RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 LINC00854A0A1B0GVQ3 168 aa12.01□□□□□ -0.49
NCKIPSD-208ENST00000454134 ZNF701M0R085 212 aaPredicted RBP12.01□□□□□ -0.49
NCKIPSD-208ENST00000454134 BUB3O43684 328 aa12.01□□□□□ -0.49
NCKIPSD-208ENST00000454134 HOXB5P09067 269 aa12.01□□□□□ -0.49
NCKIPSD-208ENST00000454134 GIG44P09565 113 aaPredicted RBP12.01□□□□□ -0.49
NCKIPSD-208ENST00000454134 ATF4P18848 351 aaPredicted RBP12.01□□□□□ -0.49
NCKIPSD-208ENST00000454134 GPX4P36969 197 aaPredicted RBP12.01□□□□□ -0.49
NCKIPSD-208ENST00000454134 ZNF90Q03938 601 aa12.01□□□□□ -0.49
NCKIPSD-208ENST00000454134 BAK1Q16611 211 aa12.01□□□□□ -0.49
NCKIPSD-208ENST00000454134 PSMG4Q5JS54 123 aa12.01□□□□□ -0.49
NCKIPSD-208ENST00000454134 DEDD2Q8WXF8 326 aa12.01□□□□□ -0.49
NCKIPSD-208ENST00000454134 SLC35E1Q96K37 410 aa12.01□□□□□ -0.49
NCKIPSD-208ENST00000454134 SLC25A6P12236 298 aa12□□□□□ -0.49
NCKIPSD-208ENST00000454134 INPP1P49441 399 aa12□□□□□ -0.49
NCKIPSD-208ENST00000454134 AP2S1P53680 142 aaPredicted RBP12□□□□□ -0.49
NCKIPSD-208ENST00000454134 ATP5IP56385 69 aaPredicted RBP12□□□□□ -0.49
NCKIPSD-208ENST00000454134 RNF125Q96EQ8 232 aa12□□□□□ -0.49
NCKIPSD-208ENST00000454134 TMED3Q9Y3Q3 217 aa12□□□□□ -0.49
NCKIPSD-208ENST00000454134 FAM90A26D6RGX4 464 aa11.99□□□□□ -0.49
NCKIPSD-208ENST00000454134 WRBO00258 174 aa11.99□□□□□ -0.49
NCKIPSD-208ENST00000454134 LY6G6CO95867 125 aa11.99□□□□□ -0.49
NCKIPSD-208ENST00000454134 C4BPBP20851 252 aa11.99□□□□□ -0.49
NCKIPSD-208ENST00000454134 NANOS2P60321 138 aaKnown RBP11.99□□□□□ -0.49
NCKIPSD-208ENST00000454134 RAB11AP62491 216 aa11.99□□□□□ -0.49
NCKIPSD-208ENST00000454134 OR2F1Q13607 317 aa11.99□□□□□ -0.49
NCKIPSD-208ENST00000454134 GGNBP1Q5YKI7 109 aa11.99□□□□□ -0.49
NCKIPSD-208ENST00000454134 TRIQKQ629K1 86 aa11.99□□□□□ -0.49
NCKIPSD-208ENST00000454134 SIGLEC15Q6ZMC9 328 aa11.99□□□□□ -0.49
NCKIPSD-208ENST00000454134 PHLDA1Q8WV24 401 aaPredicted RBP11.99□□□□□ -0.49
NCKIPSD-208ENST00000454134 LINC00476Q8WZB0 136 aa11.99□□□□□ -0.49
NCKIPSD-208ENST00000454134 RAB40CQ96S21 281 aa11.99□□□□□ -0.49
NCKIPSD-208ENST00000454134 FLVCR2Q9UPI3 526 aa11.99□□□□□ -0.49
NCKIPSD-208ENST00000454134 MED6O75586 246 aa11.98□□□□□ -0.49
NCKIPSD-208ENST00000454134 ADAP1O75689 374 aa11.98□□□□□ -0.49
NCKIPSD-208ENST00000454134 LYZP61626 148 aa11.98□□□□□ -0.49
NCKIPSD-208ENST00000454134 SDHCQ99643 169 aaPredicted RBP11.98□□□□□ -0.49
NCKIPSD-208ENST00000454134 C11orf68Q9H3H3 251 aaKnown RBP11.98□□□□□ -0.49
NCKIPSD-208ENST00000454134 NRN1Q9NPD7 142 aa11.98□□□□□ -0.49
NCKIPSD-208ENST00000454134 CLEC5AQ9NY25 188 aa11.98□□□□□ -0.49
NCKIPSD-208ENST00000454134 FBXL17Q9UF56 701 aa11.98□□□□□ -0.49
NCKIPSD-208ENST00000454134 KLK5Q9Y337 293 aaPredicted RBP11.98□□□□□ -0.49
NCKIPSD-208ENST00000454134 HYDINQ4G0P3 5121 aa11.98□□□□□ -0.49
NCKIPSD-208ENST00000454134 ALMS1Q8TCU4 4167 aa11.97□□□□□ -0.49
NCKIPSD-208ENST00000454134 IGKV1OR2-108A0A075B7D4 117 aa11.97□□□□□ -0.49
NCKIPSD-208ENST00000454134 C9orf170A2RU37 121 aa11.97□□□□□ -0.49
NCKIPSD-208ENST00000454134 H3BP45 60 aa11.97□□□□□ -0.49
NCKIPSD-208ENST00000454134 SYNGR2O43760 224 aa11.97□□□□□ -0.49
NCKIPSD-208ENST00000454134 NDUFB6O95139 128 aa11.97□□□□□ -0.49
NCKIPSD-208ENST00000454134 SPP1P10451 314 aa11.97□□□□□ -0.49
NCKIPSD-208ENST00000454134 PLECQ15149 4684 aaKnown RBP11.97□□□□□ -0.49
NCKIPSD-208ENST00000454134 MORN3Q6PF18 240 aaPredicted RBP11.97□□□□□ -0.49
NCKIPSD-208ENST00000454134 GSG1LQ6UXU4 331 aa11.97□□□□□ -0.49
NCKIPSD-208ENST00000454134 C11orf45Q8TAV5 145 aa11.97□□□□□ -0.49
NCKIPSD-208ENST00000454134 UBE2MP61081 183 aaKnown RBP11.96□□□□□ -0.49
NCKIPSD-208ENST00000454134 SNRPD3P62318 126 aaKnown RBP11.96□□□□□ -0.49
NCKIPSD-208ENST00000454134 SPANXN5Q5MJ07 72 aa11.96□□□□□ -0.49
NCKIPSD-208ENST00000454134 OR8G2PQ6IF36 304 aa11.96□□□□□ -0.49
NCKIPSD-208ENST00000454134 Q8NAQ8 132 aa11.96□□□□□ -0.49
NCKIPSD-208ENST00000454134 CIB3Q96Q77 187 aaPredicted RBP11.96□□□□□ -0.49
NCKIPSD-208ENST00000454134 TRGV9Q99603 122 aa11.96□□□□□ -0.49
NCKIPSD-208ENST00000454134 NAP1L6A6NFF2 107 aa11.95□□□□□ -0.5
NCKIPSD-208ENST00000454134 SNRPGP15A8MWD9 76 aa11.95□□□□□ -0.5
NCKIPSD-208ENST00000454134 PRSS46E5RG02 174 aa11.95□□□□□ -0.5
NCKIPSD-208ENST00000454134 FABP1P07148 127 aa11.95□□□□□ -0.5
NCKIPSD-208ENST00000454134 RBMY1A1P0DJD3 496 aaKnown RBP11.95□□□□□ -0.5
NCKIPSD-208ENST00000454134 RBMY1CP0DJD4 496 aa11.95□□□□□ -0.5
NCKIPSD-208ENST00000454134 ANXA7P20073 488 aaKnown RBP11.95□□□□□ -0.5
NCKIPSD-208ENST00000454134 DEFB1P60022 68 aa11.95□□□□□ -0.5
NCKIPSD-208ENST00000454134 RBMY1FQ15415 496 aaKnown RBP11.95□□□□□ -0.5
NCKIPSD-208ENST00000454134 THAP8Q8NA92 274 aa11.95□□□□□ -0.5
NCKIPSD-208ENST00000454134 WDR12Q9GZL7 423 aaKnown RBP11.95□□□□□ -0.5
NCKIPSD-208ENST00000454134 IGHV4-28A0A0C4DH34 117 aa11.94□□□□□ -0.5
NCKIPSD-208ENST00000454134 BTCP35070 178 aa11.94□□□□□ -0.5
NCKIPSD-208ENST00000454134 NUP62P37198 522 aaPredicted RBP11.94□□□□□ -0.5
NCKIPSD-208ENST00000454134 POLR2GP62487 172 aaKnown RBP eCLIP11.94□□□□□ -0.5
NCKIPSD-208ENST00000454134 RPP30P78346 268 aaKnown RBP11.94□□□□□ -0.5
NCKIPSD-208ENST00000454134 TMEM41BQ5BJD5 291 aa11.94□□□□□ -0.5
NCKIPSD-208ENST00000454134 PPP1R14BQ96C90 147 aa11.94□□□□□ -0.5
NCKIPSD-208ENST00000454134 MFFQ9GZY8 342 aa11.94□□□□□ -0.5
NCKIPSD-208ENST00000454134 PFDN2Q9UHV9 154 aa11.94□□□□□ -0.5
NCKIPSD-208ENST00000454134 H3BMM0 161 aa11.93□□□□□ -0.5
NCKIPSD-208ENST00000454134 OR4E1P0C645 316 aa11.93□□□□□ -0.5
NCKIPSD-208ENST00000454134 IL7P13232 177 aa11.93□□□□□ -0.5
NCKIPSD-208ENST00000454134 ID3Q02535 119 aa11.93□□□□□ -0.5
NCKIPSD-208ENST00000454134 CSNK1G2-AS1Q8NCQ2 148 aa11.93□□□□□ -0.5
NCKIPSD-208ENST00000454134 COQ8AQ8NI60 647 aa11.93□□□□□ -0.5
NCKIPSD-208ENST00000454134 LINC00052Q96N35 136 aa11.93□□□□□ -0.5
NCKIPSD-208ENST00000454134 SEPSECSQ9HD40 501 aaKnown RBP11.93□□□□□ -0.5
NCKIPSD-208ENST00000454134 STRAPQ9Y3F4 350 aaKnown RBP11.93□□□□□ -0.5
NCKIPSD-208ENST00000454134 X6R8D5 127 aa11.93□□□□□ -0.5
NCKIPSD-208ENST00000454134 ZNF705EA8MWA4 302 aaPredicted RBP11.92□□□□□ -0.5
NCKIPSD-208ENST00000454134 IGKV3-20P01619 116 aa11.92□□□□□ -0.5
NCKIPSD-208ENST00000454134 GATA2P23769 480 aaPredicted RBP11.92□□□□□ -0.5
NCKIPSD-208ENST00000454134 C4orf46Q504U0 113 aa11.92□□□□□ -0.5
NCKIPSD-208ENST00000454134 C1orf194Q5T5A4 169 aa11.92□□□□□ -0.5
NCKIPSD-208ENST00000454134 GDF5OSQ5U4N7 250 aa11.92□□□□□ -0.5
NCKIPSD-208ENST00000454134 TMEM182Q6ZP80 229 aaPredicted RBP11.92□□□□□ -0.5
NCKIPSD-208ENST00000454134 ACOT7LQ6ZUV0 252 aa11.92□□□□□ -0.5
NCKIPSD-208ENST00000454134 OR8I2Q8N0Y5 310 aa11.92□□□□□ -0.5
NCKIPSD-208ENST00000454134 XCL2Q9UBD3 114 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms