RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 KNCNA6PVL3 124 aa10.52□□□□□ -0.73
SMARCE1-209ENST00000478349 ZNF705EA8MWA4 302 aaPredicted RBP10.52□□□□□ -0.73
SMARCE1-209ENST00000478349 DEFB4AO15263 64 aa10.52□□□□□ -0.73
SMARCE1-209ENST00000478349 AKR1C4P17516 323 aa10.52□□□□□ -0.73
SMARCE1-209ENST00000478349 SAMD13Q5VXD3 122 aa10.52□□□□□ -0.73
SMARCE1-209ENST00000478349 OR51G1Q8NGK1 321 aa10.52□□□□□ -0.73
SMARCE1-209ENST00000478349 SLC35E1Q96K37 410 aa10.52□□□□□ -0.73
SMARCE1-209ENST00000478349 HSPB7Q9UBY9 170 aa10.52□□□□□ -0.73
SMARCE1-209ENST00000478349 BIRC6Q9NR09 4857 aa10.52□□□□□ -0.73
SMARCE1-209ENST00000478349 DUXBA0A1W2PPF3 345 aa10.51□□□□□ -0.73
SMARCE1-209ENST00000478349 ZFP92A6NM28 416 aa10.51□□□□□ -0.73
SMARCE1-209ENST00000478349 IGLL5B9A064 214 aa10.51□□□□□ -0.73
SMARCE1-209ENST00000478349 FAM90A26D6RGX4 464 aa10.51□□□□□ -0.73
SMARCE1-209ENST00000478349 ID1P41134 155 aa10.51□□□□□ -0.73
SMARCE1-209ENST00000478349 KLF9Q13886 244 aaPredicted RBP10.51□□□□□ -0.73
SMARCE1-209ENST00000478349 USF2Q15853 346 aaPredicted RBP10.51□□□□□ -0.73
SMARCE1-209ENST00000478349 RPP25LQ8N5L8 163 aaKnown RBP10.51□□□□□ -0.73
SMARCE1-209ENST00000478349 OR1S1Q8NH92 325 aa10.51□□□□□ -0.73
SMARCE1-209ENST00000478349 RNF125Q96EQ8 232 aa10.51□□□□□ -0.73
SMARCE1-209ENST00000478349 RAB40CQ96S21 281 aa10.51□□□□□ -0.73
SMARCE1-209ENST00000478349 BUB3O43684 328 aa10.5□□□□□ -0.73
SMARCE1-209ENST00000478349 DEDDO75618 318 aa10.5□□□□□ -0.73
SMARCE1-209ENST00000478349 NXPH3O95157 252 aa10.5□□□□□ -0.73
SMARCE1-209ENST00000478349 C4BPBP20851 252 aa10.5□□□□□ -0.73
SMARCE1-209ENST00000478349 S100A7P31151 101 aa10.5□□□□□ -0.73
SMARCE1-209ENST00000478349 GPX4P36969 197 aaPredicted RBP10.5□□□□□ -0.73
SMARCE1-209ENST00000478349 RAB11AP62491 216 aa10.5□□□□□ -0.73
SMARCE1-209ENST00000478349 RPP30P78346 268 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-209ENST00000478349 DYNC2LI1Q8TCX1 351 aa10.5□□□□□ -0.73
SMARCE1-209ENST00000478349 PBDC1Q9BVG4 233 aa10.5□□□□□ -0.73
SMARCE1-209ENST00000478349 FABP12A6NFH5 140 aa10.49□□□□□ -0.73
SMARCE1-209ENST00000478349 MED6O75586 246 aa10.49□□□□□ -0.73
SMARCE1-209ENST00000478349 PSG1P11464 419 aa10.49□□□□□ -0.73
SMARCE1-209ENST00000478349 HLA-DMBP28068 263 aa10.49□□□□□ -0.73
SMARCE1-209ENST00000478349 NKX2-1P43699 371 aaPredicted RBP10.49□□□□□ -0.73
SMARCE1-209ENST00000478349 C1orf194Q5T5A4 169 aa10.49□□□□□ -0.73
SMARCE1-209ENST00000478349 COQ8AQ8NI60 647 aa10.49□□□□□ -0.73
SMARCE1-209ENST00000478349 DEDD2Q8WXF8 326 aa10.49□□□□□ -0.73
SMARCE1-209ENST00000478349 TEX48A0A1B0GUV7 120 aa10.48□□□□□ -0.73
SMARCE1-209ENST00000478349 TMEM189A5PLL7 270 aa10.48□□□□□ -0.73
SMARCE1-209ENST00000478349 CFDP00746 253 aaPredicted RBP10.48□□□□□ -0.73
SMARCE1-209ENST00000478349 GIG44P09565 113 aaPredicted RBP10.48□□□□□ -0.73
SMARCE1-209ENST00000478349 SPATA31B1PQ5VZV4 182 aa10.48□□□□□ -0.73
SMARCE1-209ENST00000478349 PPP1R14BQ96C90 147 aa10.48□□□□□ -0.73
SMARCE1-209ENST00000478349 CIB3Q96Q77 187 aaPredicted RBP10.48□□□□□ -0.73
SMARCE1-209ENST00000478349 RNF126Q9BV68 326 aa10.48□□□□□ -0.73
SMARCE1-209ENST00000478349 RBKSQ9H477 322 aa10.48□□□□□ -0.73
SMARCE1-209ENST00000478349 SNRPGP15A8MWD9 76 aa10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 H3BMM0 161 aa10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 RBMY1A1P0DJD3 496 aaKnown RBP10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 RBMY1CP0DJD4 496 aa10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 HLA-DRB4P13762 266 aa10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 PSMB3P49720 205 aa10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 MEOX2P50222 304 aa10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 SUPT4H1P63272 117 aaKnown RBP10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 RBMY1FQ15415 496 aaKnown RBP10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 TMEM128Q5BJH2 165 aa10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 LYZL2Q7Z4W2 148 aa10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 TOMM5Q8N4H5 51 aa10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 MCFD2Q8NI22 146 aa10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 TMEM170AQ8WVE7 144 aa10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 CLEC5AQ9NY25 188 aa10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 HLA-DRB4X5D2U9 266 aa10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 X6R8D5 127 aa10.47□□□□□ -0.73
SMARCE1-209ENST00000478349 SMIM9A6NGZ8 99 aa10.46□□□□□ -0.73
SMARCE1-209ENST00000478349 SLC25A6P12236 298 aa10.46□□□□□ -0.73
SMARCE1-209ENST00000478349 VAMP1P23763 118 aa10.46□□□□□ -0.73
SMARCE1-209ENST00000478349 LYZP61626 148 aa10.46□□□□□ -0.73
SMARCE1-209ENST00000478349 Q6ZTC4 211 aa10.46□□□□□ -0.73
SMARCE1-209ENST00000478349 TMED4Q7Z7H5 227 aa10.46□□□□□ -0.73
SMARCE1-209ENST00000478349 CSNK1G2-AS1Q8NCQ2 148 aa10.46□□□□□ -0.73
SMARCE1-209ENST00000478349 SLC25A21Q9BQT8 299 aaPredicted RBP10.46□□□□□ -0.73
SMARCE1-209ENST00000478349 XCL2Q9UBD3 114 aa10.46□□□□□ -0.73
SMARCE1-209ENST00000478349 PAIP2BQ9ULR5 123 aaKnown RBP10.46□□□□□ -0.73
SMARCE1-209ENST00000478349 APLNQ9ULZ1 77 aa10.46□□□□□ -0.73
SMARCE1-209ENST00000478349 HYDINQ4G0P3 5121 aa10.46□□□□□ -0.74
SMARCE1-209ENST00000478349 IGHV4-4A0A075B6R2 117 aa10.45□□□□□ -0.74
SMARCE1-209ENST00000478349 AMBPP02760 352 aa10.45□□□□□ -0.74
SMARCE1-209ENST00000478349 TNFSF8P32971 234 aa10.45□□□□□ -0.74
SMARCE1-209ENST00000478349 S100A5P33763 92 aa10.45□□□□□ -0.74
SMARCE1-209ENST00000478349 GAMTQ14353 236 aa10.45□□□□□ -0.74
SMARCE1-209ENST00000478349 PYDC2Q56P42 97 aa10.45□□□□□ -0.74
SMARCE1-209ENST00000478349 GGNBP1Q5YKI7 109 aa10.45□□□□□ -0.74
SMARCE1-209ENST00000478349 FOXI2Q6ZQN5 318 aa10.45□□□□□ -0.74
SMARCE1-209ENST00000478349 NEU1Q99519 415 aa10.45□□□□□ -0.74
SMARCE1-209ENST00000478349 TRGV9Q99603 122 aa10.45□□□□□ -0.74
SMARCE1-209ENST00000478349 SLIRPQ9GZT3 109 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-209ENST00000478349 PRR13Q9NZ81 148 aa10.45□□□□□ -0.74
SMARCE1-209ENST00000478349 TMED3Q9Y3Q3 217 aa10.45□□□□□ -0.74
SMARCE1-209ENST00000478349 DEFB131BA0A096LNP1 70 aa10.44□□□□□ -0.74
SMARCE1-209ENST00000478349 H3BMQ9 156 aa10.44□□□□□ -0.74
SMARCE1-209ENST00000478349 ISLRO14498 428 aa10.44□□□□□ -0.74
SMARCE1-209ENST00000478349 GALR1P47211 349 aa10.44□□□□□ -0.74
SMARCE1-209ENST00000478349 EBLN2Q6P2I7 272 aa10.44□□□□□ -0.74
SMARCE1-209ENST00000478349 OR8I2Q8N0Y5 310 aa10.44□□□□□ -0.74
SMARCE1-209ENST00000478349 LINC00052Q96N35 136 aa10.44□□□□□ -0.74
SMARCE1-209ENST00000478349 CLUHP3Q96NS8 147 aa10.44□□□□□ -0.74
SMARCE1-209ENST00000478349 NDUFAF3Q9BU61 184 aa10.44□□□□□ -0.74
SMARCE1-209ENST00000478349 SLC45A2Q9UMX9 530 aa10.44□□□□□ -0.74
SMARCE1-209ENST00000478349 ELOA3CA0A087WX78 387 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms