RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 C14orf105Q9NVL8 296 aa0.4□□□□□ -2.35
MDM2-216ENST00000471946 NOSIPQ9Y314 301 aaKnown RBP0.4□□□□□ -2.35
MDM2-216ENST00000471946 hCG_1818297A0A087WSY0 165 aa0.39□□□□□ -2.35
MDM2-216ENST00000471946 TRBV6-4A0A1B0GX49 114 aa0.39□□□□□ -2.35
MDM2-216ENST00000471946 A0A1W2PPM0 123 aa0.39□□□□□ -2.35
MDM2-216ENST00000471946 SMIM23A6NLE4 172 aa0.39□□□□□ -2.35
MDM2-216ENST00000471946 A8MT66 165 aa0.39□□□□□ -2.35
MDM2-216ENST00000471946 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
MDM2-216ENST00000471946 GADD45GO95257 159 aa0.39□□□□□ -2.35
MDM2-216ENST00000471946 RPS17P08708 135 aaKnown RBP0.39□□□□□ -2.35
MDM2-216ENST00000471946 SMIM17P0DL12 118 aa0.39□□□□□ -2.35
MDM2-216ENST00000471946 PSG9Q00887 426 aa0.39□□□□□ -2.35
MDM2-216ENST00000471946 PTRHD1Q6GMV3 140 aaKnown RBP0.39□□□□□ -2.35
MDM2-216ENST00000471946 SPATA8Q6RVD6 105 aa0.39□□□□□ -2.35
MDM2-216ENST00000471946 LCA10Q71F78 164 aa0.39□□□□□ -2.35
MDM2-216ENST00000471946 TRAPPC5Q8IUR0 188 aa0.39□□□□□ -2.35
MDM2-216ENST00000471946 SLAMF6Q96DU3 332 aa0.39□□□□□ -2.35
MDM2-216ENST00000471946 RTL1A6NKG5 1358 aa0.39□□□□□ -2.35
MDM2-216ENST00000471946 USP24Q9UPU5 2620 aa0.38□□□□□ -2.35
MDM2-216ENST00000471946 FRAS1Q86XX4 4008 aa0.38□□□□□ -2.35
MDM2-216ENST00000471946 KPNA3O00505 521 aaPredicted RBP0.38□□□□□ -2.35
MDM2-216ENST00000471946 CYB5BO43169 146 aa0.38□□□□□ -2.35
MDM2-216ENST00000471946 SERPINE1P05121 402 aa0.38□□□□□ -2.35
MDM2-216ENST00000471946 ANP32AP39687 249 aaKnown RBP0.38□□□□□ -2.35
MDM2-216ENST00000471946 DYNLT1P63172 113 aa0.38□□□□□ -2.35
MDM2-216ENST00000471946 SRSF6Q13247 344 aaKnown RBP0.38□□□□□ -2.35
MDM2-216ENST00000471946 LINC00322Q6ZN03 302 aaPredicted RBP0.38□□□□□ -2.35
MDM2-216ENST00000471946 OR6V1Q8N148 313 aa0.38□□□□□ -2.35
MDM2-216ENST00000471946 SLC30A7Q8NEW0 376 aa0.38□□□□□ -2.35
MDM2-216ENST00000471946 ITFG2Q969R8 447 aa0.38□□□□□ -2.35
MDM2-216ENST00000471946 BORCS7Q96B45 105 aa0.38□□□□□ -2.35
MDM2-216ENST00000471946 UCK1Q9HA47 277 aa0.38□□□□□ -2.35
MDM2-216ENST00000471946 ASCC3Q8N3C0 2202 aaKnown RBP0.38□□□□□ -2.35
MDM2-216ENST00000471946 ARHGEF11O15085 1522 aa0.38□□□□□ -2.35
MDM2-216ENST00000471946 TNS3Q68CZ2 1445 aa0.38□□□□□ -2.35
MDM2-216ENST00000471946 ADCY9O60503 1353 aa0.37□□□□□ -2.35
MDM2-216ENST00000471946 A0A087WUJ7 227 aa0.37□□□□□ -2.35
MDM2-216ENST00000471946 CCL16O15467 120 aa0.37□□□□□ -2.35
MDM2-216ENST00000471946 PPIBP23284 216 aaKnown RBP0.37□□□□□ -2.35
MDM2-216ENST00000471946 SRIP30626 198 aa0.37□□□□□ -2.35
MDM2-216ENST00000471946 RNASE4P34096 147 aaKnown RBP0.37□□□□□ -2.35
MDM2-216ENST00000471946 RANP62826 216 aaKnown RBP0.37□□□□□ -2.35
MDM2-216ENST00000471946 IAH1Q2TAA2 248 aaPredicted RBP0.37□□□□□ -2.35
MDM2-216ENST00000471946 TMEM254Q8TBM7 123 aa0.37□□□□□ -2.35
MDM2-216ENST00000471946 SLC25A40Q8TBP6 338 aa0.37□□□□□ -2.35
MDM2-216ENST00000471946 C2orf50Q96LR7 162 aa0.37□□□□□ -2.35
MDM2-216ENST00000471946 C10orf95Q9H7T3 257 aa0.37□□□□□ -2.35
MDM2-216ENST00000471946 TAS2R7Q9NYW3 318 aa0.37□□□□□ -2.35
MDM2-216ENST00000471946 CHCHD2Q9Y6H1 151 aaPredicted RBP0.37□□□□□ -2.35
MDM2-216ENST00000471946 CCDC144AA2RUR9 1427 aa0.37□□□□□ -2.35
MDM2-216ENST00000471946 DOCK4Q8N1I0 1966 aa0.36□□□□□ -2.35
MDM2-216ENST00000471946 APCP25054 2843 aa0.36□□□□□ -2.35
MDM2-216ENST00000471946 UNC13CQ8NB66 2214 aa0.36□□□□□ -2.35
MDM2-216ENST00000471946 SMIM9A6NGZ8 99 aa0.36□□□□□ -2.35
MDM2-216ENST00000471946 NIPSNAP2O75323 286 aa0.36□□□□□ -2.35
MDM2-216ENST00000471946 GKN2Q86XP6 184 aa0.36□□□□□ -2.35
MDM2-216ENST00000471946 Q8IYB0 196 aa0.36□□□□□ -2.35
MDM2-216ENST00000471946 ST6GALNAC3Q8NDV1 305 aa0.36□□□□□ -2.35
MDM2-216ENST00000471946 PLPP5Q8NEB5 264 aa0.36□□□□□ -2.35
MDM2-216ENST00000471946 FAM172AQ8WUF8 416 aa0.36□□□□□ -2.35
MDM2-216ENST00000471946 PRADC1Q9BSG0 188 aa0.36□□□□□ -2.35
MDM2-216ENST00000471946 RNASE7Q9H1E1 156 aaKnown RBP0.36□□□□□ -2.35
MDM2-216ENST00000471946 TLNRD1Q9H1K6 362 aa0.36□□□□□ -2.35
MDM2-216ENST00000471946 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.36□□□□□ -2.35
MDM2-216ENST00000471946 FBXO5Q9UKT4 447 aa0.36□□□□□ -2.35
MDM2-216ENST00000471946 PRELID3BQ9Y3B1 194 aa0.36□□□□□ -2.35
MDM2-216ENST00000471946 N4BP2Q86UW6 1770 aaPredicted RBP0.36□□□□□ -2.35
MDM2-216ENST00000471946 TIMM17BO60830 172 aa0.35□□□□□ -2.35
MDM2-216ENST00000471946 KLF7O75840 302 aaPredicted RBP0.35□□□□□ -2.35
MDM2-216ENST00000471946 DHFRP00374 187 aa0.35□□□□□ -2.35
MDM2-216ENST00000471946 C8GP07360 202 aa0.35□□□□□ -2.35
MDM2-216ENST00000471946 LSM6P62312 80 aaKnown RBP0.35□□□□□ -2.35
MDM2-216ENST00000471946 AESQ08117 197 aa0.35□□□□□ -2.35
MDM2-216ENST00000471946 OR8J2Q8NGG1 315 aa0.35□□□□□ -2.35
MDM2-216ENST00000471946 OR52L1Q8NGH7 329 aa0.35□□□□□ -2.35
MDM2-216ENST00000471946 OR51A2Q8NGJ7 313 aa0.35□□□□□ -2.35
MDM2-216ENST00000471946 TRIM4Q9C037 500 aa0.35□□□□□ -2.35
MDM2-216ENST00000471946 TMEM133Q9H2Q1 129 aa0.35□□□□□ -2.35
MDM2-216ENST00000471946 RNF122Q9H9V4 155 aa0.35□□□□□ -2.35
MDM2-216ENST00000471946 UQCC1Q9NVA1 299 aa0.35□□□□□ -2.35
MDM2-216ENST00000471946 IDI2-AS1Q9NZ38 188 aa0.35□□□□□ -2.35
MDM2-216ENST00000471946 TMEM14CQ9P0S9 112 aa0.35□□□□□ -2.35
MDM2-216ENST00000471946 CECR2Q9BXF3 1484 aa0.35□□□□□ -2.35
MDM2-216ENST00000471946 PTPRDP23468 1912 aa0.34□□□□□ -2.35
MDM2-216ENST00000471946 KCPQ6ZWJ8 1503 aa0.34□□□□□ -2.35
MDM2-216ENST00000471946 KDM6AO15550 1401 aaPredicted RBP0.34□□□□□ -2.36
MDM2-216ENST00000471946 PDE6DO43924 150 aa0.34□□□□□ -2.36
MDM2-216ENST00000471946 RPP14O95059 124 aaKnown RBP0.34□□□□□ -2.36
MDM2-216ENST00000471946 TCRBP04435 133 aa0.34□□□□□ -2.36
MDM2-216ENST00000471946 AP3S2P59780 193 aa0.34□□□□□ -2.36
MDM2-216ENST00000471946 EDDM3AQ14507 147 aa0.34□□□□□ -2.36
MDM2-216ENST00000471946 COL24A1Q17RW2 1714 aa0.34□□□□□ -2.36
MDM2-216ENST00000471946 Q6Q795 121 aa0.34□□□□□ -2.36
MDM2-216ENST00000471946 ARL5BQ96KC2 179 aa0.34□□□□□ -2.36
MDM2-216ENST00000471946 TVP23BQ9NYZ1 205 aa0.34□□□□□ -2.36
MDM2-216ENST00000471946 PLB1Q6P1J6 1458 aa0.34□□□□□ -2.36
MDM2-216ENST00000471946 MGAMO43451 1857 aa0.33□□□□□ -2.36
MDM2-216ENST00000471946 ZFYVE9O95405 1425 aa0.33□□□□□ -2.36
MDM2-216ENST00000471946 IGHV1-58A0A0C4DH39 117 aa0.33□□□□□ -2.36
MDM2-216ENST00000471946 TCRBV4S1A1TA0A5B7 111 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms