RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 GNG7O60262 68 aa17.01■□□□□ 0.31
PACSIN3-209ENST00000532457 PSMB8P28062 276 aa17.01■□□□□ 0.31
PACSIN3-209ENST00000532457 FCGR2BP31994 310 aaPredicted RBP17.01■□□□□ 0.31
PACSIN3-209ENST00000532457 SELENOTP62341 195 aa17.01■□□□□ 0.31
PACSIN3-209ENST00000532457 KIAA0141Q14154 515 aaPredicted RBP17.01■□□□□ 0.31
PACSIN3-209ENST00000532457 OR4F5Q8NH21 305 aa17.01■□□□□ 0.31
PACSIN3-209ENST00000532457 RAB24Q969Q5 203 aa17.01■□□□□ 0.31
PACSIN3-209ENST00000532457 KCNIP2Q9NS61 270 aa17.01■□□□□ 0.31
PACSIN3-209ENST00000532457 FAM223BA6NKX1 122 aa17■□□□□ 0.31
PACSIN3-209ENST00000532457 SEC14L6B5MCN3 397 aa17■□□□□ 0.31
PACSIN3-209ENST00000532457 FGF8P55075 233 aaPredicted RBP17■□□□□ 0.31
PACSIN3-209ENST00000532457 CLEC19AQ6UXS0 136 aa17■□□□□ 0.31
PACSIN3-209ENST00000532457 FAM223AQ8IWN6 122 aa17■□□□□ 0.31
PACSIN3-209ENST00000532457 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17■□□□□ 0.31
PACSIN3-209ENST00000532457 TXN2Q99757 166 aa17■□□□□ 0.31
PACSIN3-209ENST00000532457 DOK5Q9P104 306 aa17■□□□□ 0.31
PACSIN3-209ENST00000532457 FBN1P35555 2871 aaKnown RBP17■□□□□ 0.31
PACSIN3-209ENST00000532457 KRTAP24-1Q3LI83 254 aa17■□□□□ 0.31
PACSIN3-209ENST00000532457 PFDN2Q9UHV9 154 aa17■□□□□ 0.31
PACSIN3-209ENST00000532457 RD3LP0DJH9 198 aa16.99■□□□□ 0.31
PACSIN3-209ENST00000532457 GPR183P32249 361 aa16.99■□□□□ 0.31
PACSIN3-209ENST00000532457 MORN5Q5VZ52 161 aa16.99■□□□□ 0.31
PACSIN3-209ENST00000532457 EEF1AKMT3Q96AZ1 226 aa16.99■□□□□ 0.31
PACSIN3-209ENST00000532457 ACTR3CQ9C0K3 210 aaPredicted RBP16.99■□□□□ 0.31
PACSIN3-209ENST00000532457 C16orf95Q9H693 158 aa16.99■□□□□ 0.31
PACSIN3-209ENST00000532457 A0A1B0GUS0 222 aa16.98■□□□□ 0.31
PACSIN3-209ENST00000532457 FOXL1Q12952 345 aa16.98■□□□□ 0.31
PACSIN3-209ENST00000532457 DNAJC4Q9NNZ3 241 aa16.98■□□□□ 0.31
PACSIN3-209ENST00000532457 TRAV30A0A087WSZ9 112 aa16.98■□□□□ 0.31
PACSIN3-209ENST00000532457 TRBV7-1A0A0A6YYK4 115 aa16.98■□□□□ 0.31
PACSIN3-209ENST00000532457 TRAV1-1A0A0B4J248 108 aa16.98■□□□□ 0.31
PACSIN3-209ENST00000532457 CTXND1A0A1B0GTU2 59 aa16.98■□□□□ 0.31
PACSIN3-209ENST00000532457 IGHV3-11P01762 117 aa16.98■□□□□ 0.31
PACSIN3-209ENST00000532457 YPEL3P61236 119 aaPredicted RBP16.98■□□□□ 0.31
PACSIN3-209ENST00000532457 SRSF3P84103 164 aaKnown RBP16.98■□□□□ 0.31
PACSIN3-209ENST00000532457 MIR17HGQ75NE6 70 aa16.98■□□□□ 0.31
PACSIN3-209ENST00000532457 MARC2Q969Z3 335 aa16.98■□□□□ 0.31
PACSIN3-209ENST00000532457 SCRT1Q9BWW7 348 aa16.98■□□□□ 0.31
PACSIN3-209ENST00000532457 IGHV3-35A0A0C4DH35 117 aa16.97■□□□□ 0.31
PACSIN3-209ENST00000532457 TRBV12-3P01733 135 aa16.97■□□□□ 0.31
PACSIN3-209ENST00000532457 ORM2P19652 201 aa16.97■□□□□ 0.31
PACSIN3-209ENST00000532457 CDC34P49427 236 aaPredicted RBP16.97■□□□□ 0.31
PACSIN3-209ENST00000532457 USMG5Q96IX5 58 aa16.97■□□□□ 0.31
PACSIN3-209ENST00000532457 UHRF2Q96PU4 802 aa16.97■□□□□ 0.31
PACSIN3-209ENST00000532457 TMPRSS5Q9H3S3 457 aa16.97■□□□□ 0.31
PACSIN3-209ENST00000532457 MAP1LC3B2A6NCE7 125 aa16.96■□□□□ 0.31
PACSIN3-209ENST00000532457 TOMM40O96008 361 aa16.96■□□□□ 0.31
PACSIN3-209ENST00000532457 FAM78BQ5VT40 261 aa16.96■□□□□ 0.31
PACSIN3-209ENST00000532457 ZNF491Q8N8L2 437 aa16.96■□□□□ 0.31
PACSIN3-209ENST00000532457 C19orf24Q9BVV8 132 aa16.96■□□□□ 0.31
PACSIN3-209ENST00000532457 MAP1LC3BQ9GZQ8 125 aa16.96■□□□□ 0.31
PACSIN3-209ENST00000532457 TRAV5A0A0B4J249 113 aa16.96■□□□□ 0.3
PACSIN3-209ENST00000532457 A0A1W2PPV4 95 aa16.96■□□□□ 0.3
PACSIN3-209ENST00000532457 PPP5D1E7EU14 171 aa16.96■□□□□ 0.3
PACSIN3-209ENST00000532457 RPLP1P05386 114 aaKnown RBP16.96■□□□□ 0.3
PACSIN3-209ENST00000532457 OR5G3P0C626 314 aa16.96■□□□□ 0.3
PACSIN3-209ENST00000532457 PLP1P60201 277 aa16.96■□□□□ 0.3
PACSIN3-209ENST00000532457 OR1B1Q8NGR6 318 aa16.96■□□□□ 0.3
PACSIN3-209ENST00000532457 LINC01006Q8NI28 216 aa16.96■□□□□ 0.3
PACSIN3-209ENST00000532457 WI2-2373I1.2A0A1W2PRP0 233 aa16.95■□□□□ 0.3
PACSIN3-209ENST00000532457 TMEM89A2RUT3 159 aa16.95■□□□□ 0.3
PACSIN3-209ENST00000532457 TEX38Q6PEX7 206 aa16.95■□□□□ 0.3
PACSIN3-209ENST00000532457 OR51G1Q8NGK1 321 aa16.95■□□□□ 0.3
PACSIN3-209ENST00000532457 GATAD1Q8WUU5 269 aa16.95■□□□□ 0.3
PACSIN3-209ENST00000532457 FUT9Q9Y231 359 aa16.95■□□□□ 0.3
PACSIN3-209ENST00000532457 CLPSL1A2RUU4 121 aa16.94■□□□□ 0.3
PACSIN3-209ENST00000532457 COX7A2P2O60397 106 aa16.94■□□□□ 0.3
PACSIN3-209ENST00000532457 LYZP61626 148 aa16.94■□□□□ 0.3
PACSIN3-209ENST00000532457 RHOBP62745 196 aa16.94■□□□□ 0.3
PACSIN3-209ENST00000532457 TOR2AQ5JU69 321 aa16.94■□□□□ 0.3
PACSIN3-209ENST00000532457 I3L521 148 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 TGOLN2O43493 480 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 SLC35B1P78383 322 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 FOXE3Q13461 319 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 C10orf113Q5VZT2 155 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 ZNF343Q6P1L6 599 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 MRPL27Q9P0M9 148 aaKnown RBP16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 RNF114Q9Y508 228 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 NUPL2O15504 423 aaKnown RBP16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 HYPMO75409 117 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 STAG3L2P0CL84 134 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 STAG3L3P0CL85 134 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 TCTEX1D4Q5JR98 221 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 HIST2H2BDQ6DRA6 164 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 IL34Q6ZMJ4 242 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 EIF4E3Q8N5X7 224 aaKnown RBP16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 OR4X2Q8NGF9 303 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 MYOZ3Q8TDC0 251 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 ZNF503Q96F45 646 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 OR5B12Q96R08 314 aa16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 PUS1Q9Y606 427 aaKnown RBP eCLIP16.93■□□□□ 0.3
PACSIN3-209ENST00000532457 IGHV3OR16-8A0A075B7F1 116 aa16.92■□□□□ 0.3
PACSIN3-209ENST00000532457 IL4P05112 153 aa16.92■□□□□ 0.3
PACSIN3-209ENST00000532457 USF2Q15853 346 aaPredicted RBP16.92■□□□□ 0.3
PACSIN3-209ENST00000532457 KLHDC1Q8N7A1 406 aa16.92■□□□□ 0.3
PACSIN3-209ENST00000532457 RNF152Q8N8N0 203 aa16.92■□□□□ 0.3
PACSIN3-209ENST00000532457 OR1L4Q8NGR5 311 aa16.92■□□□□ 0.3
PACSIN3-209ENST00000532457 Q8WTZ3 238 aa16.92■□□□□ 0.3
PACSIN3-209ENST00000532457 FAM167A-AS1Q96KT0 104 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms