RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 ZNF546Q86UE3 836 aa12.16□□□□□ -0.46
GPC1-207ENST00000466624 TCTE3Q8IZS6 198 aa12.16□□□□□ -0.46
GPC1-207ENST00000466624 INO80EQ8NBZ0 244 aaPredicted RBP12.16□□□□□ -0.46
GPC1-207ENST00000466624 C20orf24Q9BUV8 137 aa12.16□□□□□ -0.46
GPC1-207ENST00000466624 MGAM2Q2M2H8 2515 aa12.16□□□□□ -0.46
GPC1-207ENST00000466624 WI2-2373I1.2A0A1W2PRP0 233 aa12.15□□□□□ -0.46
GPC1-207ENST00000466624 MPDU1O75352 247 aa12.15□□□□□ -0.46
GPC1-207ENST00000466624 IL4P05112 153 aa12.15□□□□□ -0.46
GPC1-207ENST00000466624 FOLR2P14207 255 aa12.15□□□□□ -0.46
GPC1-207ENST00000466624 CBLN1P23435 193 aa12.15□□□□□ -0.46
GPC1-207ENST00000466624 RAB31Q13636 194 aa12.15□□□□□ -0.46
GPC1-207ENST00000466624 TM4SF20Q53R12 229 aa12.15□□□□□ -0.46
GPC1-207ENST00000466624 CYP2G1PQ6ZSU1 146 aa12.15□□□□□ -0.46
GPC1-207ENST00000466624 BPIFCQ8NFQ6 507 aa12.15□□□□□ -0.46
GPC1-207ENST00000466624 RNF125Q96EQ8 232 aa12.15□□□□□ -0.46
GPC1-207ENST00000466624 ATP5SQ99766 215 aa12.15□□□□□ -0.46
GPC1-207ENST00000466624 UBE2L5PA0A1B0GUS4 154 aa12.14□□□□□ -0.47
GPC1-207ENST00000466624 A0A1B0GVG6 124 aa12.14□□□□□ -0.47
GPC1-207ENST00000466624 RNF222A6NCQ9 220 aa12.14□□□□□ -0.47
GPC1-207ENST00000466624 HMSDA8MTL9 139 aa12.14□□□□□ -0.47
GPC1-207ENST00000466624 IGLV1-51P01701 117 aa12.14□□□□□ -0.47
GPC1-207ENST00000466624 CLINT1Q14677 625 aa12.14□□□□□ -0.47
GPC1-207ENST00000466624 ADAMTSL5Q6ZMM2 481 aa12.14□□□□□ -0.47
GPC1-207ENST00000466624 AKAP14Q86UN6 197 aa12.14□□□□□ -0.47
GPC1-207ENST00000466624 OR2K2Q8NGT1 345 aa12.14□□□□□ -0.47
GPC1-207ENST00000466624 MGST2Q99735 147 aa12.14□□□□□ -0.47
GPC1-207ENST00000466624 PARD6GQ9BYG4 376 aaPredicted RBP12.14□□□□□ -0.47
GPC1-207ENST00000466624 TECRQ9NZ01 308 aaKnown RBP12.14□□□□□ -0.47
GPC1-207ENST00000466624 IGHV3OR16-8A0A075B7F1 116 aa12.13□□□□□ -0.47
GPC1-207ENST00000466624 IGHV7-4-1A0A0J9YVY3 117 aa12.13□□□□□ -0.47
GPC1-207ENST00000466624 SMLR1H3BR10 107 aa12.13□□□□□ -0.47
GPC1-207ENST00000466624 AGPAT2O15120 278 aa12.13□□□□□ -0.47
GPC1-207ENST00000466624 NPPCP23582 126 aa12.13□□□□□ -0.47
GPC1-207ENST00000466624 CRYBB3P26998 211 aa12.13□□□□□ -0.47
GPC1-207ENST00000466624 BMI1P35226 326 aa12.13□□□□□ -0.47
GPC1-207ENST00000466624 USF2Q15853 346 aaPredicted RBP12.13□□□□□ -0.47
GPC1-207ENST00000466624 OXLD1Q5BKU9 147 aa12.13□□□□□ -0.47
GPC1-207ENST00000466624 BTNL8Q6UX41 500 aa12.13□□□□□ -0.47
GPC1-207ENST00000466624 METTL26Q96S19 204 aa12.13□□□□□ -0.47
GPC1-207ENST00000466624 SMPXQ9UHP9 88 aa12.13□□□□□ -0.47
GPC1-207ENST00000466624 SLC45A2Q9UMX9 530 aa12.13□□□□□ -0.47
GPC1-207ENST00000466624 HNRNPCP07910 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
GPC1-207ENST00000466624 EDN2P20800 178 aa12.12□□□□□ -0.47
GPC1-207ENST00000466624 FGF7P21781 194 aa12.12□□□□□ -0.47
GPC1-207ENST00000466624 CAMLGP49069 296 aa12.12□□□□□ -0.47
GPC1-207ENST00000466624 PLP1P60201 277 aa12.12□□□□□ -0.47
GPC1-207ENST00000466624 OR2F1Q13607 317 aa12.12□□□□□ -0.47
GPC1-207ENST00000466624 ZNF345Q14585 488 aa12.12□□□□□ -0.47
GPC1-207ENST00000466624 PXDC1Q5TGL8 231 aa12.12□□□□□ -0.47
GPC1-207ENST00000466624 TMEM182Q6ZP80 229 aaPredicted RBP12.12□□□□□ -0.47
GPC1-207ENST00000466624 GGTLC1Q9BX51 225 aa12.12□□□□□ -0.47
GPC1-207ENST00000466624 WDR61Q9GZS3 305 aaKnown RBP12.12□□□□□ -0.47
GPC1-207ENST00000466624 ZMAT5Q9UDW3 170 aaKnown RBP12.12□□□□□ -0.47
GPC1-207ENST00000466624 FBXL17Q9UF56 701 aa12.12□□□□□ -0.47
GPC1-207ENST00000466624 U3KQE9 123 aa12.12□□□□□ -0.47
GPC1-207ENST00000466624 A0A1W2PS18 150 aa12.11□□□□□ -0.47
GPC1-207ENST00000466624 G3V4G9 280 aa12.11□□□□□ -0.47
GPC1-207ENST00000466624 ARPC5O15511 151 aa12.11□□□□□ -0.47
GPC1-207ENST00000466624 ZNF207O43670 478 aaKnown RBP12.11□□□□□ -0.47
GPC1-207ENST00000466624 IFNA5P01569 189 aa12.11□□□□□ -0.47
GPC1-207ENST00000466624 RPL29P47914 159 aaKnown RBP12.11□□□□□ -0.47
GPC1-207ENST00000466624 EIF2B2P49770 351 aaKnown RBP12.11□□□□□ -0.47
GPC1-207ENST00000466624 EGFEM1PQ0D2K5 195 aa12.11□□□□□ -0.47
GPC1-207ENST00000466624 ZNF266Q14584 549 aa12.11□□□□□ -0.47
GPC1-207ENST00000466624 OPCMLQ14982 345 aa12.11□□□□□ -0.47
GPC1-207ENST00000466624 KPRPQ5T749 579 aaPredicted RBP12.11□□□□□ -0.47
GPC1-207ENST00000466624 OR11H4Q8NGC9 324 aa12.11□□□□□ -0.47
GPC1-207ENST00000466624 DYNLRB2Q8TF09 96 aa12.11□□□□□ -0.47
GPC1-207ENST00000466624 NARS2Q96I59 477 aaKnown RBP12.11□□□□□ -0.47
GPC1-207ENST00000466624 NPCDR1Q9BY65 106 aa12.11□□□□□ -0.47
GPC1-207ENST00000466624 SMIM3Q9BZL3 60 aa12.11□□□□□ -0.47
GPC1-207ENST00000466624 TMEM231Q9H6L2 316 aa12.11□□□□□ -0.47
GPC1-207ENST00000466624 VSIRQ9H7M9 311 aa12.11□□□□□ -0.47
GPC1-207ENST00000466624 PFDN2Q9UHV9 154 aa12.11□□□□□ -0.47
GPC1-207ENST00000466624 RABAC1Q9UI14 185 aa12.11□□□□□ -0.47
GPC1-207ENST00000466624 CHEK1O14757 476 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 CD5P06127 495 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 LINC00869P0C866 280 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 GATA2P23769 480 aaPredicted RBP12.1□□□□□ -0.47
GPC1-207ENST00000466624 S100A7P31151 101 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 AP2S1P53680 142 aaPredicted RBP12.1□□□□□ -0.47
GPC1-207ENST00000466624 LYZP61626 148 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 PRR20EP86478 221 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 PRR20CP86479 221 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 PRR20DP86480 221 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 PRR20BP86481 221 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 PRR20AP86496 221 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 DEFB114Q30KQ6 69 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 NEURL2Q9BR09 285 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 PBDC1Q9BVG4 233 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 RHPN1-AS1Q9BWJ2 59 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 MFFQ9GZY8 342 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 WFDC1Q9HC57 220 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 KCNIP2Q9NS61 270 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 MLXQ9UH92 298 aa12.1□□□□□ -0.47
GPC1-207ENST00000466624 TRAV25A0A0B4J276 109 aa12.09□□□□□ -0.47
GPC1-207ENST00000466624 C17orf112F2Z3M2 114 aa12.09□□□□□ -0.47
GPC1-207ENST00000466624 TAAR5O14804 337 aa12.09□□□□□ -0.47
GPC1-207ENST00000466624 C1QBP02746 253 aa12.09□□□□□ -0.47
GPC1-207ENST00000466624 BEAN1Q3B7T3 259 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms