RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 NDUFA13Q9P0J0 144 aa9.79□□□□□ -0.84
CAPN1-228ENST00000534373 V9GYH0 126 aa9.79□□□□□ -0.84
CAPN1-228ENST00000534373 FABP1P07148 127 aa9.78□□□□□ -0.84
CAPN1-228ENST00000534373 ZNF688P0C7X2 276 aa9.78□□□□□ -0.84
CAPN1-228ENST00000534373 SNRPD3P62318 126 aaKnown RBP9.78□□□□□ -0.84
CAPN1-228ENST00000534373 RAB11AP62491 216 aa9.78□□□□□ -0.84
CAPN1-228ENST00000534373 DHRS2Q13268 280 aa9.78□□□□□ -0.84
CAPN1-228ENST00000534373 OR8G2PQ6IF36 304 aa9.78□□□□□ -0.84
CAPN1-228ENST00000534373 TMED4Q7Z7H5 227 aa9.78□□□□□ -0.84
CAPN1-228ENST00000534373 CCDC190Q86UF4 302 aa9.78□□□□□ -0.84
CAPN1-228ENST00000534373 C11orf45Q8TAV5 145 aa9.78□□□□□ -0.84
CAPN1-228ENST00000534373 NRN1Q9NPD7 142 aa9.78□□□□□ -0.84
CAPN1-228ENST00000534373 TMED3Q9Y3Q3 217 aa9.78□□□□□ -0.84
CAPN1-228ENST00000534373 MED6O75586 246 aa9.77□□□□□ -0.85
CAPN1-228ENST00000534373 LY6G6CO95867 125 aa9.77□□□□□ -0.85
CAPN1-228ENST00000534373 GIG44P09565 113 aaPredicted RBP9.77□□□□□ -0.85
CAPN1-228ENST00000534373 GAMTQ14353 236 aa9.77□□□□□ -0.85
CAPN1-228ENST00000534373 ZNF79Q15937 498 aa9.77□□□□□ -0.85
CAPN1-228ENST00000534373 RNF125Q96EQ8 232 aa9.77□□□□□ -0.85
CAPN1-228ENST00000534373 CIB3Q96Q77 187 aaPredicted RBP9.77□□□□□ -0.85
CAPN1-228ENST00000534373 RAB40CQ96S21 281 aa9.77□□□□□ -0.85
CAPN1-228ENST00000534373 ALMS1Q8TCU4 4167 aa9.77□□□□□ -0.85
CAPN1-228ENST00000534373 ZFP92A6NM28 416 aa9.76□□□□□ -0.85
CAPN1-228ENST00000534373 SFT2D2O95562 160 aa9.76□□□□□ -0.85
CAPN1-228ENST00000534373 VAMP1P23763 118 aa9.76□□□□□ -0.85
CAPN1-228ENST00000534373 TCTAP57738 103 aa9.76□□□□□ -0.85
CAPN1-228ENST00000534373 UBE2MP61081 183 aaKnown RBP9.76□□□□□ -0.85
CAPN1-228ENST00000534373 NUTF2P61970 127 aaKnown RBP9.76□□□□□ -0.85
CAPN1-228ENST00000534373 RPP30P78346 268 aaKnown RBP9.76□□□□□ -0.85
CAPN1-228ENST00000534373 ACTL10Q5JWF8 245 aa9.76□□□□□ -0.85
CAPN1-228ENST00000534373 SPANXN2Q5MJ10 180 aa9.76□□□□□ -0.85
CAPN1-228ENST00000534373 C1orf194Q5T5A4 169 aa9.76□□□□□ -0.85
CAPN1-228ENST00000534373 SIGLEC15Q6ZMC9 328 aa9.76□□□□□ -0.85
CAPN1-228ENST00000534373 SLC35E1Q96K37 410 aa9.76□□□□□ -0.85
CAPN1-228ENST00000534373 HRH4Q9H3N8 390 aa9.76□□□□□ -0.85
CAPN1-228ENST00000534373 KNCNA6PVL3 124 aa9.75□□□□□ -0.85
CAPN1-228ENST00000534373 ZNF705EA8MWA4 302 aaPredicted RBP9.75□□□□□ -0.85
CAPN1-228ENST00000534373 SNRPGP15A8MWD9 76 aa9.75□□□□□ -0.85
CAPN1-228ENST00000534373 CFDP00746 253 aaPredicted RBP9.75□□□□□ -0.85
CAPN1-228ENST00000534373 MIFP14174 115 aa9.75□□□□□ -0.85
CAPN1-228ENST00000534373 PSMG4Q5JS54 123 aa9.75□□□□□ -0.85
CAPN1-228ENST00000534373 CENPSQ8N2Z9 138 aa9.75□□□□□ -0.85
CAPN1-228ENST00000534373 Q8NAQ8 132 aa9.75□□□□□ -0.85
CAPN1-228ENST00000534373 C1QTNF4Q9BXJ3 329 aa9.75□□□□□ -0.85
CAPN1-228ENST00000534373 FBXL17Q9UF56 701 aa9.75□□□□□ -0.85
CAPN1-228ENST00000534373 IGKV1D-37A0A075B6S9 117 aa9.74□□□□□ -0.85
CAPN1-228ENST00000534373 NAP1L6A6NFF2 107 aa9.74□□□□□ -0.85
CAPN1-228ENST00000534373 C11orf94C9JXX5 98 aa9.74□□□□□ -0.85
CAPN1-228ENST00000534373 NANOS2P60321 138 aaKnown RBP9.74□□□□□ -0.85
CAPN1-228ENST00000534373 LGALS9CQ6DKI2 356 aa9.74□□□□□ -0.85
CAPN1-228ENST00000534373 CSNK1G2-AS1Q8NCQ2 148 aa9.74□□□□□ -0.85
CAPN1-228ENST00000534373 TRGV9Q99603 122 aa9.74□□□□□ -0.85
CAPN1-228ENST00000534373 AGRNO00468 2067 aa9.73□□□□□ -0.85
CAPN1-228ENST00000534373 SYNGR2O43760 224 aa9.73□□□□□ -0.85
CAPN1-228ENST00000534373 NKX2-1P43699 371 aaPredicted RBP9.73□□□□□ -0.85
CAPN1-228ENST00000534373 ZNF90Q03938 601 aa9.73□□□□□ -0.85
CAPN1-228ENST00000534373 PPP1R1AQ13522 171 aa9.73□□□□□ -0.85
CAPN1-228ENST00000534373 GGNBP1Q5YKI7 109 aa9.73□□□□□ -0.85
CAPN1-228ENST00000534373 THAP8Q8NA92 274 aa9.73□□□□□ -0.85
CAPN1-228ENST00000534373 PBDC1Q9BVG4 233 aa9.73□□□□□ -0.85
CAPN1-228ENST00000534373 SRRQ9GZT4 340 aa9.73□□□□□ -0.85
CAPN1-228ENST00000534373 BIRC6Q9NR09 4857 aa9.73□□□□□ -0.85
CAPN1-228ENST00000534373 H3BMM0 161 aa9.72□□□□□ -0.85
CAPN1-228ENST00000534373 IAPPP10997 89 aa9.72□□□□□ -0.85
CAPN1-228ENST00000534373 C4BPBP20851 252 aa9.72□□□□□ -0.85
CAPN1-228ENST00000534373 ID1P41134 155 aa9.72□□□□□ -0.85
CAPN1-228ENST00000534373 INPP1P49441 399 aa9.72□□□□□ -0.85
CAPN1-228ENST00000534373 SAMD13Q5VXD3 122 aa9.72□□□□□ -0.85
CAPN1-228ENST00000534373 C2CD4CQ8TF44 421 aa9.72□□□□□ -0.85
CAPN1-228ENST00000534373 CLUHP3Q96NS8 147 aa9.72□□□□□ -0.85
CAPN1-228ENST00000534373 TBC1D24Q9ULP9 559 aa9.72□□□□□ -0.85
CAPN1-228ENST00000534373 SLC45A2Q9UMX9 530 aa9.72□□□□□ -0.85
CAPN1-228ENST00000534373 X6R8D5 127 aa9.72□□□□□ -0.85
CAPN1-228ENST00000534373 IGHV4-28A0A0C4DH34 117 aa9.71□□□□□ -0.86
CAPN1-228ENST00000534373 DEFB4AO15263 64 aa9.71□□□□□ -0.86
CAPN1-228ENST00000534373 NDUFB6O95139 128 aa9.71□□□□□ -0.86
CAPN1-228ENST00000534373 HOXB5P09067 269 aa9.71□□□□□ -0.86
CAPN1-228ENST00000534373 RBMY1A1P0DJD3 496 aaKnown RBP9.71□□□□□ -0.86
CAPN1-228ENST00000534373 RBMY1CP0DJD4 496 aa9.71□□□□□ -0.86
CAPN1-228ENST00000534373 HLA-DRB4P13762 266 aa9.71□□□□□ -0.86
CAPN1-228ENST00000534373 S100A7P31151 101 aa9.71□□□□□ -0.86
CAPN1-228ENST00000534373 ID3Q02535 119 aa9.71□□□□□ -0.86
CAPN1-228ENST00000534373 RBMY1FQ15415 496 aaKnown RBP9.71□□□□□ -0.86
CAPN1-228ENST00000534373 SPATA31B1PQ5VZV4 182 aa9.71□□□□□ -0.86
CAPN1-228ENST00000534373 TRIQKQ629K1 86 aa9.71□□□□□ -0.86
CAPN1-228ENST00000534373 HLA-DRB4X5D2U9 266 aa9.71□□□□□ -0.86
CAPN1-228ENST00000534373 IGKV1OR2-108A0A075B7D4 117 aa9.7□□□□□ -0.86
CAPN1-228ENST00000534373 C9orf170A2RU37 121 aa9.7□□□□□ -0.86
CAPN1-228ENST00000534373 PRSS46E5RG02 174 aa9.7□□□□□ -0.86
CAPN1-228ENST00000534373 WRBO00258 174 aa9.7□□□□□ -0.86
CAPN1-228ENST00000534373 PSMB3P49720 205 aa9.7□□□□□ -0.86
CAPN1-228ENST00000534373 LYZP61626 148 aa9.7□□□□□ -0.86
CAPN1-228ENST00000534373 CNPY1Q3B7I2 92 aa9.7□□□□□ -0.86
CAPN1-228ENST00000534373 OR8I2Q8N0Y5 310 aa9.7□□□□□ -0.86
CAPN1-228ENST00000534373 COQ8AQ8NI60 647 aa9.7□□□□□ -0.86
CAPN1-228ENST00000534373 PAIP2BQ9ULR5 123 aaKnown RBP9.7□□□□□ -0.86
CAPN1-228ENST00000534373 STRAPQ9Y3F4 350 aaKnown RBP9.7□□□□□ -0.86
CAPN1-228ENST00000534373 KMT2AQ03164 3969 aa9.7□□□□□ -0.86
CAPN1-228ENST00000534373 LINC00854A0A1B0GVQ3 168 aa9.69□□□□□ -0.86
CAPN1-228ENST00000534373 CENPXA8MT69 81 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms