RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 OR1S2Q8NGQ3 325 aa6.58□□□□□ -1.36
SMPD4-208ENST00000439029 OR6F1Q8NGZ6 308 aa6.58□□□□□ -1.36
SMPD4-208ENST00000439029 MRGPRFQ96AM1 343 aa6.58□□□□□ -1.36
SMPD4-208ENST00000439029 SEC22AQ96IW7 307 aa6.58□□□□□ -1.36
SMPD4-208ENST00000439029 PBDC1Q9BVG4 233 aa6.58□□□□□ -1.36
SMPD4-208ENST00000439029 CCDC90BQ9GZT6 254 aa6.58□□□□□ -1.36
SMPD4-208ENST00000439029 FKBP14Q9NWM8 211 aa6.58□□□□□ -1.36
SMPD4-208ENST00000439029 TRAV30A0A087WSZ9 112 aa6.57□□□□□ -1.36
SMPD4-208ENST00000439029 A0A096LPF7 62 aa6.57□□□□□ -1.36
SMPD4-208ENST00000439029 NPIPB6E9PJ23 425 aa6.57□□□□□ -1.36
SMPD4-208ENST00000439029 UCP1P25874 307 aa6.57□□□□□ -1.36
SMPD4-208ENST00000439029 SPATA31B1PQ5VZV4 182 aa6.57□□□□□ -1.36
SMPD4-208ENST00000439029 ZFP1Q6P2D0 407 aa6.57□□□□□ -1.36
SMPD4-208ENST00000439029 TMED4Q7Z7H5 227 aa6.57□□□□□ -1.36
SMPD4-208ENST00000439029 ZNF2Q9BSG1 426 aaPredicted RBP6.57□□□□□ -1.36
SMPD4-208ENST00000439029 KRTAP9-2Q9BYQ4 174 aa6.57□□□□□ -1.36
SMPD4-208ENST00000439029 SLC25A39Q9BZJ4 359 aaPredicted RBP6.57□□□□□ -1.36
SMPD4-208ENST00000439029 PLCXD1Q9NUJ7 323 aa6.57□□□□□ -1.36
SMPD4-208ENST00000439029 DAPK2Q9UIK4 370 aa6.57□□□□□ -1.36
SMPD4-208ENST00000439029 TIMM8BQ9Y5J9 83 aaPredicted RBP6.57□□□□□ -1.36
SMPD4-208ENST00000439029 TRAV18A0A075B6X5 111 aa6.56□□□□□ -1.36
SMPD4-208ENST00000439029 CORTO00230 105 aa6.56□□□□□ -1.36
SMPD4-208ENST00000439029 GSTZ1O43708 216 aaPredicted RBP6.56□□□□□ -1.36
SMPD4-208ENST00000439029 RFX2P48378 723 aa6.56□□□□□ -1.36
SMPD4-208ENST00000439029 CNN1P51911 297 aaKnown RBP6.56□□□□□ -1.36
SMPD4-208ENST00000439029 SUB1P53999 127 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMPD4-208ENST00000439029 KRTAP10-4P60372 401 aaPredicted RBP6.56□□□□□ -1.36
SMPD4-208ENST00000439029 YPEL3P61236 119 aaPredicted RBP6.56□□□□□ -1.36
SMPD4-208ENST00000439029 IGFL4Q6B9Z1 124 aa6.56□□□□□ -1.36
SMPD4-208ENST00000439029 PRSS54Q6PEW0 395 aa6.56□□□□□ -1.36
SMPD4-208ENST00000439029 TMEM144Q7Z5S9 345 aa6.56□□□□□ -1.36
SMPD4-208ENST00000439029 OR10J6PQ8NGY7 276 aa6.56□□□□□ -1.36
SMPD4-208ENST00000439029 VSIG2Q96IQ7 327 aa6.56□□□□□ -1.36
SMPD4-208ENST00000439029 RPRMQ9NS64 109 aa6.56□□□□□ -1.36
SMPD4-208ENST00000439029 EHFQ9NZC4 300 aa6.56□□□□□ -1.36
SMPD4-208ENST00000439029 MSRB1Q9NZV6 116 aa6.56□□□□□ -1.36
SMPD4-208ENST00000439029 GPR31O00270 319 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 NXPH3O95157 252 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 PMP2P02689 132 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 RD3LP0DJH9 198 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 RAB3BP20337 219 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 HSPA13P48723 471 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 TRAM1Q15629 374 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 CMTM1Q8IZ96 169 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 C8orf59Q8N0T1 100 aaPredicted RBP6.55□□□□□ -1.36
SMPD4-208ENST00000439029 DHRSXQ8N5I4 330 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 OR5AP2Q8NGF4 316 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 NPIPB3Q92617 1050 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 C16orf74Q96GX8 76 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 ACY3Q96HD9 319 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 C16orf92Q96LL3 132 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 FXYD6Q9H0Q3 95 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 TMPRSS5Q9H3S3 457 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 ENY2Q9NPA8 101 aa6.55□□□□□ -1.36
SMPD4-208ENST00000439029 A0A0B4J293 547 aa6.54□□□□□ -1.36
SMPD4-208ENST00000439029 ISLRO14498 428 aa6.54□□□□□ -1.36
SMPD4-208ENST00000439029 PSG1P11464 419 aa6.54□□□□□ -1.36
SMPD4-208ENST00000439029 PSMA1P25786 263 aaKnown RBP6.54□□□□□ -1.36
SMPD4-208ENST00000439029 RPL5P46777 297 aaKnown RBP6.54□□□□□ -1.36
SMPD4-208ENST00000439029 TAS2R60P59551 318 aa6.54□□□□□ -1.36
SMPD4-208ENST00000439029 GPR141Q7Z602 305 aa6.54□□□□□ -1.36
SMPD4-208ENST00000439029 TBC1D26Q86UD7 250 aa6.54□□□□□ -1.36
SMPD4-208ENST00000439029 BORCS5Q969J3 196 aa6.54□□□□□ -1.36
SMPD4-208ENST00000439029 S100A14Q9HCY8 104 aa6.54□□□□□ -1.36
SMPD4-208ENST00000439029 ACOT13Q9NPJ3 140 aa6.54□□□□□ -1.36
SMPD4-208ENST00000439029 TRAV1-2A0A0B4J238 106 aa6.53□□□□□ -1.36
SMPD4-208ENST00000439029 LRCOL1A6NCL2 159 aa6.53□□□□□ -1.36
SMPD4-208ENST00000439029 A8MTW9 85 aa6.53□□□□□ -1.36
SMPD4-208ENST00000439029 PSCAO43653 123 aa6.53□□□□□ -1.36
SMPD4-208ENST00000439029 TOMM40O96008 361 aa6.53□□□□□ -1.36
SMPD4-208ENST00000439029 IGKV1-5P01602 117 aa6.53□□□□□ -1.36
SMPD4-208ENST00000439029 MYL9P24844 172 aa6.53□□□□□ -1.36
SMPD4-208ENST00000439029 B2MP61769 119 aa6.53□□□□□ -1.36
SMPD4-208ENST00000439029 RNF182Q8N6D2 247 aa6.53□□□□□ -1.36
SMPD4-208ENST00000439029 RNASE8Q8TDE3 154 aaKnown RBP6.53□□□□□ -1.36
SMPD4-208ENST00000439029 NTN5Q8WTR8 489 aaPredicted RBP6.53□□□□□ -1.36
SMPD4-208ENST00000439029 PDCD10Q9BUL8 212 aa6.53□□□□□ -1.36
SMPD4-208ENST00000439029 RRP15Q9Y3B9 282 aaKnown RBP6.53□□□□□ -1.36
SMPD4-208ENST00000439029 TNXBP22105 4242 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 INS-IGF2F8WCM5 200 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 H3BNG1 76 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 BOLA2-SMG1P6H3BVE0 249 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 RLN2P04090 185 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 CBX5P45973 191 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 TAS2R20P59543 309 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 RHOBP62745 196 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 MLLT11Q13015 90 aaPredicted RBP6.52□□□□□ -1.37
SMPD4-208ENST00000439029 LINC01620Q4KN68 170 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 SFXN4Q6P4A7 337 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 DHRS11Q6UWP2 260 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 SCXQ7RTU7 201 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 OR8I2Q8N0Y5 310 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 ARRDC1Q8N5I2 433 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 LINC00612Q8N6U2 182 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 Q8N814 137 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 PPP1R14BQ96C90 147 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 RHBDL2Q9NX52 303 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 LY96Q9Y6Y9 160 aa6.52□□□□□ -1.37
SMPD4-208ENST00000439029 TRAV9-2A0A087WT02 112 aa6.51□□□□□ -1.37
SMPD4-208ENST00000439029 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms