 aa8.74□□□□□ -1.01
CUX1-212ENST00000547394 C11orf52Q96A22 123 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms