RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	USF3	Q68DE3	2245 aa		12.9	□□□□□ -0.34
NCAPD3-213	ENST00000534532	FOXL2NB	Q6ZUU3	175 aa		12.9	□□□□□ -0.34
NCAPD3-213	ENST00000534532	BEX4	Q9NWD9	120 aa	Predicted RBP	12.9	□□□□□ -0.34
NCAPD3-213	ENST00000534532	IGKV1D-8	A0A087WSZ0	117 aa		12.9	□□□□□ -0.35
NCAPD3-213	ENST00000534532	CD55	P08174	381 aa		12.9	□□□□□ -0.35
NCAPD3-213	ENST00000534532	CCL20	P78556	96 aa		12.9	□□□□□ -0.35
NCAPD3-213	ENST00000534532	TCF15	Q12870	199 aa		12.9	□□□□□ -0.35
NCAPD3-213	ENST00000534532	COTL1	Q14019	142 aa		12.9	□□□□□ -0.35
NCAPD3-213	ENST00000534532	SIGLEC9	Q9Y336	463 aa		12.9	□□□□□ -0.35
NCAPD3-213	ENST00000534532	WFDC12	Q8WWY7	111 aa		12.89	□□□□□ -0.35
NCAPD3-213	ENST00000534532	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	12.89	□□□□□ -0.35
NCAPD3-213	ENST00000534532	MPZ	P25189	248 aa		12.89	□□□□□ -0.35
NCAPD3-213	ENST00000534532	IGHV1-69D	A0A0B4J2H0	117 aa		12.89	□□□□□ -0.35
NCAPD3-213	ENST00000534532	IGHV1-69	P01742	117 aa		12.89	□□□□□ -0.35
NCAPD3-213	ENST00000534532	PSG1	P11464	419 aa		12.89	□□□□□ -0.35
NCAPD3-213	ENST00000534532	TMEM183A	Q8IXX5	376 aa		12.89	□□□□□ -0.35
NCAPD3-213	ENST00000534532	DPH3P1	Q9H4G8	78 aa		12.89	□□□□□ -0.35
NCAPD3-213	ENST00000534532	NAPSA	O96009	420 aa		12.89	□□□□□ -0.35
NCAPD3-213	ENST00000534532	ABCA1	O95477	2261 aa		12.89	□□□□□ -0.35
NCAPD3-213	ENST00000534532	FABP2	P12104	132 aa		12.88	□□□□□ -0.35
NCAPD3-213	ENST00000534532	F11R	Q9Y624	299 aa	Known RBP	12.88	□□□□□ -0.35
NCAPD3-213	ENST00000534532	RCHY1	Q96PM5	261 aa		12.88	□□□□□ -0.35
NCAPD3-213	ENST00000534532	TRBV6-6	A0A0A6YYG2	114 aa		12.88	□□□□□ -0.35
NCAPD3-213	ENST00000534532	IZUMO1R	A6ND01	250 aa		12.88	□□□□□ -0.35
NCAPD3-213	ENST00000534532		F8VVB4	439 aa		12.88	□□□□□ -0.35
NCAPD3-213	ENST00000534532		F8VWA3	439 aa		12.88	□□□□□ -0.35
NCAPD3-213	ENST00000534532	RPL15	P61313	204 aa	Known RBP	12.88	□□□□□ -0.35
NCAPD3-213	ENST00000534532	EFNB3	Q15768	340 aa		12.88	□□□□□ -0.35
NCAPD3-213	ENST00000534532	TRAV9-1	A0A075B6T8	112 aa		12.88	□□□□□ -0.35
NCAPD3-213	ENST00000534532	ACTL10	Q5JWF8	245 aa		12.88	□□□□□ -0.35
NCAPD3-213	ENST00000534532	SCGB1A1	P11684	91 aa		12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	KLF17	Q5JT82	389 aa	Predicted RBP	12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532		Q6P435	159 aa		12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	NR2C2AP	Q86WQ0	139 aa		12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	TRGV9	Q99603	122 aa		12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	PKDREJ	Q9NTG1	2253 aa		12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	TRAV8-6	A0A0B4J262	113 aa		12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	HIGD1C	A8MV81	97 aa		12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	COQ2	Q96H96	371 aa		12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	PMCHL2	Q9BQD1	86 aa		12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	RUSC1-AS1	Q66K80	236 aa		12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	TCF23	Q7RTU1	214 aa		12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	NUDT10	Q8NFP7	164 aa		12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	DOCK8	Q8NF50	2099 aa		12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532		F2Z2F3	143 aa		12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	SRP19	P09132	144 aa	Known RBP	12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	SDHC	Q99643	169 aa	Predicted RBP	12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	UQCR10	Q9UDW1	63 aa		12.87	□□□□□ -0.35
NCAPD3-213	ENST00000534532	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	12.86	□□□□□ -0.35
NCAPD3-213	ENST00000534532	FOXC2	Q99958	501 aa		12.86	□□□□□ -0.35
NCAPD3-213	ENST00000534532	TNFSF13	O75888	250 aa		12.86	□□□□□ -0.35
NCAPD3-213	ENST00000534532	COL4A6	Q14031	1691 aa		12.86	□□□□□ -0.35
NCAPD3-213	ENST00000534532	INS	P01308	110 aa		12.86	□□□□□ -0.35
NCAPD3-213	ENST00000534532	BEND2	Q8NDZ0	799 aa		12.86	□□□□□ -0.35
NCAPD3-213	ENST00000534532	PMS2P5	A8MQ11	134 aa		12.86	□□□□□ -0.35
NCAPD3-213	ENST00000534532	GHRH	P01286	108 aa		12.86	□□□□□ -0.35
NCAPD3-213	ENST00000534532	RPLP1	P05386	114 aa	Known RBP	12.86	□□□□□ -0.35
NCAPD3-213	ENST00000534532	SRSF8	Q9BRL6	282 aa	Known RBP	12.86	□□□□□ -0.35
NCAPD3-213	ENST00000534532	RHPN1-AS1	Q9BWJ2	59 aa		12.86	□□□□□ -0.35
NCAPD3-213	ENST00000534532	DAZ1	Q9NQZ3	744 aa	Known RBP	12.86	□□□□□ -0.35
NCAPD3-213	ENST00000534532	TRGV1	A0A0A0MS02	117 aa		12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	RBMY1B	A6NDE4	496 aa	Known RBP	12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	RBMY1E	A6NEQ0	496 aa	Known RBP	12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	ADARB2-AS1	A8MUL3	147 aa		12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	PPBP	P02775	128 aa		12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	RBMY1D	P0C7P1	496 aa	Known RBP	12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	RBMY1A1	P0DJD3	496 aa	Known RBP	12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	RBMY1C	P0DJD4	496 aa		12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	SELENOK	Q9Y6D0	94 aa		12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	IGHV2-70D	A0A0C4DH43	119 aa		12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532		E9PQ18	207 aa		12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	PSCA	O43653	123 aa		12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	EFNB1	P98172	346 aa		12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	TREML4	Q6UXN2	200 aa		12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532		Q71RC1	249 aa	Predicted RBP	12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532		Q8TCH9	128 aa		12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	CBY1	Q9Y3M2	126 aa		12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	COL5A1-AS1	Q5SY13	56 aa		12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	HEATR1	Q9H583	2144 aa	Known RBP	12.85	□□□□□ -0.35
NCAPD3-213	ENST00000534532	SYNJ2BP	P57105	145 aa		12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	RPL36A	P83881	106 aa	Known RBP	12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	RPL36AL	Q969Q0	106 aa	Known RBP	12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	MCRIP2	Q9BUT9	160 aa	Known RBP	12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	REG4	Q9BYZ8	158 aa		12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	CYSLTR1	Q9Y271	337 aa		12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	LINC00477	Q96M19	166 aa		12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	SEPSECS	Q9HD40	501 aa	Known RBP	12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	NDP	Q00604	133 aa		12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	ASCL4	Q6XD76	172 aa		12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	CAD	P27708	2225 aa		12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	MUC6	Q6W4X9	2439 aa		12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	FREM3	P0C091	2139 aa		12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	TCF21	O43680	179 aa		12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	GATA4	P43694	442 aa		12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	RNF222	A6NCQ9	220 aa		12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	SRRM4	A7MD48	611 aa	Known RBP	12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	FCN3	O75636	299 aa		12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	PPIF	P30405	207 aa	Known RBP	12.84	□□□□□ -0.35
NCAPD3-213	ENST00000534532	SRSF1	Q07955	248 aa	Known RBP eCLIP	12.84	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 64 ms