RNA–Protein interactions for RNA: ENST00000475240.5

ABCD4-208, Transcript of ATP binding cassette subfamily D member 4, human

TSL 5

Gene ABCD4, Length 546 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-208	ENST00000475240	FAM90A26	D6RGX4	464 aa		13.97	□□□□□ -0.17
ABCD4-208	ENST00000475240	BUB3	O43684	328 aa		13.97	□□□□□ -0.17
ABCD4-208	ENST00000475240	ATP5I	P56385	69 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCD4-208	ENST00000475240	KLF9	Q13886	244 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCD4-208	ENST00000475240	LGALS9C	Q6DKI2	356 aa		13.97	□□□□□ -0.17
ABCD4-208	ENST00000475240	TRIM63	Q969Q1	353 aa		13.97	□□□□□ -0.17
ABCD4-208	ENST00000475240	RNF125	Q96EQ8	232 aa		13.97	□□□□□ -0.17
ABCD4-208	ENST00000475240	SLC35E1	Q96K37	410 aa		13.97	□□□□□ -0.17
ABCD4-208	ENST00000475240	RAB40C	Q96S21	281 aa		13.97	□□□□□ -0.17
ABCD4-208	ENST00000475240	PBDC1	Q9BVG4	233 aa		13.97	□□□□□ -0.17
ABCD4-208	ENST00000475240	ZFP92	A6NM28	416 aa		13.96	□□□□□ -0.17
ABCD4-208	ENST00000475240	MIF	P14174	115 aa		13.96	□□□□□ -0.17
ABCD4-208	ENST00000475240	NUP62	P37198	522 aa	Predicted RBP	13.96	□□□□□ -0.17
ABCD4-208	ENST00000475240	TOMM5	Q8N4H5	51 aa		13.96	□□□□□ -0.17
ABCD4-208	ENST00000475240	RPP25L	Q8N5L8	163 aa	Known RBP	13.96	□□□□□ -0.17
ABCD4-208	ENST00000475240	C2CD4C	Q8TF44	421 aa		13.96	□□□□□ -0.17
ABCD4-208	ENST00000475240	CLEC5A	Q9NY25	188 aa		13.96	□□□□□ -0.17
ABCD4-208	ENST00000475240	DUXB	A0A1W2PPF3	345 aa		13.95	□□□□□ -0.18
ABCD4-208	ENST00000475240	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCD4-208	ENST00000475240	RBMY1A1	P0DJD3	496 aa	Known RBP	13.95	□□□□□ -0.18
ABCD4-208	ENST00000475240	RBMY1C	P0DJD4	496 aa		13.95	□□□□□ -0.18
ABCD4-208	ENST00000475240	VAMP1	P23763	118 aa		13.95	□□□□□ -0.18
ABCD4-208	ENST00000475240	GPX4	P36969	197 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCD4-208	ENST00000475240	RBMY1F	Q15415	496 aa	Known RBP	13.95	□□□□□ -0.18
ABCD4-208	ENST00000475240	TMEM128	Q5BJH2	165 aa		13.95	□□□□□ -0.18
ABCD4-208	ENST00000475240	HRH4	Q9H3N8	390 aa		13.95	□□□□□ -0.18
ABCD4-208	ENST00000475240	PFDN2	Q9UHV9	154 aa		13.95	□□□□□ -0.18
ABCD4-208	ENST00000475240	TBC1D24	Q9ULP9	559 aa		13.95	□□□□□ -0.18
ABCD4-208	ENST00000475240	DEDD	O75618	318 aa		13.94	□□□□□ -0.18
ABCD4-208	ENST00000475240	FABP1	P07148	127 aa		13.94	□□□□□ -0.18
ABCD4-208	ENST00000475240	GAMT	Q14353	236 aa		13.94	□□□□□ -0.18
ABCD4-208	ENST00000475240	OR8G2P	Q6IF36	304 aa		13.94	□□□□□ -0.18
ABCD4-208	ENST00000475240	SEPSECS	Q9HD40	501 aa	Known RBP	13.94	□□□□□ -0.18
ABCD4-208	ENST00000475240		V9GYH0	126 aa		13.94	□□□□□ -0.18
ABCD4-208	ENST00000475240		X6R8D5	127 aa		13.94	□□□□□ -0.18
ABCD4-208	ENST00000475240	CCDC160	A6NGH7	325 aa		13.93	□□□□□ -0.18
ABCD4-208	ENST00000475240	C11orf94	C9JXX5	98 aa		13.93	□□□□□ -0.18
ABCD4-208	ENST00000475240	IAPP	P10997	89 aa		13.93	□□□□□ -0.18
ABCD4-208	ENST00000475240	NUTF2	P61970	127 aa	Known RBP	13.93	□□□□□ -0.18
ABCD4-208	ENST00000475240	ZNF90	Q03938	601 aa		13.93	□□□□□ -0.18
ABCD4-208	ENST00000475240	CENPS	Q8N2Z9	138 aa		13.93	□□□□□ -0.18
ABCD4-208	ENST00000475240	C1QTNF4	Q9BXJ3	329 aa		13.93	□□□□□ -0.18
ABCD4-208	ENST00000475240	PAIP2B	Q9ULR5	123 aa	Known RBP	13.93	□□□□□ -0.18
ABCD4-208	ENST00000475240	PITX3	O75364	302 aa		13.92	□□□□□ -0.18
ABCD4-208	ENST00000475240	S100A5	P33763	92 aa		13.92	□□□□□ -0.18
ABCD4-208	ENST00000475240	TCTA	P57738	103 aa		13.92	□□□□□ -0.18
ABCD4-208	ENST00000475240	LYZ	P61626	148 aa		13.92	□□□□□ -0.18
ABCD4-208	ENST00000475240	RAB11A	P62491	216 aa		13.92	□□□□□ -0.18
ABCD4-208	ENST00000475240	CSNK1G2-AS1	Q8NCQ2	148 aa		13.92	□□□□□ -0.18
ABCD4-208	ENST00000475240	SLC25A21	Q9BQT8	299 aa	Predicted RBP	13.92	□□□□□ -0.18
ABCD4-208	ENST00000475240	IGKV1D-37	A0A075B6S9	117 aa		13.91	□□□□□ -0.18
ABCD4-208	ENST00000475240	IGLL5	B9A064	214 aa		13.91	□□□□□ -0.18
ABCD4-208	ENST00000475240	HLA-DMB	P28068	263 aa		13.91	□□□□□ -0.18
ABCD4-208	ENST00000475240	ZNF79	Q15937	498 aa		13.91	□□□□□ -0.18
ABCD4-208	ENST00000475240	LRTM2	Q8N967	370 aa		13.91	□□□□□ -0.18
ABCD4-208	ENST00000475240	XCL2	Q9UBD3	114 aa		13.91	□□□□□ -0.18
ABCD4-208	ENST00000475240		H3BMM0	161 aa		13.9	□□□□□ -0.18
ABCD4-208	ENST00000475240	MED6	O75586	246 aa		13.9	□□□□□ -0.18
ABCD4-208	ENST00000475240	SLC25A6	P12236	298 aa		13.9	□□□□□ -0.18
ABCD4-208	ENST00000475240	NKX2-1	P43699	371 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCD4-208	ENST00000475240	OR2F1	Q13607	317 aa		13.9	□□□□□ -0.18
ABCD4-208	ENST00000475240	DEDD2	Q8WXF8	326 aa		13.9	□□□□□ -0.18
ABCD4-208	ENST00000475240	PPP1R14B	Q96C90	147 aa		13.9	□□□□□ -0.18
ABCD4-208	ENST00000475240	TMED3	Q9Y3Q3	217 aa		13.9	□□□□□ -0.18
ABCD4-208	ENST00000475240	KMT2A	Q03164	3969 aa		13.9	□□□□□ -0.19
ABCD4-208	ENST00000475240	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCD4-208	ENST00000475240	SNRPGP15	A8MWD9	76 aa		13.89	□□□□□ -0.19
ABCD4-208	ENST00000475240	HLA-DRB4	P13762	266 aa		13.89	□□□□□ -0.19
ABCD4-208	ENST00000475240	PPP1R1A	Q13522	171 aa		13.89	□□□□□ -0.19
ABCD4-208	ENST00000475240	C1orf194	Q5T5A4	169 aa		13.89	□□□□□ -0.19
ABCD4-208	ENST00000475240		Q6ZTC4	211 aa		13.89	□□□□□ -0.19
ABCD4-208	ENST00000475240	CIB3	Q96Q77	187 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCD4-208	ENST00000475240	TRGV9	Q99603	122 aa		13.89	□□□□□ -0.19
ABCD4-208	ENST00000475240	HLA-DRB4	X5D2U9	266 aa		13.89	□□□□□ -0.19
ABCD4-208	ENST00000475240	TRAV10	A0A0B4J240	114 aa		13.88	□□□□□ -0.19
ABCD4-208	ENST00000475240	SFT2D2	O95562	160 aa		13.88	□□□□□ -0.19
ABCD4-208	ENST00000475240	ID1	P41134	155 aa		13.88	□□□□□ -0.19
ABCD4-208	ENST00000475240	RPP30	P78346	268 aa	Known RBP	13.88	□□□□□ -0.19
ABCD4-208	ENST00000475240	CCDC190	Q86UF4	302 aa		13.88	□□□□□ -0.19
ABCD4-208	ENST00000475240	COQ8A	Q8NI60	647 aa		13.88	□□□□□ -0.19
ABCD4-208	ENST00000475240	LINC00052	Q96N35	136 aa		13.88	□□□□□ -0.19
ABCD4-208	ENST00000475240	WDR12	Q9GZL7	423 aa	Known RBP	13.88	□□□□□ -0.19
ABCD4-208	ENST00000475240	MAGT1	Q9H0U3	335 aa		13.88	□□□□□ -0.19
ABCD4-208	ENST00000475240	SYNGR2	O43760	224 aa		13.87	□□□□□ -0.19
ABCD4-208	ENST00000475240	HOXB5	P09067	269 aa		13.87	□□□□□ -0.19
ABCD4-208	ENST00000475240	PSMB3	P49720	205 aa		13.87	□□□□□ -0.19
ABCD4-208	ENST00000475240	THAP8	Q8NA92	274 aa		13.87	□□□□□ -0.19
ABCD4-208	ENST00000475240	APLN	Q9ULZ1	77 aa		13.87	□□□□□ -0.19
ABCD4-208	ENST00000475240	FRAS1	Q86XX4	4008 aa		13.87	□□□□□ -0.19
ABCD4-208	ENST00000475240	IGKV1OR2-108	A0A075B7D4	117 aa		13.86	□□□□□ -0.19
ABCD4-208	ENST00000475240	WRB	O00258	174 aa		13.86	□□□□□ -0.19
ABCD4-208	ENST00000475240	IGKV3-20	P01619	116 aa		13.86	□□□□□ -0.19
ABCD4-208	ENST00000475240	DEFB1	P60022	68 aa		13.86	□□□□□ -0.19
ABCD4-208	ENST00000475240	SPANXN2	Q5MJ10	180 aa		13.86	□□□□□ -0.19
ABCD4-208	ENST00000475240	GDF5OS	Q5U4N7	250 aa		13.86	□□□□□ -0.19
ABCD4-208	ENST00000475240	FOXI2	Q6ZQN5	318 aa		13.86	□□□□□ -0.19
ABCD4-208	ENST00000475240	OR8I2	Q8N0Y5	310 aa		13.86	□□□□□ -0.19
ABCD4-208	ENST00000475240	SAV1	Q9H4B6	383 aa	Predicted RBP	13.86	□□□□□ -0.19
ABCD4-208	ENST00000475240	CELA1	Q9UNI1	258 aa		13.86	□□□□□ -0.19
ABCD4-208	ENST00000475240	CFD	P00746	253 aa	Predicted RBP	13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms