RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 H3BUX3 64 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 RBFOX2O43251 390 aaKnown RBP eCLIP2.71□□□□□ -1.98
UBR3-209ENST00000477461 SNAPC5O75971 98 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 S1PR2O95136 353 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 MOSP00540 346 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 KRASP01116 189 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 IFNA21P01568 189 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 IGKV1D-33P01593 117 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 IGKV1-33P01594 117 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 NQO2P16083 231 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 SPNP16150 400 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 PAX6P26367 422 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 LGALS7P47929 136 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 CAMLGP49069 296 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 DYNLT3P51808 116 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 RPL30P62888 115 aaKnown RBP2.71□□□□□ -1.98
UBR3-209ENST00000477461 DHRS2Q13268 280 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 OXA1LQ15070 435 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 MMDQ15546 238 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 LY6EQ16553 131 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 AANATQ16613 207 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 TATDN3Q17R31 274 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 DEFB112Q30KQ8 113 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 SP6Q3SY56 376 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 THOC7Q6I9Y2 204 aaKnown RBP2.71□□□□□ -1.98
UBR3-209ENST00000477461 SSX9Q7RTT3 188 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 H2BFWTQ7Z2G1 175 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 DYNAPQ8N1N2 210 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 C12orf45Q8N5I9 185 aaPredicted RBP2.71□□□□□ -1.98
UBR3-209ENST00000477461 SIGLECL1Q8N7X8 197 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 VSTM2AQ8TAG5 236 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 ZNF431Q8TF32 576 aaPredicted RBP2.71□□□□□ -1.98
UBR3-209ENST00000477461 C17orf50Q8WW18 174 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 RBPMSQ93062 196 aaKnown RBP2.71□□□□□ -1.98
UBR3-209ENST00000477461 TMEM230Q96A57 120 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 MRGPRFQ96AM1 343 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 GALNT14Q96FL9 552 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 TP53RKQ96S44 253 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 SPIN2AQ99865 258 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 RNF5Q99942 180 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 SPIN2BQ9BPZ2 258 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 SEC22CQ9BRL7 303 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 MARVELD1Q9BSK0 173 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 PDCD10Q9BUL8 212 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 TMEM222Q9H0R3 208 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 MED28Q9H204 178 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 RAB18Q9NP72 206 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 COMMD9Q9P000 198 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 APCP25054 2843 aa2.71□□□□□ -1.98
UBR3-209ENST00000477461 SMG1Q96Q15 3661 aaKnown RBP2.7□□□□□ -1.98
UBR3-209ENST00000477461 ITPR3Q14573 2671 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 ACANP16112 2415 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 FLNAP21333 2647 aaKnown RBP2.7□□□□□ -1.98
UBR3-209ENST00000477461 F8P00451 2351 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 A0A0B4J2A0 478 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 MDFIC2A0A1B0GVS7 189 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 DUXBA0A1W2PPF3 345 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 C7orf66A4D0T2 115 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 VGLL3A8MV65 326 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 FAM25EA8MYX2 175 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 M0QZK8 103 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 WRBO00258 174 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 GOSR2O14653 212 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 NBR2O15453 112 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 RAMP3O60896 148 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 CDS2O95674 445 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 CRYBA1P05813 215 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 VDAC1P21796 283 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 CD24P25063 80 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 G6PCP35575 357 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 SUPT4H1P63272 117 aaKnown RBP2.7□□□□□ -1.98
UBR3-209ENST00000477461 EIF4EBP1Q13541 118 aaPredicted RBP2.7□□□□□ -1.98
UBR3-209ENST00000477461 EBI3Q14213 229 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 PSG5Q15238 335 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 LDLRAD2Q5SZI1 272 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 SELENOHQ8IZQ5 122 aaKnown RBP2.7□□□□□ -1.98
UBR3-209ENST00000477461 TMEM86BQ8N661 226 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 SLC35G3Q8N808 338 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 OR52B4Q8NGK2 314 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 OR1S1Q8NH92 325 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 GLYATL2Q8WU03 294 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 MITD1Q8WV92 249 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 IL22RA2Q969J5 263 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 LSM10Q969L4 123 aaKnown RBP2.7□□□□□ -1.98
UBR3-209ENST00000477461 PINX1Q96BK5 328 aaKnown RBP2.7□□□□□ -1.98
UBR3-209ENST00000477461 TMEM56Q96MV1 263 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 CLCC1Q96S66 551 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 RASL11BQ9BPW5 248 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 OR51J1Q9H342 316 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 FBXL15Q9H469 300 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 TMEM231Q9H6L2 316 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 RANBP3Q9H6Z4 567 aaPredicted RBP2.7□□□□□ -1.98
UBR3-209ENST00000477461 ENY2Q9NPA8 101 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 FKBP11Q9NYL4 201 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 METTL1Q9UBP6 276 aaKnown RBP2.7□□□□□ -1.98
UBR3-209ENST00000477461 SHPKQ9UHJ6 478 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 VPREB3Q9UKI3 123 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 SOX21Q9Y651 276 aaPredicted RBP2.7□□□□□ -1.98
UBR3-209ENST00000477461 ALG5Q9Y673 324 aa2.7□□□□□ -1.98
UBR3-209ENST00000477461 TMEM56-RWDD3S4R434 201 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms