RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 SPIN2BQ9BPZ2 258 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 CMSS1Q9BQ75 279 aaKnown RBP4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 GINS3Q9BRX5 216 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 FAM103A1Q9BTL3 118 aaKnown RBP4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 TMEM59Q9BXS4 323 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 SELENOIQ9C0D9 397 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 FBXL15Q9H469 300 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 PLEKHA3Q9HB20 300 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 NIT2Q9NQR4 276 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 ZNF230Q9UIE0 474 aaPredicted RBP4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 TRAPPC2LQ9UL33 140 aa4.88□□□□□ -1.63
TMEM39A-209ENST00000486235 DNAH10Q8IVF4 4471 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 A0A1W2PP11 408 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 C7orf77A4D0Y5 90 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 IZUMO1RA6ND01 250 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 H0Y980 276 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 FCN1O00602 326 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 SPINT2O43291 252 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 HBZP02008 142 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 TRGV3P03979 118 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 DTYMKP23919 212 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 TAGLN2P37802 199 aaKnown RBP4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 RBM11P57052 281 aaKnown RBP4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 SNRPEP62304 92 aaKnown RBP4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 FABP9Q0Z7S8 132 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 PNRC1Q12796 327 aaPredicted RBP4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 CLINT1Q14677 625 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 PLGLAQ15195 96 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 GUK1Q16774 197 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 UNQ5815/PRO19632Q6UWF5 114 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 DHRS11Q6UWP2 260 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 ZNF600Q6ZNG1 722 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 ZNF497Q6ZNH5 498 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 TMEM182Q6ZP80 229 aaPredicted RBP4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 Q6ZRG5 221 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 C5orf24Q7Z6I8 188 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 PPP1R27Q86WC6 154 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 FAM89BQ8N5H3 189 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 CCDC71LQ8N9Z2 235 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 MARCH1Q8TCQ1 289 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 GNPNAT1Q96EK6 184 aaPredicted RBP4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 CYYR1Q96J86 154 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 CLCC1Q96S66 551 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 NABP2Q9BQ15 211 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 TM2D1Q9BX74 207 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 METTL9Q9H1A3 318 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 RPS10P5Q9NQ39 176 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 ZNF355PQ9NSJ1 428 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 TMEM242Q9NWH2 141 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 RNF150Q9ULK6 438 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 GAB2Q9UQC2 676 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 FRAS1Q86XX4 4008 aa4.87□□□□□ -1.63
TMEM39A-209ENST00000486235 MEIS3P1A6NDR6 274 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 CRYM-AS1A6NIL9 109 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 TSTD3H0UI37 97 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 CCSO14618 274 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 NDUFA3O95167 84 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 CDS2O95674 445 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 PPP1CCP36873 323 aaKnown RBP4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 LPAR6P43657 344 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 SULT1A1P50225 295 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 CRIP2P52943 208 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 SYNJ2BPP57105 145 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 LINC00205P59089 165 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 BAXQ07812 192 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 TMEM267Q0VDI3 215 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 UNC119Q13432 240 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 ARFRP1Q13795 201 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 IAH1Q2TAA2 248 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 SLC22A6Q4U2R8 563 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 MORN2Q502X0 79 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 ASCL4Q6XD76 172 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 PQLC2Q6ZP29 291 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 FAM219AQ8IW50 185 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 ODF3L1Q8IXM7 274 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 RPP25LQ8N5L8 163 aaKnown RBP4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 TCTEX1D1Q8N7M0 179 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 NRACQ8N912 160 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 NPBQ8NG41 125 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 OR9G4Q8NGQ1 327 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 PRSS3P2Q8NHM4 247 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 MRGPRFQ96AM1 343 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 PFDN5Q99471 154 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 SLC25A31Q9H0C2 315 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 LPAR5Q9H1C0 372 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 WFDC10AQ9H1F0 79 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 C5orf66Q9H5L9 145 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 OR2S2Q9NQN1 319 aa4.86□□□□□ -1.63
TMEM39A-209ENST00000486235 IGKV2D-30A0A075B6S6 120 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 SAA2-SAA4A0A096LPE2 208 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 LINC00587B1AMM8 73 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 M0R036 132 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 VCYO14598 125 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 RRHO14718 337 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 HMGB3O15347 200 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 SAA2P0DJI9 122 aaPredicted RBP4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 FCGR2CP31995 323 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 PPT1P50897 306 aa4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 SUPT4H1P63272 117 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-209ENST00000486235 DLK1P80370 383 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms