RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CTSGP08311 255 aa22.39■■□□□ 1.18
VEGFA-211ENST00000476772 ORM2P19652 201 aa22.39■■□□□ 1.18
VEGFA-211ENST00000476772 YPEL3P61236 119 aaPredicted RBP22.39■■□□□ 1.18
VEGFA-211ENST00000476772 MIR17HGQ75NE6 70 aa22.39■■□□□ 1.18
VEGFA-211ENST00000476772 OR1B1Q8NGR6 318 aa22.39■■□□□ 1.18
VEGFA-211ENST00000476772 GATAD1Q8WUU5 269 aa22.39■■□□□ 1.18
VEGFA-211ENST00000476772 PFDN5Q99471 154 aa22.39■■□□□ 1.18
VEGFA-211ENST00000476772 CHRDL1Q9BU40 450 aa22.39■■□□□ 1.18
VEGFA-211ENST00000476772 FUT9Q9Y231 359 aa22.39■■□□□ 1.18
VEGFA-211ENST00000476772 MTORP42345 2549 aa22.39■■□□□ 1.18
VEGFA-211ENST00000476772 HILS1P60008 231 aa22.39■■□□□ 1.17
VEGFA-211ENST00000476772 SRSF3P84103 164 aaKnown RBP22.39■■□□□ 1.17
VEGFA-211ENST00000476772 CLEC19AQ6UXS0 136 aa22.39■■□□□ 1.17
VEGFA-211ENST00000476772 HIVEP1P15822 2718 aa22.38■■□□□ 1.17
VEGFA-211ENST00000476772 CUBNO60494 3623 aa22.38■■□□□ 1.17
VEGFA-211ENST00000476772 SCGB2A1O75556 95 aa22.38■■□□□ 1.17
VEGFA-211ENST00000476772 CLEC3BP05452 202 aa22.38■■□□□ 1.17
VEGFA-211ENST00000476772 RNASE1P07998 156 aaKnown RBP22.38■■□□□ 1.17
VEGFA-211ENST00000476772 PSMB8P28062 276 aa22.38■■□□□ 1.17
VEGFA-211ENST00000476772 ADMP35318 185 aa22.38■■□□□ 1.17
VEGFA-211ENST00000476772 RAB9AP51151 201 aa22.38■■□□□ 1.17
VEGFA-211ENST00000476772 PLP1P60201 277 aa22.38■■□□□ 1.17
VEGFA-211ENST00000476772 LYZP61626 148 aa22.38■■□□□ 1.17
VEGFA-211ENST00000476772 C10orf113Q5VZT2 155 aa22.38■■□□□ 1.17
VEGFA-211ENST00000476772 USMG5Q96IX5 58 aa22.38■■□□□ 1.17
VEGFA-211ENST00000476772 FAM210AQ96ND0 272 aa22.38■■□□□ 1.17
VEGFA-211ENST00000476772 SERTAD4Q9NUC0 356 aa22.38■■□□□ 1.17
VEGFA-211ENST00000476772 CYSRT1A8MQ03 144 aa22.37■■□□□ 1.17
VEGFA-211ENST00000476772 STAG3L2P0CL84 134 aa22.37■■□□□ 1.17
VEGFA-211ENST00000476772 STAG3L3P0CL85 134 aa22.37■■□□□ 1.17
VEGFA-211ENST00000476772 Q6ZSV7 163 aa22.37■■□□□ 1.17
VEGFA-211ENST00000476772 OR51G1Q8NGK1 321 aa22.37■■□□□ 1.17
VEGFA-211ENST00000476772 TMPRSS5Q9H3S3 457 aa22.37■■□□□ 1.17
VEGFA-211ENST00000476772 GAR1Q9NY12 217 aaKnown RBP22.37■■□□□ 1.17
VEGFA-211ENST00000476772 NUPL2O15504 423 aaKnown RBP22.36■■□□□ 1.17
VEGFA-211ENST00000476772 UHRF2Q96PU4 802 aa22.36■■□□□ 1.17
VEGFA-211ENST00000476772 TMEM231Q9H6L2 316 aa22.36■■□□□ 1.17
VEGFA-211ENST00000476772 SLC35B1P78383 322 aa22.36■■□□□ 1.17
VEGFA-211ENST00000476772 MORN5Q5VZ52 161 aa22.36■■□□□ 1.17
VEGFA-211ENST00000476772 RNF2Q99496 336 aa22.36■■□□□ 1.17
VEGFA-211ENST00000476772 SCRT1Q9BWW7 348 aa22.36■■□□□ 1.17
VEGFA-211ENST00000476772 MRPL32Q9BYC8 188 aaKnown RBP22.36■■□□□ 1.17
VEGFA-211ENST00000476772 ELOA3CA0A087WX78 387 aaPredicted RBP22.35■■□□□ 1.17
VEGFA-211ENST00000476772 TMEM89A2RUT3 159 aa22.35■■□□□ 1.17
VEGFA-211ENST00000476772 HYPMO75409 117 aa22.35■■□□□ 1.17
VEGFA-211ENST00000476772 GUK1Q16774 197 aa22.35■■□□□ 1.17
VEGFA-211ENST00000476772 TOR2AQ5JU69 321 aa22.35■■□□□ 1.17
VEGFA-211ENST00000476772 IQCF2Q8IXL9 164 aa22.35■■□□□ 1.17
VEGFA-211ENST00000476772 PBDC1Q9BVG4 233 aa22.35■■□□□ 1.17
VEGFA-211ENST00000476772 TGOLN2O43493 480 aa22.34■■□□□ 1.17
VEGFA-211ENST00000476772 IGHV3-11P01762 117 aa22.34■■□□□ 1.17
VEGFA-211ENST00000476772 ARL14EPLP0DKL9 152 aa22.34■■□□□ 1.17
VEGFA-211ENST00000476772 ZNF491Q8N8L2 437 aa22.34■■□□□ 1.17
VEGFA-211ENST00000476772 Q8WTZ3 238 aa22.34■■□□□ 1.17
VEGFA-211ENST00000476772 GNG13Q9P2W3 67 aa22.34■■□□□ 1.17
VEGFA-211ENST00000476772 IL4P05112 153 aa22.33■■□□□ 1.17
VEGFA-211ENST00000476772 UQCC3Q6UW78 93 aa22.33■■□□□ 1.17
VEGFA-211ENST00000476772 LINC00305Q7Z4B0 112 aa22.33■■□□□ 1.17
VEGFA-211ENST00000476772 RNF125Q96EQ8 232 aa22.33■■□□□ 1.17
VEGFA-211ENST00000476772 ATP6V0BQ99437 205 aa22.33■■□□□ 1.17
VEGFA-211ENST00000476772 GNB4Q9HAV0 340 aa22.33■■□□□ 1.17
VEGFA-211ENST00000476772 A0A0G2JLM5 398 aa22.33■■□□□ 1.16
VEGFA-211ENST00000476772 WI2-2373I1.2A0A1W2PRP0 233 aa22.33■■□□□ 1.16
VEGFA-211ENST00000476772 HAGHQ16775 308 aa22.33■■□□□ 1.16
VEGFA-211ENST00000476772 TEX38Q6PEX7 206 aa22.33■■□□□ 1.16
VEGFA-211ENST00000476772 ZNF414Q96IQ9 312 aa22.33■■□□□ 1.16
VEGFA-211ENST00000476772 EIF5A2Q9GZV4 153 aaKnown RBP22.33■■□□□ 1.16
VEGFA-211ENST00000476772 TECRQ9NZ01 308 aaKnown RBP22.33■■□□□ 1.16
VEGFA-211ENST00000476772 TRAV5A0A0B4J249 113 aa22.32■■□□□ 1.16
VEGFA-211ENST00000476772 I3L521 148 aa22.32■■□□□ 1.16
VEGFA-211ENST00000476772 OR2C1O95371 312 aa22.32■■□□□ 1.16
VEGFA-211ENST00000476772 CXorf1O96002 111 aa22.32■■□□□ 1.16
VEGFA-211ENST00000476772 RARRES2Q99969 163 aa22.32■■□□□ 1.16
VEGFA-211ENST00000476772 HIGD1AQ9Y241 93 aa22.32■■□□□ 1.16
VEGFA-211ENST00000476772 IGHV3-35A0A0C4DH35 117 aa22.31■■□□□ 1.16
VEGFA-211ENST00000476772 RBFOX3A6NFN3 312 aa22.31■■□□□ 1.16
VEGFA-211ENST00000476772 PPP5D1E7EU14 171 aa22.31■■□□□ 1.16
VEGFA-211ENST00000476772 CRYBA1P05813 215 aa22.31■■□□□ 1.16
VEGFA-211ENST00000476772 C8orf88P0DMB2 117 aa22.31■■□□□ 1.16
VEGFA-211ENST00000476772 RPL15P61313 204 aaKnown RBP22.31■■□□□ 1.16
VEGFA-211ENST00000476772 FOXE3Q13461 319 aa22.31■■□□□ 1.16
VEGFA-211ENST00000476772 TREM1Q9NP99 234 aa22.31■■□□□ 1.16
VEGFA-211ENST00000476772 PUS1Q9Y606 427 aaKnown RBP eCLIP22.31■■□□□ 1.16
VEGFA-211ENST00000476772 CD5P06127 495 aa22.3■■□□□ 1.16
VEGFA-211ENST00000476772 TAS2R45P59539 299 aa22.3■■□□□ 1.16
VEGFA-211ENST00000476772 ZNF600Q6ZNG1 722 aa22.3■■□□□ 1.16
VEGFA-211ENST00000476772 SLC25A2Q9BXI2 301 aa22.3■■□□□ 1.16
VEGFA-211ENST00000476772 MRPL27Q9P0M9 148 aaKnown RBP22.3■■□□□ 1.16
VEGFA-211ENST00000476772 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP22.3■■□□□ 1.16
VEGFA-211ENST00000476772 TRBV12-3P01733 135 aa22.3■■□□□ 1.16
VEGFA-211ENST00000476772 RPLP1P05386 114 aaKnown RBP22.3■■□□□ 1.16
VEGFA-211ENST00000476772 ELANEP08246 267 aa22.3■■□□□ 1.16
VEGFA-211ENST00000476772 KIAA0141Q14154 515 aaPredicted RBP22.3■■□□□ 1.16
VEGFA-211ENST00000476772 USF2Q15853 346 aaPredicted RBP22.3■■□□□ 1.16
VEGFA-211ENST00000476772 KHDC3LQ587J8 217 aa22.3■■□□□ 1.16
VEGFA-211ENST00000476772 FAM167A-AS1Q96KT0 104 aa22.3■■□□□ 1.16
VEGFA-211ENST00000476772 JMJD8Q96S16 334 aa22.3■■□□□ 1.16
VEGFA-211ENST00000476772 ZNF343Q6P1L6 599 aa22.29■■□□□ 1.16
VEGFA-211ENST00000476772 OR4X2Q8NGF9 303 aa22.29■■□□□ 1.16
VEGFA-211ENST00000476772 ZNF503Q96F45 646 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms