RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 Q6ZNX1 250 aa10.67□□□□□ -0.7
LTBR-209ENST00000541102 TMEM252Q8N6L7 170 aa10.67□□□□□ -0.7
LTBR-209ENST00000541102 SLC35E1Q96K37 410 aa10.67□□□□□ -0.7
LTBR-209ENST00000541102 ZFAND3Q9H8U3 227 aa10.67□□□□□ -0.7
LTBR-209ENST00000541102 GAR1Q9NY12 217 aaKnown RBP10.67□□□□□ -0.7
LTBR-209ENST00000541102 PUS1Q9Y606 427 aaKnown RBP eCLIP10.67□□□□□ -0.7
LTBR-209ENST00000541102 IGHV3-49A0A0A0MS15 119 aa10.66□□□□□ -0.7
LTBR-209ENST00000541102 YIF1AO95070 293 aa10.66□□□□□ -0.7
LTBR-209ENST00000541102 NHLH2Q02577 135 aa10.66□□□□□ -0.7
LTBR-209ENST00000541102 TMEM182Q6ZP80 229 aaPredicted RBP10.66□□□□□ -0.7
LTBR-209ENST00000541102 TMEM217Q8N7C4 229 aa10.66□□□□□ -0.7
LTBR-209ENST00000541102 OR1S2Q8NGQ3 325 aa10.66□□□□□ -0.7
LTBR-209ENST00000541102 SRD5A3Q9H8P0 318 aa10.66□□□□□ -0.7
LTBR-209ENST00000541102 MBD2Q9UBB5 411 aa10.66□□□□□ -0.7
LTBR-209ENST00000541102 E5RGE8 158 aa10.65□□□□□ -0.7
LTBR-209ENST00000541102 G3V3Q6 166 aa10.65□□□□□ -0.7
LTBR-209ENST00000541102 APOHP02749 345 aaPredicted RBP10.65□□□□□ -0.7
LTBR-209ENST00000541102 PVALBP20472 110 aaPredicted RBP10.65□□□□□ -0.7
LTBR-209ENST00000541102 DLK1P80370 383 aa10.65□□□□□ -0.7
LTBR-209ENST00000541102 RELQ04864 619 aaPredicted RBP10.65□□□□□ -0.7
LTBR-209ENST00000541102 ZNF600Q6ZNG1 722 aa10.65□□□□□ -0.7
LTBR-209ENST00000541102 THAP8Q8NA92 274 aa10.65□□□□□ -0.7
LTBR-209ENST00000541102 OR10P1Q8NGE3 313 aa10.65□□□□□ -0.7
LTBR-209ENST00000541102 SPATA25Q9BR10 227 aa10.65□□□□□ -0.7
LTBR-209ENST00000541102 DAZ1Q9NQZ3 744 aaKnown RBP10.65□□□□□ -0.7
LTBR-209ENST00000541102 NBEAL2Q6ZNJ1 2754 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 IGHV3OR16-13A0A075B7E8 117 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 TRAV30A0A087WSZ9 112 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 IGHV3-74A0A0B4J1X5 117 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 TRAV25A0A0B4J276 109 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 SMCO3A2RU48 225 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 RBMY1BA6NDE4 496 aaKnown RBP10.64□□□□□ -0.71
LTBR-209ENST00000541102 RBMY1EA6NEQ0 496 aaKnown RBP10.64□□□□□ -0.71
LTBR-209ENST00000541102 ZFP92A6NM28 416 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 SMLR1H3BR10 107 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 RLN2P04090 185 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 GIPP09681 153 aaPredicted RBP10.64□□□□□ -0.71
LTBR-209ENST00000541102 RBMY1DP0C7P1 496 aaKnown RBP10.64□□□□□ -0.71
LTBR-209ENST00000541102 PSG1P11464 419 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 GATA2P23769 480 aaPredicted RBP10.64□□□□□ -0.71
LTBR-209ENST00000541102 P2RY1P47900 373 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 SULT1A1P50225 295 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 YPEL3P61236 119 aaPredicted RBP10.64□□□□□ -0.71
LTBR-209ENST00000541102 EWSR1Q01844 656 aaKnown RBP eCLIP10.64□□□□□ -0.71
LTBR-209ENST00000541102 AKR1C1Q04828 323 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 SLC38A11Q08AI6 406 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 OR2F1Q13607 317 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 LILRB2Q8N423 598 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 RETNQ9HD89 108 aa10.64□□□□□ -0.71
LTBR-209ENST00000541102 A0A1B0GVG6 124 aa10.63□□□□□ -0.71
LTBR-209ENST00000541102 C3orf84H3BNL1 204 aa10.63□□□□□ -0.71
LTBR-209ENST00000541102 K7EMT4 169 aa10.63□□□□□ -0.71
LTBR-209ENST00000541102 TOMM40O96008 361 aa10.63□□□□□ -0.71
LTBR-209ENST00000541102 LYL1P12980 280 aa10.63□□□□□ -0.71
LTBR-209ENST00000541102 USF2Q15853 346 aaPredicted RBP10.63□□□□□ -0.71
LTBR-209ENST00000541102 LAMTOR1Q6IAA8 161 aa10.63□□□□□ -0.71
LTBR-209ENST00000541102 LINC00322Q6ZN03 302 aaPredicted RBP10.63□□□□□ -0.71
LTBR-209ENST00000541102 TMEM144Q7Z5S9 345 aa10.63□□□□□ -0.71
LTBR-209ENST00000541102 MUC7Q8TAX7 377 aa10.63□□□□□ -0.71
LTBR-209ENST00000541102 TRGV9Q99603 122 aa10.63□□□□□ -0.71
LTBR-209ENST00000541102 hCG_2014768A0A024R1R8 64 aa10.62□□□□□ -0.71
LTBR-209ENST00000541102 IGHV3-66A0A0C4DH42 116 aa10.62□□□□□ -0.71
LTBR-209ENST00000541102 RD3LP0DJH9 198 aa10.62□□□□□ -0.71
LTBR-209ENST00000541102 STPG3Q8N7X2 389 aa10.62□□□□□ -0.71
LTBR-209ENST00000541102 CITED4Q96RK1 184 aa10.62□□□□□ -0.71
LTBR-209ENST00000541102 SMPXQ9UHP9 88 aa10.62□□□□□ -0.71
LTBR-209ENST00000541102 IGHV7-4-1A0A0J9YVY3 117 aa10.61□□□□□ -0.71
LTBR-209ENST00000541102 IL4P05112 153 aa10.61□□□□□ -0.71
LTBR-209ENST00000541102 RAP2BP61225 183 aa10.61□□□□□ -0.71
LTBR-209ENST00000541102 VWC2Q2TAL6 325 aa10.61□□□□□ -0.71
LTBR-209ENST00000541102 OR51G1Q8NGK1 321 aa10.61□□□□□ -0.71
LTBR-209ENST00000541102 OR2T35Q8NGX2 323 aa10.61□□□□□ -0.71
LTBR-209ENST00000541102 MGST2Q99735 147 aa10.61□□□□□ -0.71
LTBR-209ENST00000541102 FAM110AQ9BQ89 295 aa10.61□□□□□ -0.71
LTBR-209ENST00000541102 RHPN1-AS1Q9BWJ2 59 aa10.61□□□□□ -0.71
LTBR-209ENST00000541102 UBQLN2Q9UHD9 624 aa10.61□□□□□ -0.71
LTBR-209ENST00000541102 FNDC10F2Z333 226 aa10.6□□□□□ -0.71
LTBR-209ENST00000541102 CHEK1O14757 476 aa10.6□□□□□ -0.71
LTBR-209ENST00000541102 TSPAN4O14817 238 aa10.6□□□□□ -0.71
LTBR-209ENST00000541102 RPL12P30050 165 aaKnown RBP10.6□□□□□ -0.71
LTBR-209ENST00000541102 CLINT1Q14677 625 aa10.6□□□□□ -0.71
LTBR-209ENST00000541102 STX12Q86Y82 276 aa10.6□□□□□ -0.71
LTBR-209ENST00000541102 OR5C1Q8NGR4 320 aa10.6□□□□□ -0.71
LTBR-209ENST00000541102 THAP6Q8TBB0 222 aa10.6□□□□□ -0.71
LTBR-209ENST00000541102 Q8WTZ3 238 aa10.6□□□□□ -0.71
LTBR-209ENST00000541102 ST8SIA2Q92186 375 aa10.6□□□□□ -0.71
LTBR-209ENST00000541102 RNF2Q99496 336 aa10.6□□□□□ -0.71
LTBR-209ENST00000541102 SPAG8Q99932 426 aaPredicted RBP10.6□□□□□ -0.71
LTBR-209ENST00000541102 GGACTQ9BVM4 153 aa10.6□□□□□ -0.71
LTBR-209ENST00000541102 SLC25A31Q9H0C2 315 aa10.6□□□□□ -0.71
LTBR-209ENST00000541102 WFDC1Q9HC57 220 aa10.6□□□□□ -0.71
LTBR-209ENST00000541102 NPVFQ9HCQ7 196 aa10.6□□□□□ -0.71
LTBR-209ENST00000541102 HSPB11Q9Y547 144 aa10.6□□□□□ -0.71
LTBR-209ENST00000541102 IGKV3-7A0A075B6H7 116 aa10.59□□□□□ -0.71
LTBR-209ENST00000541102 UBE2L5PA0A1B0GUS4 154 aa10.59□□□□□ -0.71
LTBR-209ENST00000541102 PET100P0DJ07 73 aa10.59□□□□□ -0.71
LTBR-209ENST00000541102 CRYBB3P26998 211 aa10.59□□□□□ -0.71
LTBR-209ENST00000541102 S100A11P31949 105 aa10.59□□□□□ -0.71
LTBR-209ENST00000541102 TFPI2P48307 235 aa10.59□□□□□ -0.71
LTBR-209ENST00000541102 LYZP61626 148 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms