RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 IFNA21P01568 189 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 TCRBP04435 133 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 POLR2GP62487 172 aaKnown RBP eCLIP8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 ZNF90Q03938 601 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 Q6ZWC4 215 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 OR51G1Q8NGK1 321 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 GRAMD2BQ96HH9 432 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 NARS2Q96I59 477 aaKnown RBP8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 RABAC1Q9UI14 185 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 PAIP2BQ9ULR5 123 aaKnown RBP8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 RYR3Q15413 4870 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 IGKV1OR2-108A0A075B7D4 117 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 BUB3O43684 328 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 NKX2-1P43699 371 aaPredicted RBP8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 DEFB131AP59861 70 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 RPP30P78346 268 aaKnown RBP8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 SPANXN5Q5MJ07 72 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 ZFAND6Q6FIF0 208 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 THAP8Q8NA92 274 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 STXBP6Q8NFX7 210 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 DCANP1Q8TF63 244 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 RNF125Q96EQ8 232 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 TRGV9Q99603 122 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 TP53TG1Q9Y2A0 90 aa8.56□□□□□ -1.04
SH3RF1-205ENST00000511421 H3BP45 60 aa8.55□□□□□ -1.04
SH3RF1-205ENST00000511421 SPRY2O43597 315 aa8.55□□□□□ -1.04
SH3RF1-205ENST00000511421 DEFB135Q30KP9 77 aa8.55□□□□□ -1.04
SH3RF1-205ENST00000511421 LEMD1Q68G75 181 aa8.55□□□□□ -1.04
SH3RF1-205ENST00000511421 STPG3Q8N7X2 389 aa8.55□□□□□ -1.04
SH3RF1-205ENST00000511421 S100ZQ8WXG8 99 aa8.55□□□□□ -1.04
SH3RF1-205ENST00000511421 RNF183Q96D59 192 aa8.55□□□□□ -1.04
SH3RF1-205ENST00000511421 TBC1D24Q9ULP9 559 aa8.55□□□□□ -1.04
SH3RF1-205ENST00000511421 STRAPQ9Y3F4 350 aaKnown RBP8.55□□□□□ -1.04
SH3RF1-205ENST00000511421 TRAV6A0A075B6T7 132 aa8.54□□□□□ -1.04
SH3RF1-205ENST00000511421 HELTA6NFD8 242 aa8.54□□□□□ -1.04
SH3RF1-205ENST00000511421 PMS2P5A8MQ11 134 aa8.54□□□□□ -1.04
SH3RF1-205ENST00000511421 EIF2B2P49770 351 aaKnown RBP8.54□□□□□ -1.04
SH3RF1-205ENST00000511421 PAX9P55771 341 aa8.54□□□□□ -1.04
SH3RF1-205ENST00000511421 IAH1Q2TAA2 248 aaPredicted RBP8.54□□□□□ -1.04
SH3RF1-205ENST00000511421 SMIM8Q96KF7 97 aa8.54□□□□□ -1.04
SH3RF1-205ENST00000511421 CSTL1Q9H114 145 aa8.54□□□□□ -1.04
SH3RF1-205ENST00000511421 NUDT15Q9NV35 164 aa8.54□□□□□ -1.04
SH3RF1-205ENST00000511421 SACSQ9NZJ4 4579 aa8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 AP2S1P53680 142 aaPredicted RBP8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 OR2F1Q13607 317 aa8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 OR8G2PQ6IF36 304 aa8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 ZBTB8BQ8NAP8 495 aaPredicted RBP8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 PBDC1Q9BVG4 233 aa8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 PSENENQ9NZ42 101 aa8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 TENM2Q9NT68 2774 aa8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 SNRPGP15A8MWD9 76 aa8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 SSSCA1O60232 199 aa8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 FABP1P07148 127 aa8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 ZNF688P0C7X2 276 aa8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 LYZP61626 148 aa8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 TMEM14EPQ6UXP3 125 aa8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 ACOT7LQ6ZUV0 252 aa8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 ZNF431Q8TF32 576 aaPredicted RBP8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 SEC22CQ9BRL7 303 aa8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 RCL1Q9Y2P8 373 aaKnown RBP8.53□□□□□ -1.04
SH3RF1-205ENST00000511421 CCSO14618 274 aa8.52□□□□□ -1.05
SH3RF1-205ENST00000511421 CCNKO75909 580 aa8.52□□□□□ -1.05
SH3RF1-205ENST00000511421 H2AFB2P0C5Z0 115 aa8.52□□□□□ -1.05
SH3RF1-205ENST00000511421 ASAH1Q13510 395 aa8.52□□□□□ -1.05
SH3RF1-205ENST00000511421 SIGLEC15Q6ZMC9 328 aa8.52□□□□□ -1.05
SH3RF1-205ENST00000511421 TMEM182Q6ZP80 229 aaPredicted RBP8.52□□□□□ -1.05
SH3RF1-205ENST00000511421 RAB40CQ96S21 281 aa8.52□□□□□ -1.05
SH3RF1-205ENST00000511421 NRN1Q9NPD7 142 aa8.52□□□□□ -1.05
SH3RF1-205ENST00000511421 PTTG2Q9NZH5 202 aa8.52□□□□□ -1.05
SH3RF1-205ENST00000511421 GSKIPQ9P0R6 139 aa8.52□□□□□ -1.05
SH3RF1-205ENST00000511421 AGRNO00468 2067 aa8.52□□□□□ -1.05
SH3RF1-205ENST00000511421 FAM240BA0A1B0GVZ2 78 aa8.51□□□□□ -1.05
SH3RF1-205ENST00000511421 SCGB1D2O95969 90 aa8.51□□□□□ -1.05
SH3RF1-205ENST00000511421 MBPP02686 304 aaPredicted RBP8.51□□□□□ -1.05
SH3RF1-205ENST00000511421 NUP62P37198 522 aaPredicted RBP8.51□□□□□ -1.05
SH3RF1-205ENST00000511421 TAS2R30P59541 319 aa8.51□□□□□ -1.05
SH3RF1-205ENST00000511421 TMEM144Q7Z5S9 345 aa8.51□□□□□ -1.05
SH3RF1-205ENST00000511421 TRPT1Q86TN4 253 aaKnown RBP8.51□□□□□ -1.05
SH3RF1-205ENST00000511421 IL17DQ8TAD2 202 aa8.51□□□□□ -1.05
SH3RF1-205ENST00000511421 SEPSECSQ9HD40 501 aaKnown RBP8.51□□□□□ -1.05
SH3RF1-205ENST00000511421 A0A0J9YWU9 116 aa8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 KNCNA6PVL3 124 aa8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 UPK1BO75841 260 aa8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 CFDP00746 253 aaPredicted RBP8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 GIG44P09565 113 aaPredicted RBP8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 GATA2P23769 480 aaPredicted RBP8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 IFITM3Q01628 133 aa8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 EWSR1Q01844 656 aaKnown RBP eCLIP8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 AKR1C1Q04828 323 aa8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 ZNF846Q147U1 533 aa8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 C1orf194Q5T5A4 169 aa8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 MZT2BQ6NZ67 158 aa8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 STHQ8IWL8 128 aa8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 C12orf45Q8N5I9 185 aaPredicted RBP8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 WDR12Q9GZL7 423 aaKnown RBP8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 PFDN2Q9UHV9 154 aa8.5□□□□□ -1.05
SH3RF1-205ENST00000511421 C7orf66A4D0T2 115 aa8.49□□□□□ -1.05
SH3RF1-205ENST00000511421 TSC22D2O75157 780 aa8.49□□□□□ -1.05
SH3RF1-205ENST00000511421 CA1P00915 261 aaPredicted RBP8.49□□□□□ -1.05
SH3RF1-205ENST00000511421 METTL15P1P0C7V9 234 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms