RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 PLEKHF2Q9H8W4 249 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 LRTM1Q9HBL6 345 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 FAM206AQ9NX38 181 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 ZNF391Q9UJN7 358 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 SNX10Q9Y5X0 201 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 RFNGQ9Y644 331 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 STAB1Q9NY15 2570 aa2.66□□□□□ -1.98
SNHG1-217ENST00000541578 IGLV4-60A0A075B6I1 120 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 A0A096LPI6 279 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 A0A1B0GX78 115 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 A0A1B0GXF2 115 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 OR5H14A6NHG9 310 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 FAM183AA6NL82 134 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 ZNF850A8MQ14 1090 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 CEACAM18A8MTB9 384 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 H0Y980 276 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 SLC17A3O00476 420 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 AZIN1O14977 448 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 ZNF207O43670 478 aaKnown RBP2.65□□□□□ -1.99
SNHG1-217ENST00000541578 MPZL1O95297 269 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 NRASP01111 189 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 HRASP01112 189 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 KRASP01116 189 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 CD28P10747 220 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 HIST1H1CP16403 213 aaKnown RBP2.65□□□□□ -1.99
SNHG1-217ENST00000541578 GPX2P18283 190 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 CELP19835 753 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 KDELR1P24390 212 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 GRPRP30550 384 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 RANP62826 216 aaKnown RBP2.65□□□□□ -1.99
SNHG1-217ENST00000541578 EIF5AP63241 154 aaKnown RBP2.65□□□□□ -1.99
SNHG1-217ENST00000541578 SKP2Q13309 424 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 PEA15Q15121 130 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 SURF2Q15527 256 aaPredicted RBP2.65□□□□□ -1.99
SNHG1-217ENST00000541578 MAPK14Q16539 360 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 ACSM3Q53FZ2 586 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 FAM74A1Q5RGS3 127 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 COL5A1-AS1Q5SY13 56 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 HENMT1Q5T8I9 393 aaKnown RBP2.65□□□□□ -1.99
SNHG1-217ENST00000541578 TMEM42Q69YG0 159 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 GLYATQ6IB77 296 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 PRSS54Q6PEW0 395 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 WDR59Q6PJI9 974 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 DRAM2Q6UX65 266 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 SHISA6Q6ZSJ9 500 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 SLC36A1Q7Z2H8 476 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 PDZD9Q8IXQ8 264 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 C2orf73Q8N5S3 287 aaPredicted RBP2.65□□□□□ -1.99
SNHG1-217ENST00000541578 OR11G2Q8NGC1 345 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 OR8A1Q8NGG7 326 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 OR8D4Q8NGM9 314 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 OR13C4Q8NGS5 318 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 SGMS2Q8NHU3 365 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 SKA2Q8WVK7 121 aaPredicted RBP2.65□□□□□ -1.99
SNHG1-217ENST00000541578 RTN4IP1Q8WWV3 396 aaPredicted RBP2.65□□□□□ -1.99
SNHG1-217ENST00000541578 ROPN1LQ96C74 230 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 OR7D2Q96RA2 312 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 OR52E6Q96RD3 313 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 RNF5Q99942 180 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 VPS29Q9UBQ0 182 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 HHLA2Q9UM44 414 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 POMPQ9Y244 141 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 RNF11Q9Y3C5 154 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 ZNF706Q9Y5V0 76 aaPredicted RBP2.65□□□□□ -1.99
SNHG1-217ENST00000541578 SONP18583 2426 aaKnown RBP2.65□□□□□ -1.99
SNHG1-217ENST00000541578 ZNF407Q9C0G0 2248 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 SNRNP200O75643 2136 aaKnown RBP2.65□□□□□ -1.99
SNHG1-217ENST00000541578 FREM3P0C091 2139 aa2.65□□□□□ -1.99
SNHG1-217ENST00000541578 HEATR5BQ9P2D3 2071 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.64□□□□□ -1.99
SNHG1-217ENST00000541578 TRAPPC13A5PLN9 417 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 PRORSD1PA6NEY8 169 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 OR6C6A6NF89 314 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 PPP5D1E7EU14 171 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 RPL36A-HNRNPH2H7BZ11 118 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 SYNGR1O43759 233 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 PDE6DO43924 150 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 OR7C2O60412 319 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 GPR75O95800 540 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 SOD1P00441 154 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 MT-ND4LP03901 98 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 UCHL1P09936 223 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 UGT2B7P16662 529 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 RPS3P23396 243 aaKnown RBP eCLIP2.64□□□□□ -1.99
SNHG1-217ENST00000541578 CRHBPP24387 322 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 S100A7P31151 101 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 CMC4P56277 68 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-217ENST00000541578 GABARAPL2P60520 117 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 CKS1BP61024 79 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 TBPL1P62380 186 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 HBA1P69905 142 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 BTN3A2P78410 334 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 DEFA5Q01523 94 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 TFF3Q07654 80 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 TMEM241Q24JQ0 296 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 ABCA11PQ4W5N1 156 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 FAM162BQ5T6X4 162 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 Q5W150 140 aa2.64□□□□□ -1.99
SNHG1-217ENST00000541578 EIF5AL1Q6IS14 154 aaKnown RBP2.64□□□□□ -1.99
SNHG1-217ENST00000541578 Q6P435 159 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms