RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 A0A0D9SG52 128 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 TMEM269A0A1B0GVZ9 245 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 GGT3PA6NGU5 568 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 C1orf196B1AJZ1 125 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 C11orf98E9PRG8 122 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 F5H5P2 479 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 K7ERU9 68 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 CYB5AP00167 134 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 IGHV4-59P01825 116 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 CD37P11049 281 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 CXCL3P19876 107 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 GPR183P32249 361 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 ZNF133P52736 654 aaPredicted RBP3.95□□□□□ -1.78
PABPC1-223ENST00000523636 RPL18AQ02543 176 aaKnown RBP3.95□□□□□ -1.78
PABPC1-223ENST00000523636 CLINT1Q14677 625 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 ACOT6Q3I5F7 207 aaPredicted RBP3.95□□□□□ -1.78
PABPC1-223ENST00000523636 LGALSLQ3ZCW2 172 aaPredicted RBP3.95□□□□□ -1.78
PABPC1-223ENST00000523636 FAM106AQ4KMX7 169 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 HOGA1Q86XE5 327 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 FTMTQ8N4E7 242 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 ORAOV1Q8WV07 137 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 ZNRF4Q8WWF5 429 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 IL22RA2Q969J5 263 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 SLC25A38Q96DW6 304 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 DNAJC30Q96LL9 226 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 GINS4Q9BRT9 223 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 TTTY10Q9BZA0 68 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 FBXL15Q9H469 300 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 PTGES2Q9H7Z7 377 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 COMMD9Q9P000 198 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 KLK11Q9UBX7 282 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 INSIG2Q9Y5U4 225 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 WSB1Q9Y6I7 421 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 SORL1Q92673 2214 aa3.95□□□□□ -1.78
PABPC1-223ENST00000523636 TANC2Q9HCD6 1990 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 TRAV40A0A0B4J280 105 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 IGHV1-18A0A0C4DH31 117 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 A0A1W2PRE2 83 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 C20orf202A1L168 122 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 TMEM218A2RU14 115 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 MAP1LC3B2A6NCE7 125 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 ZNF726A6NNF4 738 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 ZNF736B4DX44 427 aaPredicted RBP3.94□□□□□ -1.78
PABPC1-223ENST00000523636 NPIPB7O75200 414 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 LY6G6CO95867 125 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 CD28P10747 220 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 CD34P28906 385 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 AMTP48728 403 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 DSCR4P56555 118 aaPredicted RBP3.94□□□□□ -1.78
PABPC1-223ENST00000523636 HIST1H3AP68431 136 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 H3F3AP84243 136 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 CYCSP99999 105 aaKnown RBP3.94□□□□□ -1.78
PABPC1-223ENST00000523636 PAX8Q06710 450 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 WDR38Q5JTN6 314 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 C1orf100Q5SVJ3 147 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 HIST2H3AQ71DI3 136 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 LINC01551Q86U37 167 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 ZNF584Q8IVC4 421 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 BAP18Q8IXM2 172 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 PNKDQ8N490 385 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 SLC22A24Q8N4F4 322 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 ZNF439Q8NDP4 499 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 BEST4Q8NFU0 473 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 ZNF519Q8TB69 540 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 SLC25A44Q96H78 314 aaPredicted RBP3.94□□□□□ -1.78
PABPC1-223ENST00000523636 SMIM8Q96KF7 97 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 RARRES2Q99969 163 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 SRXN1Q9BYN0 137 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 MAP1LC3BQ9GZQ8 125 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 MOB1AQ9H8S9 216 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 CARHSP1Q9Y2V2 147 aaKnown RBP3.94□□□□□ -1.78
PABPC1-223ENST00000523636 RBM7Q9Y580 266 aaKnown RBP3.94□□□□□ -1.78
PABPC1-223ENST00000523636 V9GYS6 101 aa3.94□□□□□ -1.78
PABPC1-223ENST00000523636 IGLV1-36A0A0B4J1U3 117 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 IGHV2OR16-5A0A0B4J2B6 119 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 A0A0J9YW62 118 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 LOC102725191A0A1B0GVB3 256 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 ZNF724A8MTY0 619 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 MCRIP1C9JLW8 97 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 F6UB75 175 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 H7C1C5 153 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 IGHG1P01857 330 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 REG1AP05451 166 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 IGKV2-30P06310 120 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 UBBP0CG47 229 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 RND3P61587 244 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 LCN6P62502 163 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 GRB2P62993 217 aaKnown RBP3.93□□□□□ -1.78
PABPC1-223ENST00000523636 SLC35A1P78382 337 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 RUNX1Q01196 453 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 OR7A5Q15622 319 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 TMEM241Q24JQ0 296 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 GLYATL3Q5SZD4 288 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 TEX36Q5VZQ5 186 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 AWAT2Q6E213 333 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 SLC35E4Q6ICL7 350 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 TOMM20LQ6UXN7 152 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 C9orf47Q6ZRZ4 202 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 TMUB2Q71RG4 321 aa3.93□□□□□ -1.78
PABPC1-223ENST00000523636 PDZD9Q8IXQ8 264 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms