RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 ZFAND3Q9H8U3 227 aa16.7■□□□□ 0.26
PKP3-210ENST00000533249 GSKIPQ9P0R6 139 aa16.7■□□□□ 0.26
PKP3-210ENST00000533249 CACNG5Q9UF02 275 aa16.7■□□□□ 0.26
PKP3-210ENST00000533249 RABAC1Q9UI14 185 aa16.7■□□□□ 0.26
PKP3-210ENST00000533249 A0A1B0GU03 582 aa16.69■□□□□ 0.26
PKP3-210ENST00000533249 SMCO1Q147U7 214 aa16.69■□□□□ 0.26
PKP3-210ENST00000533249 IAH1Q2TAA2 248 aaPredicted RBP16.69■□□□□ 0.26
PKP3-210ENST00000533249 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.69■□□□□ 0.26
PKP3-210ENST00000533249 SIX6O95475 246 aa16.68■□□□□ 0.26
PKP3-210ENST00000533249 TMEM50AO95807 157 aa16.68■□□□□ 0.26
PKP3-210ENST00000533249 IFNA17P01571 189 aa16.68■□□□□ 0.26
PKP3-210ENST00000533249 NMSQ5H8A3 153 aa16.68■□□□□ 0.26
PKP3-210ENST00000533249 A0A0G2JRQ6 117 aa16.67■□□□□ 0.26
PKP3-210ENST00000533249 A0A1B0GVG6 124 aa16.67■□□□□ 0.26
PKP3-210ENST00000533249 STHQ8IWL8 128 aa16.67■□□□□ 0.26
PKP3-210ENST00000533249 C2CD4CQ8TF44 421 aa16.67■□□□□ 0.26
PKP3-210ENST00000533249 C2orf50Q96LR7 162 aa16.67■□□□□ 0.26
PKP3-210ENST00000533249 TMEM231Q9H6L2 316 aa16.67■□□□□ 0.26
PKP3-210ENST00000533249 TRAV2A0A0B4J234 112 aa16.66■□□□□ 0.26
PKP3-210ENST00000533249 P0C879 139 aa16.66■□□□□ 0.26
PKP3-210ENST00000533249 RNASE2P10153 161 aaKnown RBP16.66■□□□□ 0.26
PKP3-210ENST00000533249 SLC25A6P12236 298 aa16.66■□□□□ 0.26
PKP3-210ENST00000533249 CYCSP99999 105 aaKnown RBP16.66■□□□□ 0.26
PKP3-210ENST00000533249 KRTAP17-1Q9BYP8 105 aa16.66■□□□□ 0.26
PKP3-210ENST00000533249 CACFD1Q9UGQ2 172 aa16.66■□□□□ 0.26
PKP3-210ENST00000533249 DNAH10Q8IVF4 4471 aa16.66■□□□□ 0.26
PKP3-210ENST00000533249 SCGB1D2O95969 90 aa16.65■□□□□ 0.26
PKP3-210ENST00000533249 NPPCP23582 126 aa16.65■□□□□ 0.26
PKP3-210ENST00000533249 HOXA1P49639 335 aaPredicted RBP16.65■□□□□ 0.26
PKP3-210ENST00000533249 SUB1P53999 127 aaKnown RBP eCLIP16.65■□□□□ 0.26
PKP3-210ENST00000533249 PRR20EP86478 221 aa16.65■□□□□ 0.26
PKP3-210ENST00000533249 PRR20CP86479 221 aa16.65■□□□□ 0.26
PKP3-210ENST00000533249 PRR20DP86480 221 aa16.65■□□□□ 0.26
PKP3-210ENST00000533249 PRR20BP86481 221 aa16.65■□□□□ 0.26
PKP3-210ENST00000533249 PRR20AP86496 221 aa16.65■□□□□ 0.26
PKP3-210ENST00000533249 ZBTB8BQ8NAP8 495 aaPredicted RBP16.65■□□□□ 0.26
PKP3-210ENST00000533249 STXBP6Q8NFX7 210 aa16.65■□□□□ 0.26
PKP3-210ENST00000533249 MRPL36Q9P0J6 103 aaKnown RBP16.65■□□□□ 0.26
PKP3-210ENST00000533249 INS-IGF2F8WCM5 200 aa16.64■□□□□ 0.25
PKP3-210ENST00000533249 CORTO00230 105 aa16.64■□□□□ 0.25
PKP3-210ENST00000533249 BCAP31P51572 246 aa16.64■□□□□ 0.25
PKP3-210ENST00000533249 Q6ZRM9 215 aa16.64■□□□□ 0.25
PKP3-210ENST00000533249 OR11H7Q8NGC8 314 aa16.64■□□□□ 0.25
PKP3-210ENST00000533249 AGRNO00468 2067 aa16.64■□□□□ 0.25
PKP3-210ENST00000533249 A0A1W2PS18 150 aa16.63■□□□□ 0.25
PKP3-210ENST00000533249 WRBO00258 174 aa16.63■□□□□ 0.25
PKP3-210ENST00000533249 NXPH3O95157 252 aa16.63■□□□□ 0.25
PKP3-210ENST00000533249 CXCL3P19876 107 aa16.63■□□□□ 0.25
PKP3-210ENST00000533249 OPRK1P41145 380 aa16.63■□□□□ 0.25
PKP3-210ENST00000533249 MLANAQ16655 118 aa16.63■□□□□ 0.25
PKP3-210ENST00000533249 PVRIGQ6DKI7 326 aa16.63■□□□□ 0.25
PKP3-210ENST00000533249 Q8NAQ8 132 aa16.63■□□□□ 0.25
PKP3-210ENST00000533249 METTL26Q96S19 204 aa16.63■□□□□ 0.25
PKP3-210ENST00000533249 FNDC4Q9H6D8 234 aaPredicted RBP16.63■□□□□ 0.25
PKP3-210ENST00000533249 ENY2Q9NPA8 101 aa16.63■□□□□ 0.25
PKP3-210ENST00000533249 IGLL5B9A064 214 aa16.62■□□□□ 0.25
PKP3-210ENST00000533249 K7EQG2 157 aa16.62■□□□□ 0.25
PKP3-210ENST00000533249 CLN5O75503 358 aa16.62■□□□□ 0.25
PKP3-210ENST00000533249 NKX2-1P43699 371 aaPredicted RBP16.62■□□□□ 0.25
PKP3-210ENST00000533249 TRPT1Q86TN4 253 aaKnown RBP16.62■□□□□ 0.25
PKP3-210ENST00000533249 IGHV4-28A0A0C4DH34 117 aa16.61■□□□□ 0.25
PKP3-210ENST00000533249 KNCNA6PVL3 124 aa16.61■□□□□ 0.25
PKP3-210ENST00000533249 CEBPZOSA8MTT3 80 aa16.61■□□□□ 0.25
PKP3-210ENST00000533249 MED6O75586 246 aa16.61■□□□□ 0.25
PKP3-210ENST00000533249 GIG44P09565 113 aaPredicted RBP16.61■□□□□ 0.25
PKP3-210ENST00000533249 ZNF688P0C7X2 276 aa16.61■□□□□ 0.25
PKP3-210ENST00000533249 P2RY1P47900 373 aa16.61■□□□□ 0.25
PKP3-210ENST00000533249 H2BFSP57053 126 aa16.61■□□□□ 0.25
PKP3-210ENST00000533249 TCTAP57738 103 aa16.61■□□□□ 0.25
PKP3-210ENST00000533249 S100A10P60903 97 aa16.61■□□□□ 0.25
PKP3-210ENST00000533249 NMES1Q9C002 83 aa16.61■□□□□ 0.25
PKP3-210ENST00000533249 RBMY1A1P0DJD3 496 aaKnown RBP16.6■□□□□ 0.25
PKP3-210ENST00000533249 RBMY1CP0DJD4 496 aa16.6■□□□□ 0.25
PKP3-210ENST00000533249 CRYBB3P26998 211 aa16.6■□□□□ 0.25
PKP3-210ENST00000533249 SPCS3P61009 180 aa16.6■□□□□ 0.25
PKP3-210ENST00000533249 RBMY1FQ15415 496 aaKnown RBP16.6■□□□□ 0.25
PKP3-210ENST00000533249 TIGITQ495A1 244 aa16.6■□□□□ 0.25
PKP3-210ENST00000533249 OR4X1Q8NH49 305 aa16.6■□□□□ 0.25
PKP3-210ENST00000533249 ASB13Q8WXK3 278 aa16.6■□□□□ 0.25
PKP3-210ENST00000533249 NARS2Q96I59 477 aaKnown RBP16.6■□□□□ 0.25
PKP3-210ENST00000533249 APLNQ9ULZ1 77 aa16.6■□□□□ 0.25
PKP3-210ENST00000533249 VPS13DQ5THJ4 4388 aa16.59■□□□□ 0.25
PKP3-210ENST00000533249 C11orf94C9JXX5 98 aa16.59■□□□□ 0.25
PKP3-210ENST00000533249 FAM90A26D6RGX4 464 aa16.59■□□□□ 0.25
PKP3-210ENST00000533249 SCGB2A1O75556 95 aa16.59■□□□□ 0.25
PKP3-210ENST00000533249 CCNKO75909 580 aa16.59■□□□□ 0.25
PKP3-210ENST00000533249 RLN2P04090 185 aa16.59■□□□□ 0.25
PKP3-210ENST00000533249 GIPP09681 153 aaPredicted RBP16.59■□□□□ 0.25
PKP3-210ENST00000533249 C4BPBP20851 252 aa16.59■□□□□ 0.25
PKP3-210ENST00000533249 RAP2BP61225 183 aa16.59■□□□□ 0.25
PKP3-210ENST00000533249 GRAMD2BQ96HH9 432 aa16.59■□□□□ 0.25
PKP3-210ENST00000533249 LSM5Q9Y4Y9 91 aaKnown RBP16.59■□□□□ 0.25
PKP3-210ENST00000533249 HERC2O95714 4834 aa16.58■□□□□ 0.24
PKP3-210ENST00000533249 PITX3O75364 302 aa16.58■□□□□ 0.24
PKP3-210ENST00000533249 IGKV1-17P01599 117 aa16.58■□□□□ 0.24
PKP3-210ENST00000533249 SPP1P10451 314 aa16.58■□□□□ 0.24
PKP3-210ENST00000533249 HLA-DMBP28068 263 aa16.58■□□□□ 0.24
PKP3-210ENST00000533249 LRRC37A5PQ49AS3 106 aa16.58■□□□□ 0.24
PKP3-210ENST00000533249 TMEM41BQ5BJD5 291 aa16.58■□□□□ 0.24
PKP3-210ENST00000533249 ACTL10Q5JWF8 245 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms