RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 EFNB3Q15768 340 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 PAX4O43316 350 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 CCL1P22362 96 aa9.67□□□□□ -0.86
PTCH1-209ENST00000437951 TRAV8-3A0A0A6YYJ7 113 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 IGHV1OR15-9A0A0B4J2B8 117 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 ACYP1P07311 99 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 DOCK4Q8N1I0 1966 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 YPEL1O60688 119 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 DRD3P35462 400 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 CDKN1BP46527 198 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 YPEL2Q96QA6 119 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 AMELYQ99218 206 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 EVI2AP22794 236 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 BHLHA9Q7RTU4 235 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 IGHV5-10-1A0A0J9YXX1 117 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 B9A039 149 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 OR13A1Q8NGR1 328 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 WNK3Q9BYP7 1800 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 IGHV1-24A0A0C4DH33 117 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 K7EP13 123 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 A0A0G2JK05 382 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 BTCP35070 178 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 IGHV1-45A0A0A0MS14 117 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 C3orf79P0CE67 100 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 PILRAQ9UKJ1 303 aa9.66□□□□□ -0.86
PTCH1-209ENST00000437951 TRBV6-7A0A0A0MS04 114 aa9.65□□□□□ -0.86
PTCH1-209ENST00000437951 D6R8Y8 96 aa9.65□□□□□ -0.86
PTCH1-209ENST00000437951 TAL2Q16559 108 aa9.65□□□□□ -0.86
PTCH1-209ENST00000437951 OR11H6Q8NGC7 330 aa9.65□□□□□ -0.86
PTCH1-209ENST00000437951 RNF125Q96EQ8 232 aa9.65□□□□□ -0.86
PTCH1-209ENST00000437951 Q6ZS52 159 aa9.65□□□□□ -0.86
PTCH1-209ENST00000437951 REG4Q9BYZ8 158 aa9.65□□□□□ -0.86
PTCH1-209ENST00000437951 RNF115Q9Y4L5 304 aa9.65□□□□□ -0.86
PTCH1-209ENST00000437951 LINC00312Q9Y6C7 94 aa9.65□□□□□ -0.86
PTCH1-209ENST00000437951 LYPD1Q8N2G4 141 aa9.65□□□□□ -0.86
PTCH1-209ENST00000437951 KLHDC3Q9BQ90 382 aa9.65□□□□□ -0.86
PTCH1-209ENST00000437951 DPM3Q9P2X0 92 aa9.65□□□□□ -0.86
PTCH1-209ENST00000437951 RPL39P5Q59GN2 51 aa9.65□□□□□ -0.87
PTCH1-209ENST00000437951 LINC01551Q86U37 167 aa9.65□□□□□ -0.87
PTCH1-209ENST00000437951 TSSC4Q9Y5U2 329 aaPredicted RBP9.65□□□□□ -0.87
PTCH1-209ENST00000437951 SLAQ13239 276 aa9.65□□□□□ -0.87
PTCH1-209ENST00000437951 LY6G6FQ5SQ64 297 aa9.65□□□□□ -0.87
PTCH1-209ENST00000437951 C9orf50Q5SZB4 431 aa9.64□□□□□ -0.87
PTCH1-209ENST00000437951 SPATA31B1PQ5VZV4 182 aa9.64□□□□□ -0.87
PTCH1-209ENST00000437951 C1orf162Q8NEQ5 155 aaPredicted RBP9.64□□□□□ -0.87
PTCH1-209ENST00000437951 PRADC1Q9BSG0 188 aa9.64□□□□□ -0.87
PTCH1-209ENST00000437951 TIMM21Q9BVV7 248 aa9.64□□□□□ -0.87
PTCH1-209ENST00000437951 C1QTNF4Q9BXJ3 329 aa9.64□□□□□ -0.87
PTCH1-209ENST00000437951 STPG1Q5TH74 334 aa9.64□□□□□ -0.87
PTCH1-209ENST00000437951 NHSL1Q5SYE7 1610 aa9.64□□□□□ -0.87
PTCH1-209ENST00000437951 A0A1B0GWJ7 208 aa9.64□□□□□ -0.87
PTCH1-209ENST00000437951 SIVA1O15304 175 aa9.64□□□□□ -0.87
PTCH1-209ENST00000437951 hDV102S1A0JD36 115 aa9.64□□□□□ -0.87
PTCH1-209ENST00000437951 ZNF826PQ6ZT77 177 aa9.64□□□□□ -0.87
PTCH1-209ENST00000437951 C17orf98A8MV24 154 aa9.64□□□□□ -0.87
PTCH1-209ENST00000437951 PRCDQ00LT1 54 aa9.64□□□□□ -0.87
PTCH1-209ENST00000437951 ID3Q02535 119 aa9.64□□□□□ -0.87
PTCH1-209ENST00000437951 C1orf43Q9BWL3 253 aa9.64□□□□□ -0.87
PTCH1-209ENST00000437951 GREM1O60565 184 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 TMEM141Q96I45 108 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 GPHA2Q96T91 129 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 CRIM1Q9NZV1 1036 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 FAM231BA6NCW3 169 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 J3KT08 172 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 FOXS1O43638 330 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 RPUSD1Q9UJJ7 312 aaKnown RBP9.63□□□□□ -0.87
PTCH1-209ENST00000437951 DTX4Q9Y2E6 619 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 IGKV3D-20A0A0C4DH25 116 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 C12orf77C9JDV5 145 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 PTPRDP23468 1912 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 PEBP1P30086 187 aaKnown RBP9.63□□□□□ -0.87
PTCH1-209ENST00000437951 FAM219BQ5XKK7 198 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 SPSB2Q99619 263 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 COL18A1P39060 1754 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 ROS1P08922 2347 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 FNDC10F2Z333 226 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 GNG5P63218 68 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 ANAPC10Q9UM13 185 aa9.63□□□□□ -0.87
PTCH1-209ENST00000437951 IGHV2-70P01814 119 aa9.62□□□□□ -0.87
PTCH1-209ENST00000437951 AZU1P20160 251 aa9.62□□□□□ -0.87
PTCH1-209ENST00000437951 UBE2DNLQ8IWF7 75 aa9.62□□□□□ -0.87
PTCH1-209ENST00000437951 CENPVL1A0A0U1RR11 272 aa9.62□□□□□ -0.87
PTCH1-209ENST00000437951 ZIC4Q8N9L1 334 aa9.62□□□□□ -0.87
PTCH1-209ENST00000437951 NUP35Q8NFH5 326 aa9.62□□□□□ -0.87
PTCH1-209ENST00000437951 C1QTNF5Q9BXJ0 243 aa9.62□□□□□ -0.87
PTCH1-209ENST00000437951 TCTEX1D4Q5JR98 221 aa9.62□□□□□ -0.87
PTCH1-209ENST00000437951 RALGAPA2Q2PPJ7 1873 aa9.62□□□□□ -0.87
PTCH1-209ENST00000437951 ITLN2Q8WWU7 325 aaPredicted RBP9.62□□□□□ -0.87
PTCH1-209ENST00000437951 ANKRD29Q8N6D5 301 aa9.62□□□□□ -0.87
PTCH1-209ENST00000437951 A0A1W2PPM0 123 aa9.62□□□□□ -0.87
PTCH1-209ENST00000437951 IGKV3-20P01619 116 aa9.62□□□□□ -0.87
PTCH1-209ENST00000437951 TFF2Q03403 129 aa9.62□□□□□ -0.87
PTCH1-209ENST00000437951 LINC01545Q5VT33 79 aa9.62□□□□□ -0.87
PTCH1-209ENST00000437951 STHQ8IWL8 128 aa9.62□□□□□ -0.87
PTCH1-209ENST00000437951 WDR83OSQ9Y284 106 aa9.61□□□□□ -0.87
PTCH1-209ENST00000437951 ARID2Q68CP9 1835 aa9.61□□□□□ -0.87
PTCH1-209ENST00000437951 GLRXP35754 106 aa9.61□□□□□ -0.87
PTCH1-209ENST00000437951 LAIR2Q6ISS4 152 aa9.61□□□□□ -0.87
PTCH1-209ENST00000437951 ZNF497Q6ZNH5 498 aa9.61□□□□□ -0.87
PTCH1-209ENST00000437951 FREM1Q5H8C1 2179 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms