RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 CCNKO75909 580 aa14.97□□□□□ -0.01
COL9A3-204ENST00000463487 CST7O76096 145 aa14.97□□□□□ -0.01
COL9A3-204ENST00000463487 MPC2O95563 127 aa14.97□□□□□ -0.01
COL9A3-204ENST00000463487 S100A7P31151 101 aa14.97□□□□□ -0.01
COL9A3-204ENST00000463487 FCN2Q15485 313 aa14.97□□□□□ -0.01
COL9A3-204ENST00000463487 TEPPQ6URK8 271 aa14.97□□□□□ -0.01
COL9A3-204ENST00000463487 MRAPQ8TCY5 172 aa14.97□□□□□ -0.01
COL9A3-204ENST00000463487 PRR25Q96S07 402 aa14.97□□□□□ -0.01
COL9A3-204ENST00000463487 RHPN1-AS1Q9BWJ2 59 aa14.97□□□□□ -0.01
COL9A3-204ENST00000463487 IGKV1D-37A0A075B6S9 117 aa14.96□□□□□ -0.01
COL9A3-204ENST00000463487 CHEK1O14757 476 aa14.96□□□□□ -0.01
COL9A3-204ENST00000463487 CXCL3P19876 107 aa14.96□□□□□ -0.01
COL9A3-204ENST00000463487 EDN2P20800 178 aa14.96□□□□□ -0.01
COL9A3-204ENST00000463487 EIF2B2P49770 351 aaKnown RBP14.96□□□□□ -0.01
COL9A3-204ENST00000463487 SELENOTP62341 195 aa14.96□□□□□ -0.01
COL9A3-204ENST00000463487 FGL1Q08830 312 aa14.96□□□□□ -0.01
COL9A3-204ENST00000463487 RAB31Q13636 194 aa14.96□□□□□ -0.01
COL9A3-204ENST00000463487 GUCA2BQ16661 112 aa14.96□□□□□ -0.01
COL9A3-204ENST00000463487 TMEM217Q8N7C4 229 aa14.96□□□□□ -0.01
COL9A3-204ENST00000463487 BPIFCQ8NFQ6 507 aa14.96□□□□□ -0.01
COL9A3-204ENST00000463487 THAP6Q8TBB0 222 aa14.96□□□□□ -0.01
COL9A3-204ENST00000463487 RNF125Q96EQ8 232 aa14.96□□□□□ -0.01
COL9A3-204ENST00000463487 ZNF414Q96IQ9 312 aa14.96□□□□□ -0.01
COL9A3-204ENST00000463487 RABAC1Q9UI14 185 aa14.96□□□□□ -0.01
COL9A3-204ENST00000463487 SORL1Q92673 2214 aa14.95□□□□□ -0.02
COL9A3-204ENST00000463487 IGSF23A1L1A6 192 aa14.95□□□□□ -0.02
COL9A3-204ENST00000463487 HNRNPCP07910 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
COL9A3-204ENST00000463487 CRYBB3P26998 211 aa14.95□□□□□ -0.02
COL9A3-204ENST00000463487 ZNF90Q03938 601 aa14.95□□□□□ -0.02
COL9A3-204ENST00000463487 BAXQ07812 192 aa14.95□□□□□ -0.02
COL9A3-204ENST00000463487 ATP6V1FQ16864 119 aa14.95□□□□□ -0.02
COL9A3-204ENST00000463487 TMEM61Q8N0U2 210 aa14.95□□□□□ -0.02
COL9A3-204ENST00000463487 OR11H7Q8NGC8 314 aa14.95□□□□□ -0.02
COL9A3-204ENST00000463487 PBDC1Q9BVG4 233 aa14.95□□□□□ -0.02
COL9A3-204ENST00000463487 UQCC1Q9NVA1 299 aa14.95□□□□□ -0.02
COL9A3-204ENST00000463487 OR5AC2Q9NZP5 309 aa14.95□□□□□ -0.02
COL9A3-204ENST00000463487 IGKV1OR2-108A0A075B7D4 117 aa14.94□□□□□ -0.02
COL9A3-204ENST00000463487 IGHV3-49A0A0A0MS15 119 aa14.94□□□□□ -0.02
COL9A3-204ENST00000463487 WI2-2373I1.2A0A1W2PRP0 233 aa14.94□□□□□ -0.02
COL9A3-204ENST00000463487 GIPP09681 153 aaPredicted RBP14.94□□□□□ -0.02
COL9A3-204ENST00000463487 S100A7AQ86SG5 101 aa14.94□□□□□ -0.02
COL9A3-204ENST00000463487 SPAG8Q99932 426 aaPredicted RBP14.94□□□□□ -0.02
COL9A3-204ENST00000463487 TMEM147Q9BVK8 224 aa14.94□□□□□ -0.02
COL9A3-204ENST00000463487 IZUMO1RA6ND01 250 aa14.93□□□□□ -0.02
COL9A3-204ENST00000463487 TSPAN4O14817 238 aa14.93□□□□□ -0.02
COL9A3-204ENST00000463487 RAP2BP61225 183 aa14.93□□□□□ -0.02
COL9A3-204ENST00000463487 LYZP61626 148 aa14.93□□□□□ -0.02
COL9A3-204ENST00000463487 PAFAH1B2P68402 229 aa14.93□□□□□ -0.02
COL9A3-204ENST00000463487 EWSR1Q01844 656 aaKnown RBP eCLIP14.93□□□□□ -0.02
COL9A3-204ENST00000463487 ARL16Q0P5N6 197 aa14.93□□□□□ -0.02
COL9A3-204ENST00000463487 OR2F1Q13607 317 aa14.93□□□□□ -0.02
COL9A3-204ENST00000463487 CYP2G1PQ6ZSU1 146 aa14.93□□□□□ -0.02
COL9A3-204ENST00000463487 ZNF546Q86UE3 836 aa14.93□□□□□ -0.02
COL9A3-204ENST00000463487 WDR89Q96FK6 387 aaPredicted RBP14.93□□□□□ -0.02
COL9A3-204ENST00000463487 VSIRQ9H7M9 311 aa14.93□□□□□ -0.02
COL9A3-204ENST00000463487 OR4C46A6NHA9 309 aa14.92□□□□□ -0.02
COL9A3-204ENST00000463487 H0YIZ8 118 aa14.92□□□□□ -0.02
COL9A3-204ENST00000463487 USF2Q15853 346 aaPredicted RBP14.92□□□□□ -0.02
COL9A3-204ENST00000463487 DEFB121Q5J5C9 76 aa14.92□□□□□ -0.02
COL9A3-204ENST00000463487 ST8SIA2Q92186 375 aa14.92□□□□□ -0.02
COL9A3-204ENST00000463487 PPP1R14BQ96C90 147 aa14.92□□□□□ -0.02
COL9A3-204ENST00000463487 RNF2Q99496 336 aa14.92□□□□□ -0.02
COL9A3-204ENST00000463487 MBD2Q9UBB5 411 aa14.92□□□□□ -0.02
COL9A3-204ENST00000463487 IGHV3OR16-13A0A075B7E8 117 aa14.91□□□□□ -0.02
COL9A3-204ENST00000463487 IGHV3-74A0A0B4J1X5 117 aa14.91□□□□□ -0.02
COL9A3-204ENST00000463487 K7EIL1 84 aa14.91□□□□□ -0.02
COL9A3-204ENST00000463487 RPL11P62913 178 aaKnown RBP14.91□□□□□ -0.02
COL9A3-204ENST00000463487 RNF126Q9BV68 326 aa14.91□□□□□ -0.02
COL9A3-204ENST00000463487 SLC45A2Q9UMX9 530 aa14.91□□□□□ -0.02
COL9A3-204ENST00000463487 SMAD5-AS1Q9Y6J3 95 aa14.91□□□□□ -0.02
COL9A3-204ENST00000463487 HELTA6NFD8 242 aa14.9□□□□□ -0.02
COL9A3-204ENST00000463487 ZNF785A8K8V0 405 aa14.9□□□□□ -0.02
COL9A3-204ENST00000463487 RPL12P30050 165 aaKnown RBP14.9□□□□□ -0.02
COL9A3-204ENST00000463487 AP2S1P53680 142 aaPredicted RBP14.9□□□□□ -0.02
COL9A3-204ENST00000463487 VWC2Q2TAL6 325 aa14.9□□□□□ -0.02
COL9A3-204ENST00000463487 TCF24Q7RTU0 167 aa14.9□□□□□ -0.02
COL9A3-204ENST00000463487 OR5C1Q8NGR4 320 aa14.9□□□□□ -0.02
COL9A3-204ENST00000463487 RNF24Q9Y225 148 aa14.9□□□□□ -0.02
COL9A3-204ENST00000463487 SELENOKQ9Y6D0 94 aa14.9□□□□□ -0.02
COL9A3-204ENST00000463487 IGHV3-66A0A0C4DH42 116 aa14.89□□□□□ -0.03
COL9A3-204ENST00000463487 UBE2L5PA0A1B0GUS4 154 aa14.89□□□□□ -0.03
COL9A3-204ENST00000463487 MPDU1O75352 247 aa14.89□□□□□ -0.03
COL9A3-204ENST00000463487 APOHP02749 345 aaPredicted RBP14.89□□□□□ -0.03
COL9A3-204ENST00000463487 LINC00869P0C866 280 aa14.89□□□□□ -0.03
COL9A3-204ENST00000463487 CD81P60033 236 aa14.89□□□□□ -0.03
COL9A3-204ENST00000463487 NHLH2Q02577 135 aa14.89□□□□□ -0.03
COL9A3-204ENST00000463487 PXDC1Q5TGL8 231 aa14.89□□□□□ -0.03
COL9A3-204ENST00000463487 FBXL17Q9UF56 701 aa14.89□□□□□ -0.03
COL9A3-204ENST00000463487 WDR83OSQ9Y284 106 aa14.89□□□□□ -0.03
COL9A3-204ENST00000463487 LSM4Q9Y4Z0 139 aaKnown RBP14.89□□□□□ -0.03
COL9A3-204ENST00000463487 DNASE2O00115 360 aaPredicted RBP14.88□□□□□ -0.03
COL9A3-204ENST00000463487 AGPAT2O15120 278 aa14.88□□□□□ -0.03
COL9A3-204ENST00000463487 LYL1P12980 280 aa14.88□□□□□ -0.03
COL9A3-204ENST00000463487 ORM2P19652 201 aa14.88□□□□□ -0.03
COL9A3-204ENST00000463487 CAMLGP49069 296 aa14.88□□□□□ -0.03
COL9A3-204ENST00000463487 OR1B1Q8NGR6 318 aa14.88□□□□□ -0.03
COL9A3-204ENST00000463487 NEURL2Q9BR09 285 aa14.88□□□□□ -0.03
COL9A3-204ENST00000463487 U3KQE9 123 aa14.88□□□□□ -0.03
COL9A3-204ENST00000463487 DFFBO76075 338 aa14.87□□□□□ -0.03
COL9A3-204ENST00000463487 CMC4P56277 68 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms